Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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5' |
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112 |
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111 |
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110 |
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109 |
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108 |
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107 |
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Interactive Sequence (see Help)
| Mean | Stdev |
| 1_H41-112_O6-1 | 2.141 | 0.864 |
| Mean | Stdev |
| 1_N3-112_H1-1 | 2.062 | 0.644 |
| Mean | Stdev |
| 1_O2-112_H21-1 | 2.023 | 0.557 |
| Mean | Stdev |
| 10_H41-103_O6-10 | 1.982 | 0.186 |
| Mean | Stdev |
| 10_N3-103_H1-10 | 1.949 | 0.093 |
| Mean | Stdev |
| 10_O2-103_H21-10 | 1.897 | 0.121 |
| Mean | Stdev |
| 11_H3-102_N1-11 | 1.974 | 0.121 |
| Mean | Stdev |
| 11_O4-102_H61-11 | 2.021 | 0.212 |
| Mean | Stdev |
| 12_H61-101_O4-12 | 2.007 | 0.193 |
| Mean | Stdev |
| 12_N1-101_H3-12 | 1.959 | 0.115 |
| Mean | Stdev |
| 13_H61-100_O4-13 | 1.976 | 0.170 |
| Mean | Stdev |
| 13_N1-100_H3-13 | 1.974 | 0.121 |
| Mean | Stdev |
| 14_H41-99_O6-14 | 1.992 | 0.177 |
| Mean | Stdev |
| 14_N3-99_H1-14 | 1.960 | 0.098 |
| Mean | Stdev |
| 14_O2-99_H21-14 | 1.901 | 0.127 |
| Mean | Stdev |
| 15_H1-98_N3-15 | 1.946 | 0.090 |
| Mean | Stdev |
| 15_H21-98_O2-15 | 1.877 | 0.114 |
| Mean | Stdev |
| 15_O6-98_H41-15 | 1.966 | 0.167 |
| Mean | Stdev |
| 16_H1-97_N3-16 | 1.955 | 0.091 |
| Mean | Stdev |
| 16_H21-97_O2-16 | 1.927 | 0.137 |
| Mean | Stdev |
| 16_O6-97_H41-16 | 1.977 | 0.166 |
| Mean | Stdev |
| 17_H61-96_O4-17 | 1.960 | 0.173 |
| Mean | Stdev |
| 17_N1-96_H3-17 | 2.004 | 0.140 |
| Mean | Stdev |
| 18_H41-95_O6-18 | 2.002 | 0.172 |
| Mean | Stdev |
| 18_N3-95_H1-18 | 1.974 | 0.100 |
| Mean | Stdev |
| 18_O2-95_H21-18 | 1.901 | 0.124 |
| Mean | Stdev |
| 19_H61-94_O4-19 | 2.006 | 0.199 |
| Mean | Stdev |
| 19_N1-94_H3-19 | 1.955 | 0.110 |
| Mean | Stdev |
| 2_H1-111_N3-2 | 1.949 | 0.086 |
| Mean | Stdev |
| 2_H21-111_O2-2 | 1.897 | 0.122 |
| Mean | Stdev |
| 2_O6-111_H41-2 | 1.945 | 0.143 |
| Mean | Stdev |
| 20_H1-93_N3-20 | 1.948 | 0.089 |
| Mean | Stdev |
| 20_H21-93_O2-20 | 1.891 | 0.121 |
| Mean | Stdev |
