NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.446	0.000	0.000	-0.070	0.000	0.000
Slide	0.000	3.063	1.378	0.000	-0.057	-0.190
Rise	0.000	1.378	8.165	0.000	-0.052	-0.160
Tilt	-0.070	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.057	-0.052	0.000	0.025	0.006
Twist	0.000	-0.190	-0.160	0.000	0.006	0.040

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.318	0.000	0.000	0.002	0.000	0.000
Slide	0.000	5.579	2.977	0.000	-0.017	-0.207
Rise	0.000	2.977	11.118	0.000	0.046	-0.161
Tilt	0.002	0.000	0.000	0.046	0.000	0.000
Roll	0.000	-0.017	0.046	0.000	0.036	0.006
Twist	0.000	-0.207	-0.161	0.000	0.006	0.067

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.943	0.000	0.000	-0.108	0.000	0.000
Slide	0.000	2.587	0.495	0.000	0.005	-0.116
Rise	0.000	0.496	7.852	0.000	-0.085	-0.232
Tilt	-0.108	0.000	0.000	0.026	0.000	0.000
Roll	0.000	0.005	-0.085	0.000	0.016	0.007
Twist	0.000	-0.116	-0.232	0.000	0.007	0.023

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.950	0.000	0.000	-0.111	0.000	0.000
Slide	0.000	2.684	0.505	0.000	0.017	-0.121
Rise	0.000	0.505	8.139	0.000	-0.092	-0.243
Tilt	-0.111	0.000	0.000	0.026	0.000	0.000
Roll	0.000	0.017	-0.092	0.000	0.017	0.007
Twist	0.000	-0.121	-0.243	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.790	0.000	0.000	-0.077	0.000	0.000
Slide	0.000	2.042	1.400	0.000	-0.037	-0.127
Rise	0.000	1.400	7.768	0.000	-0.051	-0.177
Tilt	-0.077	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.037	-0.051	0.000	0.022	0.009
Twist	0.000	-0.127	-0.177	0.000	0.009	0.028

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.104	0.000	0.000	-0.119	0.000	0.000
Slide	0.000	3.212	2.296	0.000	0.067	-0.074
Rise	0.000	2.296	10.756	0.000	0.134	-0.192
Tilt	-0.119	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.067	0.134	0.000	0.024	0.005
Twist	0.000	-0.074	-0.192	0.000	0.005	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.092	0.000	0.000	-0.117	0.000	0.000
Slide	0.000	3.144	2.267	0.000	0.069	-0.079
Rise	0.000	2.267	11.024	0.000	0.139	-0.199
Tilt	-0.117	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.069	0.139	0.000	0.024	0.005
Twist	0.000	-0.079	-0.199	0.000	0.005	0.028

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.785	0.000	0.000	-0.080	0.000	0.000
Slide	0.000	2.106	1.410	0.000	-0.042	-0.132
Rise	0.000	1.410	7.883	0.000	-0.050	-0.176
Tilt	-0.080	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.042	-0.050	0.000	0.022	0.010
Twist	0.000	-0.132	-0.176	0.000	0.010	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.439	0.000	0.000	-0.063	0.000	0.000
Slide	0.000	3.075	1.408	0.000	-0.070	-0.189
Rise	0.000	1.408	7.645	0.000	-0.050	-0.154
Tilt	-0.063	0.000	0.000	0.030	0.000	0.000
Roll	0.000	-0.070	-0.050	0.000	0.024	0.007
Twist	0.000	-0.189	-0.154	0.000	0.007	0.042

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.389	0.279

	Mean	Stdev
roll-10-GCGC	-1.881	5.607

	Mean	Stdev
shift-10-GCGC	0.000	0.874

	Mean	Stdev
slide-10-GCGC	-0.267	0.480

	Mean	Stdev
tilt-10-GCGC	0.000	4.479

	Mean	Stdev
twist-10-GCGC	32.797	5.591

	Mean	Stdev
rise-2-GCGC	3.391	0.273

	Mean	Stdev
roll-2-GCGC	-1.965	5.583

	Mean	Stdev
shift-2-GCGC	0.000	0.878

	Mean	Stdev
slide-2-GCGC	-0.247	0.486

	Mean	Stdev
tilt-2-GCGC	0.000	4.503

	Mean	Stdev
twist-2-GCGC	33.309	5.268

	Mean	Stdev
rise-3-CGCG	3.131	0.331

	Mean	Stdev
roll-3-CGCG	6.205	6.582

	Mean	Stdev
shift-3-CGCG	0.000	1.087

	Mean	Stdev
slide-3-CGCG	0.139	0.564

	Mean	Stdev
tilt-3-CGCG	0.000	6.513

	Mean	Stdev
twist-3-CGCG	32.843	7.256

	Mean	Stdev
rise-4-GATC	3.376	0.303

	Mean	Stdev
roll-4-GATC	2.416	5.573

	Mean	Stdev
shift-4-GATC	0.000	0.986

	Mean	Stdev
slide-4-GATC	-0.036	0.646

	Mean	Stdev
tilt-4-GATC	0.000	4.946

	Mean	Stdev
twist-4-GATC	35.245	5.965

	Mean	Stdev
rise-5-AATT	3.371	0.283

	Mean	Stdev
roll-5-AATT	1.205	5.028

	Mean	Stdev
shift-5-AATT	0.000	0.675

	Mean	Stdev
slide-5-AATT	-0.477	0.530

	Mean	Stdev
tilt-5-AATT	0.000	4.646

	Mean	Stdev
twist-5-AATT	36.346	4.615

	Mean	Stdev
rise-6-ATAT	3.352	0.250

	Mean	Stdev
roll-6-ATAT	-1.900	4.093

	Mean	Stdev
shift-6-ATAT	0.000	0.503

	Mean	Stdev
slide-6-ATAT	-0.955	0.367

	Mean	Stdev
tilt-6-ATAT	0.000	3.561

	Mean	Stdev
twist-6-ATAT	32.896	3.174

	Mean	Stdev
rise-7-TTAA	3.367	0.293

	Mean	Stdev
roll-7-TTAA	1.115	5.101

	Mean	Stdev
shift-7-TTAA	0.000	0.670

	Mean	Stdev
slide-7-TTAA	-0.486	0.529

	Mean	Stdev
tilt-7-TTAA	0.000	4.668

	Mean	Stdev
twist-7-TTAA	36.334	4.500

	Mean	Stdev
rise-8-TCGA	3.370	0.299

	Mean	Stdev
roll-8-TCGA	2.428	5.560

	Mean	Stdev
shift-8-TCGA	0.000	0.999

	Mean	Stdev
slide-8-TCGA	0.008	0.634

	Mean	Stdev
tilt-8-TCGA	0.000	4.933

	Mean	Stdev
twist-8-TCGA	35.434	5.769

	Mean	Stdev
rise-9-CGCG	3.133	0.327

	Mean	Stdev
roll-9-CGCG	6.121	6.506

	Mean	Stdev
shift-9-CGCG	0.000	1.111

	Mean	Stdev
slide-9-CGCG	0.160	0.564

	Mean	Stdev
tilt-9-CGCG	0.000	6.733

	Mean	Stdev
twist-9-CGCG	33.322	7.210

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