NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.348	0.000	0.000	-0.055	0.000	0.000
Slide	0.000	3.097	1.462	0.000	-0.074	-0.219
Rise	0.000	1.462	7.059	0.000	-0.046	-0.170
Tilt	-0.055	0.000	0.000	0.028	0.000	0.000
Roll	0.000	-0.074	-0.046	0.000	0.025	0.009
Twist	0.000	-0.219	-0.170	0.000	0.009	0.043

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.048	0.000	0.000	0.002	0.000	0.000
Slide	0.000	5.069	2.964	0.000	-0.046	-0.222
Rise	0.000	2.964	10.038	0.000	0.043	-0.176
Tilt	0.002	0.000	0.000	0.047	0.000	0.000
Roll	0.000	-0.046	0.043	0.000	0.032	0.009
Twist	0.000	-0.222	-0.176	0.000	0.009	0.072

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.936	0.000	0.000	-0.126	0.000	0.000
Slide	0.000	2.998	0.539	0.000	0.002	-0.135
Rise	0.000	0.539	8.222	0.000	-0.076	-0.239
Tilt	-0.126	0.000	0.000	0.030	0.000	0.000
Roll	0.000	0.002	-0.076	0.000	0.016	0.007
Twist	0.000	-0.135	-0.239	0.000	0.007	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.906	0.000	0.000	-0.116	0.000	0.000
Slide	0.000	2.852	0.235	0.000	0.009	-0.116
Rise	0.000	0.235	8.358	0.000	-0.095	-0.224
Tilt	-0.116	0.000	0.000	0.030	0.000	0.000
Roll	0.000	0.009	-0.095	0.000	0.017	0.007
Twist	0.000	-0.116	-0.224	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.804	0.000	0.000	-0.079	0.000	0.000
Slide	0.000	1.907	1.450	0.000	-0.031	-0.112
Rise	0.000	1.450	7.535	0.000	-0.052	-0.184
Tilt	-0.079	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.031	-0.052	0.000	0.023	0.012
Twist	0.000	-0.112	-0.184	0.000	0.012	0.031

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.187	0.000	0.000	-0.118	0.000	0.000
Slide	0.000	2.760	2.258	0.000	0.067	-0.072
Rise	0.000	2.258	10.606	0.000	0.135	-0.218
Tilt	-0.118	0.000	0.000	0.041	0.000	0.000
Roll	0.000	0.067	0.135	0.000	0.025	0.007
Twist	0.000	-0.072	-0.218	0.000	0.007	0.037

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.285	0.000	0.000	-0.136	0.000	0.000
Slide	0.000	3.069	2.529	0.000	0.065	-0.108
Rise	0.000	2.529	11.710	0.000	0.134	-0.248
Tilt	-0.136	0.000	0.000	0.043	0.000	0.000
Roll	0.000	0.065	0.134	0.000	0.027	0.008
Twist	0.000	-0.108	-0.248	0.000	0.008	0.040

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.794	0.000	0.000	-0.083	0.000	0.000
Slide	0.000	1.934	1.632	0.000	-0.029	-0.126
Rise	0.000	1.632	7.731	0.000	-0.058	-0.197
Tilt	-0.083	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.029	-0.058	0.000	0.024	0.011
Twist	0.000	-0.126	-0.197	0.000	0.011	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.292	0.000	0.000	-0.063	0.000	0.000
Slide	0.000	3.094	1.456	0.000	-0.062	-0.221
Rise	0.000	1.456	7.352	0.000	-0.046	-0.167
Tilt	-0.063	0.000	0.000	0.029	0.000	0.000
Roll	0.000	-0.062	-0.046	0.000	0.025	0.008
Twist	0.000	-0.221	-0.167	0.000	0.008	0.045

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.428	0.281

	Mean	Stdev
roll-10-GCGC	-1.953	5.440

	Mean	Stdev
shift-10-GCGC	0.000	0.831

	Mean	Stdev
slide-10-GCGC	-0.347	0.521

	Mean	Stdev
tilt-10-GCGC	0.000	4.464

	Mean	Stdev
twist-10-GCGC	34.693	4.579

	Mean	Stdev
rise-2-GCGC	3.407	0.267

	Mean	Stdev
roll-2-GCGC	-1.820	5.265

	Mean	Stdev
shift-2-GCGC	0.000	0.828

	Mean	Stdev
slide-2-GCGC	-0.289	0.504

	Mean	Stdev
tilt-2-GCGC	0.000	4.530

	Mean	Stdev
twist-2-GCGC	34.494	4.555

	Mean	Stdev
rise-3-CGCG	3.135	0.320

	Mean	Stdev
roll-3-CGCG	5.474	6.590

	Mean	Stdev
shift-3-CGCG	0.000	1.185

	Mean	Stdev
slide-3-CGCG	0.152	0.531

	Mean	Stdev
tilt-3-CGCG	0.000	6.572

	Mean	Stdev
twist-3-CGCG	32.784	7.063

	Mean	Stdev
rise-4-GATC	3.383	0.312

	Mean	Stdev
roll-4-GATC	3.178	5.547

	Mean	Stdev
shift-4-GATC	0.000	0.984

	Mean	Stdev
slide-4-GATC	-0.053	0.648

	Mean	Stdev
tilt-4-GATC	0.000	4.963

	Mean	Stdev
twist-4-GATC	34.919	5.577

	Mean	Stdev
rise-5-AATT	3.378	0.307

	Mean	Stdev
roll-5-AATT	1.548	5.146

	Mean	Stdev
shift-5-AATT	0.000	0.688

	Mean	Stdev
slide-5-AATT	-0.545	0.557

	Mean	Stdev
tilt-5-AATT	0.000	4.774

	Mean	Stdev
twist-5-AATT	35.716	4.764

	Mean	Stdev
rise-6-ATAT	3.386	0.269

	Mean	Stdev
roll-6-ATAT	-1.508	4.381

	Mean	Stdev
shift-6-ATAT	0.000	0.535

	Mean	Stdev
slide-6-ATAT	-1.011	0.396

	Mean	Stdev
tilt-6-ATAT	0.000	3.547

	Mean	Stdev
twist-6-ATAT	32.737	3.118

	Mean	Stdev
rise-7-TTAA	3.375	0.300

	Mean	Stdev
roll-7-TTAA	1.507	4.975

	Mean	Stdev
shift-7-TTAA	0.000	0.712

	Mean	Stdev
slide-7-TTAA	-0.557	0.551

	Mean	Stdev
tilt-7-TTAA	0.000	4.742

	Mean	Stdev
twist-7-TTAA	35.729	4.562

	Mean	Stdev
rise-8-TCGA	3.392	0.313

	Mean	Stdev
roll-8-TCGA	2.917	5.476

	Mean	Stdev
shift-8-TCGA	0.000	1.003

	Mean	Stdev
slide-8-TCGA	-0.090	0.673

	Mean	Stdev
tilt-8-TCGA	0.000	4.931

	Mean	Stdev
twist-8-TCGA	34.858	5.789

	Mean	Stdev
rise-9-CGCG	3.132	0.315

	Mean	Stdev
roll-9-CGCG	6.476	6.460

	Mean	Stdev
shift-9-CGCG	0.000	1.122

	Mean	Stdev
slide-9-CGCG	0.144	0.535

	Mean	Stdev
tilt-9-CGCG	0.000	6.132

	Mean	Stdev
twist-9-CGCG	32.474	7.061

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