| 20_O6-93_H41-20 | 2.003 | 0.186 |
| Mean | Stdev |
| 21_H1-92_N3-21 | 1.953 | 0.089 |
| Mean | Stdev |
| 21_H21-92_O2-21 | 1.910 | 0.125 |
| Mean | Stdev |
| 21_O6-92_H41-21 | 1.978 | 0.163 |
| Mean | Stdev |
| 22_H41-91_O6-22 | 1.973 | 0.163 |
| Mean | Stdev |
| 22_N3-91_H1-22 | 1.953 | 0.090 |
| Mean | Stdev |
| 22_O2-91_H21-22 | 1.892 | 0.121 |
| Mean | Stdev |
| 23_H61-90_O4-23 | 2.033 | 0.208 |
| Mean | Stdev |
| 23_N1-90_H3-23 | 1.969 | 0.115 |
| Mean | Stdev |
| 24_H3-89_N1-24 | 1.980 | 0.121 |
| Mean | Stdev |
| 24_O4-89_H61-24 | 2.031 | 0.209 |
| Mean | Stdev |
| 25_H61-88_O4-25 | 2.017 | 0.222 |
| Mean | Stdev |
| 25_N1-88_H3-25 | 1.974 | 0.131 |
| Mean | Stdev |
| 26_H1-87_N3-26 | 1.959 | 0.093 |
| Mean | Stdev |
| 26_H21-87_O2-26 | 1.920 | 0.130 |
| Mean | Stdev |
| 26_O6-87_H41-26 | 1.988 | 0.170 |
| Mean | Stdev |
| 27_H61-86_O4-27 | 1.967 | 0.178 |
| Mean | Stdev |
| 27_N1-86_H3-27 | 1.997 | 0.134 |
| Mean | Stdev |
| 28_H41-85_O6-28 | 2.002 | 0.168 |
| Mean | Stdev |
| 28_N3-85_H1-28 | 1.961 | 0.095 |
| Mean | Stdev |
| 28_O2-85_H21-28 | 1.884 | 0.120 |
| Mean | Stdev |
| 29_H1-84_N3-29 | 1.954 | 0.094 |
| Mean | Stdev |
| 29_H21-84_O2-29 | 1.902 | 0.130 |
| Mean | Stdev |
| 29_O6-84_H41-29 | 1.990 | 0.160 |
| Mean | Stdev |
| 3_H41-110_O6-3 | 1.955 | 0.145 |
| Mean | Stdev |
| 3_N3-110_H1-3 | 1.961 | 0.089 |
| Mean | Stdev |
| 3_O2-110_H21-3 | 1.901 | 0.122 |
| Mean | Stdev |
| 30_H3-83_N1-30 | 1.999 | 0.132 |
| Mean | Stdev |
| 30_O4-83_H61-30 | 1.964 | 0.175 |
| Mean | Stdev |
| 31_H41-82_O6-31 | 1.997 | 0.175 |
| Mean | Stdev |
| 31_N3-82_H1-31 | 1.957 | 0.093 |
| Mean | Stdev |
| 31_O2-82_H21-31 | 1.919 | 0.134 |
| Mean | Stdev |
| 32_H3-81_N1-32 | 1.960 | 0.119 |
| Mean | Stdev |
| 32_O4-81_H61-32 | 2.060 | 0.252 |
| Mean | Stdev |
| 33_H61-80_O4-33 | 2.030 | 0.203 |
| Mean | Stdev |
| 33_N1-80_H3-33 | 1.988 | 0.125 |
| Mean | Stdev |
| 34_H3-79_N1-34 | 1.971 | 0.117 |
| Mean | Stdev |
| 34_O4-79_H61-34 | 2.026 | 0.205 |
| Mean | Stdev |
| 35_H1-78_N3-35 | 1.955 | 0.091 |
| Mean | Stdev |
| 35_H21-78_O2-35 | 1.892 | 0.121 |
| Mean | Stdev |
| 35_O6-78_H41-35 | 1.980 | 0.164 |
| Mean | Stdev |
| 36_H41-77_O6-36 | 1.974 | 0.163 |
| Mean | Stdev |
| 36_N3-77_H1-36 | 1.951 | 0.089 |
| Mean | Stdev |
| 36_O2-77_H21-36 | 1.907 | 0.128 |
| Mean | Stdev |
