NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.865	0.000	0.000	-0.030	0.000	0.000
Slide	0.000	4.278	3.342	0.000	-0.016	-0.144
Rise	0.000	3.342	11.733	0.000	0.122	-0.150
Tilt	-0.030	0.000	0.000	0.049	0.000	0.000
Roll	0.000	-0.016	0.122	0.000	0.034	0.010
Twist	0.000	-0.144	-0.150	0.000	0.010	0.057

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.064	0.000	0.000	-0.142	0.000	0.000
Slide	0.000	2.970	0.613	0.000	0.001	-0.157
Rise	0.000	0.613	8.506	0.000	-0.091	-0.253
Tilt	-0.142	0.000	0.000	0.030	0.000	0.000
Roll	0.000	0.001	-0.091	0.000	0.017	0.007
Twist	0.000	-0.157	-0.253	0.000	0.007	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.083	0.000	0.000	-0.105	0.000	0.000
Slide	0.000	2.908	0.167	0.000	0.018	-0.154
Rise	0.000	0.167	8.543	0.000	-0.105	-0.238
Tilt	-0.105	0.000	0.000	0.024	0.000	0.000
Roll	0.000	0.018	-0.105	0.000	0.019	0.008
Twist	0.000	-0.154	-0.238	0.000	0.008	0.028

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.854	0.000	0.000	-0.125	0.000	0.000
Slide	0.000	2.513	1.356	0.000	-0.040	-0.116
Rise	0.000	1.356	8.976	0.000	-0.031	-0.149
Tilt	-0.125	0.000	0.000	0.035	0.000	0.000
Roll	0.000	-0.040	-0.031	0.000	0.026	0.011
Twist	0.000	-0.116	-0.149	0.000	0.011	0.043

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.852	0.000	0.000	-0.122	0.000	0.000
Slide	0.000	3.867	2.567	0.000	0.091	-0.115
Rise	0.000	2.567	11.805	0.000	0.158	-0.230
Tilt	-0.122	0.000	0.000	0.043	0.000	0.000
Roll	0.000	0.091	0.158	0.000	0.022	0.001
Twist	0.000	-0.115	-0.230	0.000	0.001	0.031

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.170	0.000	0.000	-0.124	0.000	0.000
Slide	0.000	2.722	2.022	0.000	0.065	-0.067
Rise	0.000	2.022	10.651	0.000	0.136	-0.186
Tilt	-0.124	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.065	0.136	0.000	0.026	0.007
Twist	0.000	-0.067	-0.186	0.000	0.007	0.037

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.867	0.000	0.000	-0.036	0.000	0.000
Slide	0.000	4.775	3.386	0.000	-0.039	-0.164
Rise	0.000	3.386	11.723	0.000	0.115	-0.171
Tilt	-0.036	0.000	0.000	0.052	0.000	0.000
Roll	0.000	-0.039	0.115	0.000	0.035	0.012
Twist	0.000	-0.164	-0.171	0.000	0.012	0.060

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.027	0.000	0.000	-0.144	0.000	0.000
Slide	0.000	2.566	1.176	0.000	-0.032	-0.089
Rise	0.000	1.176	8.904	0.000	-0.028	-0.165
Tilt	-0.144	0.000	0.000	0.038	0.000	0.000
Roll	0.000	-0.032	-0.028	0.000	0.023	0.010
Twist	0.000	-0.089	-0.165	0.000	0.010	0.045

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.923	0.000	0.000	-0.090	0.000	0.000
Slide	0.000	2.686	1.184	0.000	-0.020	-0.091
Rise	0.000	1.184	7.212	0.000	-0.131	-0.207
Tilt	-0.090	0.000	0.000	0.036	0.000	0.000
Roll	0.000	-0.020	-0.131	0.000	0.021	0.012
Twist	0.000	-0.091	-0.207	0.000	0.012	0.035

[Image courtesy of Curves+]

