Search Info:

Sequence: AA$

Click on Id to open Simulation Metadata and Analyses

Id. PDB Type SubType ForceField Solvent Description Time (ns) Sequence
Id. PDB Type SubType ForceField Solvent Description Time (ns) Sequence
NAFlex_lks1 NONE Dna B parmBSC1 TIP3P DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral 1,000 GCCTATAAACGCCTATAA
NAFlex_Naked_RNA_RNA NONE Rna A parmBSC1 SPCE RNA-A Duplex Naked SPC/E AddedSalt 250 CGCGAA
NAFlex_Naked_DNA_DNA NONE Dna B parmBSC1 SPCE DNA-B Duplex Naked SPC/E AddedSalt 250 CGCGAA
NAFlex_Naked_DNA_RNA NONE Rna B parmBSC1 SPCE -B Duplex Naked SPC/E AddedSalt 250 CGCGAA
NAFlex_apsAAT NONE Dna Anti parallel triplex AAT parmBSC1 TIP3P DNA Triplex Naked ParmBSC1 TIP3P Electroneutral 240 AAAAAAAAAA | TTTTTTTTTT | AAAAAAAAAA
NAFlex_rna1 NONE Rna A parmBSC0 TIP3P RNA-A Duplex Naked ParmBSC0 TIP3P Electroneutral 200 GCCUAUAAACGCCUAUAA
NAFlex_gcf1p_1pro_1 1PRO Prot-Dna B parmBSC1 TIP3P -B Duplex Naked TIP3P Electroneutral 200 TATATAATATAATATATATATATATAAA
NAFlex_TF_3v79_10_dna_wholeA - Dna B parmBSC1 TIP3P DNA-B Duplex Naked TIP3P Electroneutral 200 GTTACTGTGXGAAAGAAA
NAFlex_TF_3v79_10_dna_wholeB - Dna B parmBSC1 TIP3P DNA-B Duplex Naked TIP3P Electroneutral 200 GTTACTGTGXGAAAGAAA
NAFlex_TF_3v79_11_dna_wholeA - Dna B parmBSC1 TIP3P DNA-B Duplex Naked TIP3P Electroneutral 200 GTTACTGTGGXAAAGAAA
NAFlex_TF_3v79_11_dna_wholeB - Dna B parmBSC1 TIP3P DNA-B Duplex Naked TIP3P Electroneutral 200 GTTACTGTGGXAAAGAAA
NAFlex_TF_3v79_9_dna_wholeA - Dna B parmBSC1 TIP3P DNA-B Duplex Naked TIP3P Electroneutral 200 GTTACTGTXGGAAAGAAA
NAFlex_TF_3v79_9_dna_wholeB - Dna B parmBSC1 TIP3P DNA-B Duplex Naked TIP3P Electroneutral 200 GTTACTGTXGGAAAGAAA
NAFlex_TF_3v79_10_wholeA - Prot B parmBSC1 TIP3P -B Duplex Naked TIP3P Electroneutral 200 GTTACTGTGXGAAAGAAA
NAFlex_TF_3v79_10_wholeB - Prot B parmBSC1 TIP3P -B Duplex Naked TIP3P Electroneutral 200 GTTACTGTGXGAAAGAAA
NAFlex_TF_3v79_11_wholeA - Prot B parmBSC1 TIP3P -B Duplex Naked TIP3P Electroneutral 200 GTTACTGTGGXAAAGAAA
NAFlex_TF_3v79_11_wholeB - Prot B parmBSC1 TIP3P -B Duplex Naked TIP3P Electroneutral 200 GTTACTGTGGXAAAGAAA
NAFlex_TF_3v79_9_wholeA - Prot B parmBSC1 TIP3P -B Duplex Naked TIP3P Electroneutral 200 GTTACTGTXGGAAAGAAA
NAFlex_TF_3v79_9_wholeB - Prot B parmBSC1 TIP3P -B Duplex Naked TIP3P Electroneutral 200 GTTACTGTXGGAAAGAAA