| 37_H41-76_O6-37 | 1.989 | 0.175 |
| Mean | Stdev |
| 37_N3-76_H1-37 | 1.947 | 0.089 |
| Mean | Stdev |
| 37_O2-76_H21-37 | 1.891 | 0.120 |
| Mean | Stdev |
| 38_H3-75_N1-38 | 1.957 | 0.112 |
| Mean | Stdev |
| 38_O4-75_H61-38 | 2.003 | 0.190 |
| Mean | Stdev |
| 39_H1-74_N3-39 | 1.969 | 0.097 |
| Mean | Stdev |
| 39_H21-74_O2-39 | 1.904 | 0.126 |
| Mean | Stdev |
| 39_O6-74_H41-39 | 1.999 | 0.170 |
| Mean | Stdev |
| 4_H1-109_N3-4 | 1.943 | 0.086 |
| Mean | Stdev |
| 4_H21-109_O2-4 | 1.887 | 0.118 |
| Mean | Stdev |
| 4_O6-109_H41-4 | 1.973 | 0.150 |
| Mean | Stdev |
| 40_H3-73_N1-40 | 1.988 | 0.122 |
| Mean | Stdev |
| 40_O4-73_H61-40 | 1.964 | 0.172 |
| Mean | Stdev |
| 41_H41-72_O6-41 | 1.973 | 0.158 |
| Mean | Stdev |
| 41_N3-72_H1-41 | 1.960 | 0.091 |
| Mean | Stdev |
| 41_O2-72_H21-41 | 1.924 | 0.133 |
| Mean | Stdev |
| 42_H41-71_O6-42 | 1.965 | 0.167 |
| Mean | Stdev |
| 42_N3-71_H1-42 | 1.950 | 0.091 |
| Mean | Stdev |
| 42_O2-71_H21-42 | 1.896 | 0.127 |
| Mean | Stdev |
| 43_H1-70_N3-43 | 1.963 | 0.096 |
| Mean | Stdev |
| 43_H21-70_O2-43 | 1.893 | 0.124 |
| Mean | Stdev |
| 43_O6-70_H41-43 | 1.989 | 0.165 |
| Mean | Stdev |
| 44_H3-69_N1-44 | 1.984 | 0.126 |
| Mean | Stdev |
| 44_O4-69_H61-44 | 1.978 | 0.176 |
| Mean | Stdev |
| 45_H3-68_N1-45 | 1.958 | 0.122 |
| Mean | Stdev |
| 45_O4-68_H61-45 | 2.012 | 0.206 |
| Mean | Stdev |
| 46_H61-67_O4-46 | 2.021 | 0.216 |
| Mean | Stdev |
| 46_N1-67_H3-46 | 1.971 | 0.122 |
| Mean | Stdev |
| 47_H1-66_N3-47 | 1.947 | 0.090 |
| Mean | Stdev |
| 47_H21-66_O2-47 | 1.894 | 0.121 |
| Mean | Stdev |
| 47_O6-66_H41-47 | 1.988 | 0.169 |
| Mean | Stdev |
| 48_H1-65_N3-48 | 1.953 | 0.088 |
| Mean | Stdev |
| 48_H21-65_O2-48 | 1.911 | 0.126 |
| Mean | Stdev |
| 48_O6-65_H41-48 | 1.965 | 0.158 |
| Mean | Stdev |
| 49_H41-64_O6-49 | 1.992 | 0.171 |
| Mean | Stdev |
| 49_N3-64_H1-49 | 1.964 | 0.097 |
| Mean | Stdev |
| 49_O2-64_H21-49 | 1.893 | 0.126 |
| Mean | Stdev |
| 5_H61-108_O4-5 | 1.977 | 0.167 |
| Mean | Stdev |
| 5_N1-108_H3-5 | 1.998 | 0.123 |
| Mean | Stdev |
| 50_H61-63_O4-50 | 2.003 | 0.187 |
| Mean | Stdev |
| 50_N1-63_H3-50 | 1.953 | 0.111 |
| Mean | Stdev |
| 51_H61-62_O4-51 | 1.995 | 0.176 |
| Mean | Stdev |
| 51_N1-62_H3-51 | 1.985 | 0.124 |
| Mean | Stdev |
| 52_H3-61_N1-52 | 1.995 | 0.125 |
| Mean | Stdev |