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	Mean	Stdev
-axgt.5.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-gtax.7.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-xgxg.6.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.418	0.262

	Mean	Stdev
roll-10-GCGC	-4.236	5.737

	Mean	Stdev
shift-10-GCGC	0.000	1.073

	Mean	Stdev
slide-10-GCGC	-0.217	0.447

	Mean	Stdev
tilt-10-GCGC	0.000	4.777

	Mean	Stdev
twist-10-GCGC	33.290	4.938

	Mean	Stdev
rise-2-GCGC	3.412	0.271

	Mean	Stdev
roll-2-GCGC	-1.727	5.317

	Mean	Stdev
shift-2-GCGC	0.000	0.852

	Mean	Stdev
slide-2-GCGC	-0.297	0.516

	Mean	Stdev
tilt-2-GCGC	0.000	4.495

	Mean	Stdev
twist-2-GCGC	34.313	4.479

	Mean	Stdev
rise-3-CGCG	3.190	0.313

	Mean	Stdev
roll-3-CGCG	5.605	6.484

	Mean	Stdev
shift-3-CGCG	0.000	1.239

	Mean	Stdev
slide-3-CGCG	0.326	0.551

	Mean	Stdev
tilt-3-CGCG	0.000	7.428

	Mean	Stdev
twist-3-CGCG	34.313	6.675

	Mean	Stdev
rise-4-GATC	3.306	0.270

	Mean	Stdev
roll-4-GATC	1.896	5.055

	Mean	Stdev
shift-4-GATC	0.000	1.205

	Mean	Stdev
slide-4-GATC	0.330	0.530

	Mean	Stdev
tilt-4-GATC	0.000	5.996

	Mean	Stdev
twist-4-GATC	37.544	4.195

	Mean	Stdev
rise-5-AXGT	3.429	0.263

	Mean	Stdev
roll-5-AXGT	-2.751	4.411

	Mean	Stdev
shift-5-AXGT	0.000	0.832

	Mean	Stdev
slide-5-AXGT	-0.935	0.434

	Mean	Stdev
tilt-5-AXGT	0.000	3.481

	Mean	Stdev
twist-5-AXGT	32.348	3.444

	Mean	Stdev
rise-6-XGXG	3.352	0.324

	Mean	Stdev
roll-6-XGXG	12.986	6.041

	Mean	Stdev
shift-6-XGXG	0.000	0.587

	Mean	Stdev
slide-6-XGXG	-0.113	0.498

	Mean	Stdev
tilt-6-XGXG	0.000	4.289

	Mean	Stdev
twist-6-XGXG	33.860	4.889

	Mean	Stdev
rise-7-GTAX	3.438	0.262

	Mean	Stdev
roll-7-GTAX	-2.725	4.390

	Mean	Stdev
shift-7-GTAX	0.000	0.835

	Mean	Stdev
slide-7-GTAX	-0.921	0.409

	Mean	Stdev
tilt-7-GTAX	0.000	3.412

	Mean	Stdev
twist-7-GTAX	32.390	3.418

	Mean	Stdev
rise-8-TCGA	3.341	0.271

	Mean	Stdev
roll-8-TCGA	1.131	5.333

	Mean	Stdev
shift-8-TCGA	0.000	1.107

	Mean	Stdev
slide-8-TCGA	0.406	0.505

	Mean	Stdev
tilt-8-TCGA	0.000	5.790

	Mean	Stdev
twist-8-TCGA	38.946	3.978

	Mean	Stdev
rise-9-CGCG	3.101	0.314

	Mean	Stdev
roll-9-CGCG	6.121	6.321

	Mean	Stdev
shift-9-CGCG	0.000	0.975

	Mean	Stdev
slide-9-CGCG	0.140	0.591

	Mean	Stdev
tilt-9-CGCG	0.000	6.611

	Mean	Stdev
twist-9-CGCG	32.134	7.090

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