NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.379	0.000	0.000	-0.038	0.000	0.000
Slide	0.000	3.458	1.135	0.000	-0.092	-0.244
Rise	0.000	1.135	7.505	0.000	-0.052	-0.147
Tilt	-0.038	0.000	0.000	0.028	0.000	0.000
Roll	0.000	-0.092	-0.052	0.000	0.025	0.011
Twist	0.000	-0.244	-0.147	0.000	0.011	0.045

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.739	0.000	0.000	0.011	0.000	0.000
Slide	0.000	5.534	2.309	0.000	-0.022	-0.218
Rise	0.000	2.309	9.104	0.000	-0.008	-0.160
Tilt	0.011	0.000	0.000	0.045	0.000	0.000
Roll	0.000	-0.022	-0.008	0.000	0.033	0.009
Twist	0.000	-0.218	-0.160	0.000	0.009	0.070

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.122	0.000	0.000	-0.101	0.000	0.000
Slide	0.000	2.470	0.451	0.000	0.009	-0.090
Rise	0.000	0.451	6.970	0.000	-0.080	-0.206
Tilt	-0.101	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.009	-0.080	0.000	0.017	0.006
Twist	0.000	-0.090	-0.206	0.000	0.006	0.016

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.054	0.000	0.000	-0.112	0.000	0.000
Slide	0.000	2.371	0.419	0.000	0.015	-0.090
Rise	0.000	0.419	6.779	0.000	-0.072	-0.208
Tilt	-0.112	0.000	0.000	0.027	0.000	0.000
Roll	0.000	0.015	-0.072	0.000	0.016	0.007
Twist	0.000	-0.090	-0.208	0.000	0.007	0.017

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.929	0.000	0.000	-0.060	0.000	0.000
Slide	0.000	1.890	1.383	0.000	-0.045	-0.119
Rise	0.000	1.383	7.252	0.000	-0.036	-0.168
Tilt	-0.060	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.045	-0.036	0.000	0.023	0.012
Twist	0.000	-0.119	-0.168	0.000	0.012	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.116	0.000	0.000	-0.098	0.000	0.000
Slide	0.000	3.240	1.857	0.000	0.063	-0.106
Rise	0.000	1.857	9.364	0.000	0.121	-0.178
Tilt	-0.098	0.000	0.000	0.040	0.000	0.000
Roll	0.000	0.063	0.121	0.000	0.022	0.010
Twist	0.000	-0.106	-0.178	0.000	0.010	0.028

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.165	0.000	0.000	-0.103	0.000	0.000
Slide	0.000	3.439	2.645	0.000	0.085	-0.144
Rise	0.000	2.645	10.593	0.000	0.160	-0.232
Tilt	-0.103	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.085	0.159	0.000	0.023	0.008
Twist	0.000	-0.144	-0.232	0.000	0.008	0.033

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.846	0.000	0.000	-0.063	0.000	0.000
Slide	0.000	2.005	1.233	0.000	-0.059	-0.132
Rise	0.000	1.233	6.928	0.000	-0.044	-0.160
Tilt	-0.063	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.059	-0.044	0.000	0.025	0.013
Twist	0.000	-0.132	-0.160	0.000	0.013	0.026

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.489	0.000	0.000	-0.045	0.000	0.000
Slide	0.000	3.570	1.423	0.000	-0.091	-0.247
Rise	0.000	1.423	7.767	0.000	-0.057	-0.163
Tilt	-0.045	0.000	0.000	0.028	0.000	0.000
Roll	0.000	-0.091	-0.057	0.000	0.025	0.011
Twist	0.000	-0.247	-0.163	0.000	0.011	0.047

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.347	0.301

	Mean	Stdev
roll-10-GCGC	-2.029	6.757

	Mean	Stdev
shift-10-GCGC	0.000	0.817

	Mean	Stdev
slide-10-GCGC	-0.096	0.504

	Mean	Stdev
tilt-10-GCGC	0.000	4.316

	Mean	Stdev
twist-10-GCGC	32.723	6.292

	Mean	Stdev
rise-2-GCGC	3.356	0.294

	Mean	Stdev
roll-2-GCGC	-2.358	6.474

	Mean	Stdev
shift-2-GCGC	0.000	0.802

	Mean	Stdev
slide-2-GCGC	-0.153	0.524

	Mean	Stdev
tilt-2-GCGC	0.000	4.246

	Mean	Stdev
twist-2-GCGC	33.624	5.756

	Mean	Stdev
rise-3-CGCG	3.131	0.378

	Mean	Stdev
roll-3-CGCG	8.820	6.649

	Mean	Stdev
shift-3-CGCG	0.000	0.880

	Mean	Stdev
slide-3-CGCG	0.114	0.584

	Mean	Stdev
tilt-3-CGCG	0.000	5.593

	Mean	Stdev
twist-3-CGCG	29.822	9.480

	Mean	Stdev
rise-4-GATC	3.374	0.320

	Mean	Stdev
roll-4-GATC	3.093	6.019

	Mean	Stdev
shift-4-GATC	0.000	0.847

	Mean	Stdev
slide-4-GATC	0.042	0.688

	Mean	Stdev
tilt-4-GATC	0.000	4.578

	Mean	Stdev
twist-4-GATC	34.429	7.230

	Mean	Stdev
rise-5-AATT	3.371	0.290

	Mean	Stdev
roll-5-AATT	2.649	5.143

	Mean	Stdev
shift-5-AATT	0.000	0.665

	Mean	Stdev
slide-5-AATT	-0.299	0.531

	Mean	Stdev
tilt-5-AATT	0.000	4.667

	Mean	Stdev
twist-5-AATT	35.677	4.662

	Mean	Stdev
rise-6-ATAT	3.352	0.270

	Mean	Stdev
roll-6-ATAT	-0.538	4.293

	Mean	Stdev
shift-6-ATAT	0.000	0.581

	Mean	Stdev
slide-6-ATAT	-0.825	0.362

	Mean	Stdev
tilt-6-ATAT	0.000	3.630

	Mean	Stdev
twist-6-ATAT	32.385	3.158

	Mean	Stdev
rise-7-TTAA	3.375	0.288

	Mean	Stdev
roll-7-TTAA	2.770	5.130

	Mean	Stdev
shift-7-TTAA	0.000	0.644

	Mean	Stdev
slide-7-TTAA	-0.274	0.520

	Mean	Stdev
tilt-7-TTAA	0.000	4.723

	Mean	Stdev
twist-7-TTAA	35.819	4.570

	Mean	Stdev
rise-8-TCGA	3.371	0.319

	Mean	Stdev
roll-8-TCGA	3.296	5.690

	Mean	Stdev
shift-8-TCGA	0.000	0.904

	Mean	Stdev
slide-8-TCGA	0.106	0.670

	Mean	Stdev
tilt-8-TCGA	0.000	4.704

	Mean	Stdev
twist-8-TCGA	34.448	6.799

	Mean	Stdev
rise-9-CGCG	3.154	0.384

	Mean	Stdev
roll-9-CGCG	7.820	6.982

	Mean	Stdev
shift-9-CGCG	0.000	0.992

	Mean	Stdev
slide-9-CGCG	0.194	0.605

	Mean	Stdev
tilt-9-CGCG	0.000	6.144

	Mean	Stdev
twist-9-CGCG	31.083	9.391

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