NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	3.164	0.000	0.000	0.014	0.000	0.000
Slide	0.000	4.588	2.410	0.000	-0.071	-0.301
Rise	0.000	2.410	7.297	0.000	-0.089	-0.164
Tilt	0.014	0.000	0.000	0.029	0.000	0.000
Roll	0.000	-0.071	-0.089	0.000	0.028	0.011
Twist	0.000	-0.301	-0.164	0.000	0.011	0.082

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.490	0.000	0.000	0.015	0.000	0.000
Slide	0.000	3.773	3.248	0.000	-0.097	-0.331
Rise	0.000	3.248	11.270	0.000	0.013	-0.138
Tilt	0.015	0.000	0.000	0.044	0.000	0.000
Roll	0.000	-0.097	0.013	0.000	0.040	0.011
Twist	0.000	-0.331	-0.138	0.000	0.011	0.088

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.214	0.000	0.000	-0.019	0.000	0.000
Slide	0.000	3.482	1.682	0.000	-0.109	-0.296
Rise	0.000	1.682	3.926	0.000	-0.046	-0.100
Tilt	-0.019	0.000	0.000	0.026	0.000	0.000
Roll	0.000	-0.109	-0.046	0.000	0.016	0.004
Twist	0.000	-0.296	-0.100	0.000	0.004	0.070

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.314	0.000	0.000	-0.020	0.000	0.000
Slide	0.000	3.675	1.661	0.000	-0.103	-0.334
Rise	0.000	1.660	3.930	0.000	-0.040	-0.095
Tilt	-0.020	0.000	0.000	0.025	0.000	0.000
Roll	0.000	-0.103	-0.040	0.000	0.016	0.003
Twist	0.000	-0.334	-0.095	0.000	0.003	0.078

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	3.108	0.000	0.000	0.016	0.000	0.000
Slide	0.000	4.113	2.484	0.000	-0.040	-0.310
Rise	0.000	2.484	7.050	0.000	-0.122	-0.200
Tilt	0.016	0.000	0.000	0.026	0.000	0.000
Roll	0.000	-0.040	-0.122	0.000	0.023	0.010
Twist	0.000	-0.310	-0.200	0.000	0.010	0.079

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	3.863	0.000	0.000	-0.014	0.000	0.000
Slide	0.000	3.678	3.342	0.000	-0.070	-0.317
Rise	0.000	3.342	12.964	0.000	0.013	-0.201
Tilt	-0.014	0.000	0.000	0.036	0.000	0.000
Roll	0.000	-0.070	0.013	0.000	0.034	0.008
Twist	0.000	-0.317	-0.201	0.000	0.008	0.075

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	3.531	0.000	0.000	-0.016	0.000	0.000
Slide	0.000	3.345	3.218	0.000	-0.067	-0.285
Rise	0.000	3.218	12.353	0.000	0.023	-0.224
Tilt	-0.016	0.000	0.000	0.037	0.000	0.000
Roll	0.000	-0.067	0.023	0.000	0.033	0.009
Twist	0.000	-0.285	-0.224	0.000	0.009	0.069

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	3.134	0.000	0.000	0.017	0.000	0.000
Slide	0.000	3.944	2.352	0.000	-0.043	-0.302
Rise	0.000	2.352	6.970	0.000	-0.108	-0.193
Tilt	0.017	0.000	0.000	0.027	0.000	0.000
Roll	0.000	-0.043	-0.108	0.000	0.024	0.011
Twist	0.000	-0.302	-0.193	0.000	0.011	0.077

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	3.320	0.000	0.000	0.021	0.000	0.000
Slide	0.000	4.979	2.566	0.000	-0.063	-0.340
Rise	0.000	2.566	7.279	0.000	-0.085	-0.154
Tilt	0.021	0.000	0.000	0.029	0.000	0.000
Roll	0.000	-0.063	-0.085	0.000	0.028	0.008
Twist	0.000	-0.340	-0.154	0.000	0.008	0.090