| 52_O4-61_H61-52 | 1.990 | 0.174 |
| Mean | Stdev |
| 53_H41-60_O6-53 | 1.978 | 0.164 |
| Mean | Stdev |
| 53_N3-60_H1-53 | 1.944 | 0.090 |
| Mean | Stdev |
| 53_O2-60_H21-53 | 1.893 | 0.124 |
| Mean | Stdev |
| 54_H1-59_N3-54 | 1.960 | 0.090 |
| Mean | Stdev |
| 54_H21-59_O2-54 | 1.907 | 0.123 |
| Mean | Stdev |
| 54_O6-59_H41-54 | 1.953 | 0.145 |
| Mean | Stdev |
| 55_H41-58_O6-55 | 1.950 | 0.148 |
| Mean | Stdev |
| 55_N3-58_H1-55 | 1.954 | 0.090 |
| Mean | Stdev |
| 55_O2-58_H21-55 | 1.903 | 0.127 |
| Mean | Stdev |
| 56_H1-57_N3-56 | 2.179 | 1.156 |
| Mean | Stdev |
| 56_H21-57_O2-56 | 2.157 | 1.167 |
| Mean | Stdev |
| 56_O6-57_H41-56 | 2.245 | 1.199 |
| Mean | Stdev |
| 6_H3-107_N1-6 | 1.982 | 0.119 |
| Mean | Stdev |
| 6_O4-107_H61-6 | 1.984 | 0.172 |
| Mean | Stdev |
| 7_H3-106_N1-7 | 1.957 | 0.111 |
| Mean | Stdev |
| 7_O4-106_H61-7 | 1.992 | 0.180 |
| Mean | Stdev |
| 8_H1-105_N3-8 | 1.964 | 0.094 |
| Mean | Stdev |
| 8_H21-105_O2-8 | 1.890 | 0.116 |
| Mean | Stdev |
| 8_O6-105_H41-8 | 1.993 | 0.170 |
| Mean | Stdev |
| 9_H41-104_O6-9 | 1.964 | 0.157 |
| Mean | Stdev |
| 9_N3-104_H1-9 | 1.951 | 0.089 |
| Mean | Stdev |
| 9_O2-104_H21-9 | 1.905 | 0.128 |
| Nucleotide Number | Hydrogen Bond | Mean | Stdev |
| 1 | H41-O6_1-112 | 2.1413 | 0.8644 |
| 1 | N3-H1_1-112 | 2.0621 | 0.6436 |
| 1 | O2-H21_1-112 | 2.0235 | 0.5572 |
| 2 | O6-H41_2-111 | 1.9448 | 0.1435 |
| 2 | H1-N3_2-111 | 1.9492 | 0.0862 |
| 2 | H21-O2_2-111 | 1.8967 | 0.1222 |
| 3 | H41-O6_3-110 | 1.9547 | 0.1453 |
| 3 | N3-H1_3-110 | 1.9606 | 0.0895 |
| 3 | O2-H21_3-110 | 1.9015 | 0.1218 |
| 4 | O6-H41_4-109 | 1.9728 | 0.1505 |
| 4 | H1-N3_4-109 | 1.9431 | 0.0855 |
| 4 | H21-O2_4-109 | 1.8867 | 0.1181 |
| 5 | N1-H3_5-108 | 1.9975 | 0.1234 |
| 5 | H61-O4_5-108 | 1.9767 | 0.1672 |
| 6 | H3-N1_6-107 | 1.9822 | 0.1186 |
| 6 | O4-H61_6-107 | 1.9841 | 0.1717 |
| 7 | H3-N1_7-106 | 1.9572 | 0.1106 |
| 7 | O4-H61_7-106 | 1.9921 | 0.1800 |
| 8 | O6-H41_8-105 | 1.9930 | 0.1704 |
| 8 | H1-N3_8-105 | 1.9642 | 0.0936 |
| 8 | H21-O2_8-105 | 1.8900 | 0.1156 |
| 9 | H41-O6_9-104 | 1.9637 | 0.1571 |
| 9 | N3-H1_9-104 | 1.9513 | 0.0891 |
| 9 | O2-H21_9-104 | 1.9050 | 0.1276 |
| 10 | H41-O6_10-103 | 1.9821 | 0.1865 |
| 10 | N3-H1_10-103 | 1.9489 | 0.0933 |
| 10 | O2-H21_10-103 | 1.8969 | 0.1212 |
| 11 | H3-N1_11-102 | 1.9741 | 0.1211 |
