NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.367	0.000	0.000	-0.069	0.000	0.000
Slide	0.000	3.168	1.536	0.000	-0.068	-0.227
Rise	0.000	1.536	7.732	0.000	-0.059	-0.180
Tilt	-0.069	0.000	0.000	0.029	0.000	0.000
Roll	0.000	-0.068	-0.059	0.000	0.025	0.007
Twist	0.000	-0.227	-0.180	0.000	0.007	0.045

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.223	0.000	0.000	-0.011	0.000	0.000
Slide	0.000	4.709	2.663	0.000	-0.026	-0.184
Rise	0.000	2.663	9.777	0.000	0.053	-0.102
Tilt	-0.011	0.000	0.000	0.043	0.000	0.000
Roll	0.000	-0.026	0.053	0.000	0.033	0.006
Twist	0.000	-0.184	-0.102	0.000	0.006	0.067

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.842	0.000	0.000	-0.104	0.000	0.000
Slide	0.000	2.951	0.445	0.000	0.004	-0.139
Rise	0.000	0.445	8.006	0.000	-0.058	-0.224
Tilt	-0.104	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.004	-0.058	0.000	0.016	0.006
Twist	0.000	-0.139	-0.224	0.000	0.006	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.909	0.000	0.000	-0.125	0.000	0.000
Slide	0.000	3.061	0.308	0.000	0.014	-0.128
Rise	0.000	0.308	8.190	0.000	-0.083	-0.226
Tilt	-0.125	0.000	0.000	0.032	0.000	0.000
Roll	0.000	0.014	-0.083	0.000	0.017	0.006
Twist	0.000	-0.128	-0.226	0.000	0.006	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.848	0.000	0.000	-0.073	0.000	0.000
Slide	0.000	1.921	1.544	0.000	-0.040	-0.111
Rise	0.000	1.544	7.809	0.000	-0.062	-0.187
Tilt	-0.073	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.040	-0.062	0.000	0.022	0.011
Twist	0.000	-0.111	-0.187	0.000	0.011	0.028

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.199	0.000	0.000	-0.129	0.000	0.000
Slide	0.000	3.184	2.730	0.000	0.071	-0.088
Rise	0.000	2.730	11.028	0.000	0.138	-0.245
Tilt	-0.129	0.000	0.000	0.043	0.000	0.000
Roll	0.000	0.071	0.138	0.000	0.026	0.006
Twist	0.000	-0.088	-0.245	0.000	0.006	0.037

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.241	0.000	0.000	-0.134	0.000	0.000
Slide	0.000	2.734	2.201	0.000	0.068	-0.082
Rise	0.000	2.201	10.913	0.000	0.132	-0.242
Tilt	-0.134	0.000	0.000	0.043	0.000	0.000
Roll	0.000	0.068	0.132	0.000	0.025	0.007
Twist	0.000	-0.082	-0.242	0.000	0.007	0.037

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.851	0.000	0.000	-0.083	0.000	0.000
Slide	0.000	1.965	1.267	0.000	-0.036	-0.117
Rise	0.000	1.267	7.746	0.000	-0.058	-0.162
Tilt	-0.083	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.036	-0.058	0.000	0.023	0.012
Twist	0.000	-0.117	-0.162	0.000	0.012	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.325	0.000	0.000	-0.077	0.000	0.000
Slide	0.000	3.249	1.456	0.000	-0.062	-0.226
Rise	0.000	1.456	7.376	0.000	-0.035	-0.144
Tilt	-0.077	0.000	0.000	0.029	0.000	0.000
Roll	0.000	-0.062	-0.035	0.000	0.023	0.004
Twist	0.000	-0.226	-0.144	0.000	0.004	0.038

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.365	0.284

	Mean	Stdev
roll-10-GCGC	-1.325	5.226

	Mean	Stdev
shift-10-GCGC	0.000	0.851

	Mean	Stdev
slide-10-GCGC	-0.277	0.494

	Mean	Stdev
tilt-10-GCGC	0.000	4.496

	Mean	Stdev
twist-10-GCGC	33.703	4.619

	Mean	Stdev
rise-2-GCGC	3.409	0.278

	Mean	Stdev
roll-2-GCGC	-1.910	5.481

	Mean	Stdev
shift-2-GCGC	0.000	0.847

	Mean	Stdev
slide-2-GCGC	-0.251	0.525

	Mean	Stdev
tilt-2-GCGC	0.000	4.574

	Mean	Stdev
twist-2-GCGC	34.420	4.661

	Mean	Stdev
rise-3-CGCG	3.102	0.324

	Mean	Stdev
roll-3-CGCG	5.980	6.555

	Mean	Stdev
shift-3-CGCG	0.000	1.138

	Mean	Stdev
slide-3-CGCG	0.159	0.553

	Mean	Stdev
tilt-3-CGCG	0.000	6.266

	Mean	Stdev
twist-3-CGCG	32.337	7.384

	Mean	Stdev
rise-4-GATC	3.396	0.309

	Mean	Stdev
roll-4-GATC	2.820	5.750

	Mean	Stdev
shift-4-GATC	0.000	0.932

	Mean	Stdev
slide-4-GATC	-0.086	0.652

	Mean	Stdev
tilt-4-GATC	0.000	4.875

	Mean	Stdev
twist-4-GATC	35.128	5.907

	Mean	Stdev
rise-5-AATT	3.378	0.294

	Mean	Stdev
roll-5-AATT	1.533	4.966

	Mean	Stdev
shift-5-AATT	0.000	0.699

	Mean	Stdev
slide-5-AATT	-0.521	0.551

	Mean	Stdev
tilt-5-AATT	0.000	4.806

	Mean	Stdev
twist-5-AATT	35.968	4.590

	Mean	Stdev
rise-6-ATAT	3.380	0.269

	Mean	Stdev
roll-6-ATAT	-1.717	4.313

	Mean	Stdev
shift-6-ATAT	0.000	0.514

	Mean	Stdev
slide-6-ATAT	-1.021	0.404

	Mean	Stdev
tilt-6-ATAT	0.000	3.674

	Mean	Stdev
twist-6-ATAT	33.060	3.137

	Mean	Stdev
rise-7-TTAA	3.387	0.297

	Mean	Stdev
roll-7-TTAA	1.213	5.159

	Mean	Stdev
shift-7-TTAA	0.000	0.724

	Mean	Stdev
slide-7-TTAA	-0.502	0.569

	Mean	Stdev
tilt-7-TTAA	0.000	4.902

	Mean	Stdev
twist-7-TTAA	35.967	5.120

	Mean	Stdev
rise-8-TCGA	3.376	0.298

	Mean	Stdev
roll-8-TCGA	3.282	5.620

	Mean	Stdev
shift-8-TCGA	0.000	0.957

	Mean	Stdev
slide-8-TCGA	-0.092	0.639

	Mean	Stdev
tilt-8-TCGA	0.000	4.896

	Mean	Stdev
twist-8-TCGA	34.402	5.787

	Mean	Stdev
rise-9-CGCG	3.149	0.320

	Mean	Stdev
roll-9-CGCG	5.718	6.383

	Mean	Stdev
shift-9-CGCG	0.000	1.186

	Mean	Stdev
slide-9-CGCG	0.187	0.526

	Mean	Stdev
tilt-9-CGCG	0.000	6.370

	Mean	Stdev
twist-9-CGCG	33.514	7.051

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