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.380	0.247

	Mean	Stdev
roll-10-GCGC	0.516	4.290

	Mean	Stdev
shift-10-GCGC	0.000	0.390

	Mean	Stdev
slide-10-GCGC	-1.722	0.574

	Mean	Stdev
tilt-10-GCGC	0.000	4.011

	Mean	Stdev
twist-10-GCGC	32.357	3.546

	Mean	Stdev
rise-2-GCGC	3.370	0.256

	Mean	Stdev
roll-2-GCGC	0.645	4.349

	Mean	Stdev
shift-2-GCGC	0.000	0.408

	Mean	Stdev
slide-2-GCGC	-1.683	0.593

	Mean	Stdev
tilt-2-GCGC	0.000	3.998

	Mean	Stdev
twist-2-GCGC	32.391	3.642

	Mean	Stdev
rise-3-CGCG	3.650	0.438

	Mean	Stdev
roll-3-CGCG	3.766	7.066

	Mean	Stdev
shift-3-CGCG	0.000	0.516

	Mean	Stdev
slide-3-CGCG	-1.920	0.645

	Mean	Stdev
tilt-3-CGCG	0.000	4.795

	Mean	Stdev
twist-3-CGCG	32.126	3.732

	Mean	Stdev
rise-4-GATC	3.387	0.338

	Mean	Stdev
roll-4-GATC	3.395	5.421

	Mean	Stdev
shift-4-GATC	0.000	0.435

	Mean	Stdev
slide-4-GATC	-1.643	0.493

	Mean	Stdev
tilt-4-GATC	0.000	4.757

	Mean	Stdev
twist-4-GATC	32.897	3.338

	Mean	Stdev
rise-5-AATT	3.222	0.314

	Mean	Stdev
roll-5-AATT	0.647	4.755

	Mean	Stdev
shift-5-AATT	0.000	0.431

	Mean	Stdev
slide-5-AATT	-1.491	0.441

	Mean	Stdev
tilt-5-AATT	0.000	4.471

	Mean	Stdev
twist-5-AATT	32.505	3.109

	Mean	Stdev
rise-6-ATAT	3.370	0.273

	Mean	Stdev
roll-6-ATAT	-1.872	4.033

	Mean	Stdev
shift-6-ATAT	0.000	0.486

	Mean	Stdev
slide-6-ATAT	-1.803	0.579

	Mean	Stdev
tilt-6-ATAT	0.000	3.636

	Mean	Stdev
twist-6-ATAT	32.163	3.237

	Mean	Stdev
rise-7-TTAA	3.233	0.317

	Mean	Stdev
roll-7-TTAA	0.330	4.661

	Mean	Stdev
shift-7-TTAA	0.000	0.421

	Mean	Stdev
slide-7-TTAA	-1.494	0.433

	Mean	Stdev
tilt-7-TTAA	0.000	4.481

	Mean	Stdev
twist-7-TTAA	32.681	2.985

	Mean	Stdev
rise-8-TCGA	3.380	0.333

	Mean	Stdev
roll-8-TCGA	3.139	5.292

	Mean	Stdev
shift-8-TCGA	0.000	0.433

	Mean	Stdev
slide-8-TCGA	-1.642	0.499

	Mean	Stdev
tilt-8-TCGA	0.000	4.664

	Mean	Stdev
twist-8-TCGA	32.996	3.378

	Mean	Stdev
rise-9-CGCG	3.656	0.435

	Mean	Stdev
roll-9-CGCG	3.277	6.934

	Mean	Stdev
shift-9-CGCG	0.000	0.505

	Mean	Stdev
slide-9-CGCG	-1.971	0.637

	Mean	Stdev
tilt-9-CGCG	0.000	4.874

	Mean	Stdev
twist-9-CGCG	31.953	3.652

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