| 11 | O4-H61_11-102 | 2.0211 | 0.2116 |
| 12 | N1-H3_12-101 | 1.9587 | 0.1145 |
| 12 | H61-O4_12-101 | 2.0071 | 0.1926 |
| 13 | N1-H3_13-100 | 1.9744 | 0.1212 |
| 13 | H61-O4_13-100 | 1.9765 | 0.1704 |
| 14 | H41-O6_14-99 | 1.9917 | 0.1770 |
| 14 | N3-H1_14-99 | 1.9605 | 0.0975 |
| 14 | O2-H21_14-99 | 1.9006 | 0.1265 |
| 15 | O6-H41_15-98 | 1.9660 | 0.1666 |
| 15 | H1-N3_15-98 | 1.9462 | 0.0898 |
| 15 | H21-O2_15-98 | 1.8775 | 0.1142 |
| 16 | O6-H41_16-97 | 1.9767 | 0.1657 |
| 16 | H1-N3_16-97 | 1.9552 | 0.0909 |
| 16 | H21-O2_16-97 | 1.9269 | 0.1370 |
| 17 | N1-H3_17-96 | 2.0044 | 0.1396 |
| 17 | H61-O4_17-96 | 1.9603 | 0.1733 |
| 18 | H41-O6_18-95 | 2.0022 | 0.1724 |
| 18 | N3-H1_18-95 | 1.9745 | 0.0996 |
| 18 | O2-H21_18-95 | 1.9015 | 0.1237 |
| 19 | N1-H3_19-94 | 1.9547 | 0.1098 |
| 19 | H61-O4_19-94 | 2.0060 | 0.1991 |
| 20 | O6-H41_20-93 | 2.0028 | 0.1863 |
| 20 | H1-N3_20-93 | 1.9483 | 0.0892 |
| 20 | H21-O2_20-93 | 1.8915 | 0.1213 |
| 21 | O6-H41_21-92 | 1.9779 | 0.1625 |
| 21 | H1-N3_21-92 | 1.9531 | 0.0893 |
| 21 | H21-O2_21-92 | 1.9102 | 0.1248 |
| 22 | H41-O6_22-91 | 1.9729 | 0.1626 |
| 22 | N3-H1_22-91 | 1.9532 | 0.0903 |
| 22 | O2-H21_22-91 | 1.8917 | 0.1208 |
| 23 | N1-H3_23-90 | 1.9693 | 0.1150 |
| 23 | H61-O4_23-90 | 2.0332 | 0.2078 |
| 24 | H3-N1_24-89 | 1.9795 | 0.1208 |
| 24 | O4-H61_24-89 | 2.0311 | 0.2086 |
| 25 | N1-H3_25-88 | 1.9743 | 0.1309 |
| 25 | H61-O4_25-88 | 2.0171 | 0.2215 |
| 26 | O6-H41_26-87 | 1.9885 | 0.1695 |
| 26 | H1-N3_26-87 | 1.9590 | 0.0926 |
| 26 | H21-O2_26-87 | 1.9197 | 0.1304 |
| 27 | N1-H3_27-86 | 1.9966 | 0.1343 |
| 27 | H61-O4_27-86 | 1.9671 | 0.1779 |
| 28 | H41-O6_28-85 | 2.0025 | 0.1683 |
| 28 | N3-H1_28-85 | 1.9609 | 0.0947 |
| 28 | O2-H21_28-85 | 1.8842 | 0.1197 |
| 29 | O6-H41_29-84 | 1.9896 | 0.1604 |
| 29 | H1-N3_29-84 | 1.9539 | 0.0943 |
| 29 | H21-O2_29-84 | 1.9018 | 0.1295 |
| 30 | H3-N1_30-83 | 1.9990 | 0.1317 |
| 30 | O4-H61_30-83 | 1.9635 | 0.1753 |
| 31 | H41-O6_31-82 | 1.9972 | 0.1753 |
| 31 | N3-H1_31-82 | 1.9571 | 0.0934 |
| 31 | O2-H21_31-82 | 1.9188 | 0.1343 |
| 32 | H3-N1_32-81 | 1.9602 | 0.1194 |
| 32 | O4-H61_32-81 | 2.0602 | 0.2517 |
| 33 | N1-H3_33-80 | 1.9878 | 0.1246 |
| 33 | H61-O4_33-80 | 2.0295 | 0.2033 |
| 34 | H3-N1_34-79 | 1.9713 | 0.1169 |
| 34 | O4-H61_34-79 | 2.0261 | 0.2050 |
| 35 | O6-H41_35-78 | 1.9797 | 0.1636 |
| 35 | H1-N3_35-78 | 1.9553 | 0.0908 |
| 35 | H21-O2_35-78 | 1.8921 | 0.1209 |
| 36 | H41-O6_36-77 | 1.9735 | 0.1629 |
| 36 | N3-H1_36-77 | 1.9511 | 0.0890 |
| 36 | O2-H21_36-77 | 1.9072 | 0.1275 |
| 37 | H41-O6_37-76 | 1.9893 | 0.1755 |
| 37 | N3-H1_37-76 | 1.9470 | 0.0895 |
| 37 | O2-H21_37-76 | 1.8905 | 0.1198 |
| 38 | H3-N1_38-75 | 1.9574 | 0.1123 |
| 38 | O4-H61_38-75 | 2.0031 | 0.1897 |
| 39 | O6-H41_39-74 | 1.9987 | 0.1698 |
| 39 | H1-N3_39-74 | 1.9688 | 0.0974 |
| 39 | H21-O2_39-74 | 1.9041 | 0.1258 |
| 40 | H3-N1_40-73 | 1.9878 | 0.1219 |
| 40 | O4-H61_40-73 | 1.9637 | 0.1719 |
| 41 | H41-O6_41-72 | 1.9732 | 0.1576 |
| 41 | N3-H1_41-72 | 1.9595 | 0.0913 |
| 41 | O2-H21_41-72 | 1.9242 | 0.1327 |
| 42 | H41-O6_42-71 | 1.9647 | 0.1671 |
| 42 | N3-H1_42-71 | 1.9496 | 0.0908 |
| 42 | O2-H21_42-71 | 1.8964 | 0.1268 |
| 43 | O6-H41_43-70 | 1.9886 | 0.1648 |
| 43 | H1-N3_43-70 | 1.9627 | 0.0955 |
| 43 | H21-O2_43-70 | 1.8928 | 0.1236 |
| 44 | H3-N1_44-69 | 1.9845 | 0.1264 |
| 44 | O4-H61_44-69 | 1.9776 | 0.1757 |
| 45 | H3-N1_45-68 | 1.9583 | 0.1219 |
| 45 | O4-H61_45-68 | 2.0119 | 0.2056 |
| 46 | N1-H3_46-67 | 1.9709 | 0.1219 |
| 46 | H61-O4_46-67 | 2.0205 | 0.2164 |
| 47 | O6-H41_47-66 | 1.9881 | 0.1691 |
| 47 | H1-N3_47-66 | 1.9470 | 0.0904 |
| 47 | H21-O2_47-66 | 1.8941 | 0.1212 |
| 48 | O6-H41_48-65 | 1.9651 | 0.1580 |
| 48 | H1-N3_48-65 | 1.9534 | 0.0885 |
| 48 | H21-O2_48-65 | 1.9108 | 0.1259 |
| 49 | H41-O6_49-64 | 1.9921 | 0.1711 |
| 49 | N3-H1_49-64 | 1.9636 | 0.0973 |
| 49 | O2-H21_49-64 | 1.8929 | 0.1257 |
| 50 | N1-H3_50-63 | 1.9527 | 0.1107 |
| 50 | H61-O4_50-63 | 2.0031 | 0.1871 |
| 51 | N1-H3_51-62 | 1.9850 | 0.1238 |
| 51 | H61-O4_51-62 | 1.9947 | 0.1760 |
| 52 | H3-N1_52-61 | 1.9952 | 0.1254 |
| 52 | O4-H61_52-61 | 1.9897 | 0.1738 |
| 53 | H41-O6_53-60 | 1.9782 | 0.1643 |
| 53 | N3-H1_53-60 | 1.9445 | 0.0901 |
| 53 | O2-H21_53-60 | 1.8930 | 0.1244 |
| 54 | O6-H41_54-59 | 1.9530 | 0.1453 |
| 54 | H1-N3_54-59 | 1.9605 | 0.0896 |
| 54 | H21-O2_54-59 | 1.9075 | 0.1227 |
| 55 | H41-O6_55-58 | 1.9504 | 0.1479 |
| 55 | N3-H1_55-58 | 1.9537 | 0.0900 |
| 55 | O2-H21_55-58 | 1.9034 | 0.1271 |
| 56 | O6-H41_56-57 | 2.2446 | 1.1988 |
| 56 | H1-N3_56-57 | 2.1789 | 1.1564 |
| 56 | H21-O2_56-57 | 2.1571 | 1.1666 |
