NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.230	0.000	0.000	-0.109	0.000	0.000
Slide	0.000	2.938	1.127	0.000	-0.064	-0.193
Rise	0.000	1.127	8.463	0.000	-0.048	-0.156
Tilt	-0.109	0.000	0.000	0.034	0.000	0.000
Roll	0.000	-0.064	-0.048	0.000	0.025	0.008
Twist	0.000	-0.193	-0.156	0.000	0.008	0.046

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.741	0.000	0.000	-0.009	0.000	0.000
Slide	0.000	6.395	2.480	0.000	-0.010	-0.266
Rise	0.000	2.480	11.809	0.000	0.062	-0.126
Tilt	-0.009	0.000	0.000	0.050	0.000	0.000
Roll	0.000	-0.010	0.062	0.000	0.038	0.007
Twist	0.000	-0.266	-0.126	0.000	0.007	0.077

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.085	0.000	0.000	-0.132	0.000	0.000
Slide	0.000	2.819	0.410	0.000	0.021	-0.118
Rise	0.000	0.410	8.420	0.000	-0.094	-0.234
Tilt	-0.132	0.000	0.000	0.029	0.000	0.000
Roll	0.000	0.021	-0.094	0.000	0.017	0.006
Twist	0.000	-0.118	-0.234	0.000	0.006	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.915	0.000	0.000	-0.105	0.000	0.000
Slide	0.000	3.279	0.275	0.000	0.016	-0.146
Rise	0.000	0.275	8.867	0.000	-0.104	-0.248
Tilt	-0.105	0.000	0.000	0.025	0.000	0.000
Roll	0.000	0.016	-0.104	0.000	0.017	0.007
Twist	0.000	-0.146	-0.248	0.000	0.007	0.026

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.879	0.000	0.000	-0.094	0.000	0.000
Slide	0.000	2.490	1.296	0.000	-0.033	-0.152
Rise	0.000	1.296	8.636	0.000	-0.056	-0.177
Tilt	-0.094	0.000	0.000	0.035	0.000	0.000
Roll	0.000	-0.033	-0.056	0.000	0.022	0.007
Twist	0.000	-0.152	-0.177	0.000	0.007	0.026

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.016	0.000	0.000	-0.116	0.000	0.000
Slide	0.000	3.289	2.488	0.000	0.070	-0.095
Rise	0.000	2.488	10.855	0.000	0.139	-0.230
Tilt	-0.116	0.000	0.000	0.040	0.000	0.000
Roll	0.000	0.070	0.139	0.000	0.024	0.004
Twist	0.000	-0.095	-0.230	0.000	0.004	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.103	0.000	0.000	-0.120	0.000	0.000
Slide	0.000	3.264	2.326	0.000	0.063	-0.087
Rise	0.000	2.326	10.609	0.000	0.142	-0.200
Tilt	-0.120	0.000	0.000	0.041	0.000	0.000
Roll	0.000	0.063	0.142	0.000	0.026	0.006
Twist	0.000	-0.087	-0.200	0.000	0.006	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.857	0.000	0.000	-0.087	0.000	0.000
Slide	0.000	2.226	1.309	0.000	-0.038	-0.141
Rise	0.000	1.309	7.811	0.000	-0.042	-0.164
Tilt	-0.087	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.038	-0.042	0.000	0.023	0.011
Twist	0.000	-0.141	-0.164	0.000	0.011	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.194	0.000	0.000	-0.093	0.000	0.000
Slide	0.000	2.917	1.258	0.000	-0.035	-0.180
Rise	0.000	1.258	8.350	0.000	-0.034	-0.154
Tilt	-0.093	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.035	-0.034	0.000	0.025	0.005
Twist	0.000	-0.180	-0.154	0.000	0.005	0.044

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.363	0.283

	Mean	Stdev
roll-10-GCGC	-2.444	5.622

	Mean	Stdev
shift-10-GCGC	0.000	0.924

	Mean	Stdev
slide-10-GCGC	-0.212	0.483

	Mean	Stdev
tilt-10-GCGC	0.000	4.632

	Mean	Stdev
twist-10-GCGC	32.904	5.264

	Mean	Stdev
rise-2-GCGC	3.348	0.285

	Mean	Stdev
roll-2-GCGC	-1.689	5.395

	Mean	Stdev
shift-2-GCGC	0.000	0.881

	Mean	Stdev
slide-2-GCGC	-0.183	0.479

	Mean	Stdev
tilt-2-GCGC	0.000	4.566

	Mean	Stdev
twist-2-GCGC	32.263	5.820

	Mean	Stdev
rise-3-CGCG	3.178	0.317

	Mean	Stdev
roll-3-CGCG	5.469	6.331

	Mean	Stdev
shift-3-CGCG	0.000	1.092

	Mean	Stdev
slide-3-CGCG	0.212	0.539

	Mean	Stdev
tilt-3-CGCG	0.000	6.636

	Mean	Stdev
twist-3-CGCG	35.271	6.921

	Mean	Stdev
rise-4-GATC	3.324	0.282

	Mean	Stdev
roll-4-GATC	1.640	5.475

	Mean	Stdev
shift-4-GATC	0.000	0.965

	Mean	Stdev
slide-4-GATC	-0.013	0.611

	Mean	Stdev
tilt-4-GATC	0.000	4.799

	Mean	Stdev
twist-4-GATC	33.747	6.463

	Mean	Stdev
rise-5-AATT	3.371	0.274

	Mean	Stdev
roll-5-AATT	0.833	4.985

	Mean	Stdev
shift-5-AATT	0.000	0.814

	Mean	Stdev
slide-5-AATT	-0.233	0.532

	Mean	Stdev
tilt-5-AATT	0.000	4.885

	Mean	Stdev
twist-5-AATT	37.818	4.263

	Mean	Stdev
rise-6-ATAT	3.336	0.234

	Mean	Stdev
roll-6-ATAT	-2.383	3.973

	Mean	Stdev
shift-6-ATAT	0.000	0.463

	Mean	Stdev
slide-6-ATAT	-0.906	0.338

	Mean	Stdev
tilt-6-ATAT	0.000	3.413

	Mean	Stdev
twist-6-ATAT	32.937	3.008

	Mean	Stdev
rise-7-TTAA	3.376	0.277

	Mean	Stdev
roll-7-TTAA	0.572	4.938

	Mean	Stdev
shift-7-TTAA	0.000	0.792

	Mean	Stdev
slide-7-TTAA	-0.322	0.527

	Mean	Stdev
tilt-7-TTAA	0.000	4.730

	Mean	Stdev
twist-7-TTAA	37.567	4.318

	Mean	Stdev
rise-8-TCGA	3.368	0.296

	Mean	Stdev
roll-8-TCGA	2.479	5.588

	Mean	Stdev
shift-8-TCGA	0.000	0.968

	Mean	Stdev
slide-8-TCGA	0.019	0.627

	Mean	Stdev
tilt-8-TCGA	0.000	4.969

	Mean	Stdev
twist-8-TCGA	34.937	6.031

	Mean	Stdev
rise-9-CGCG	3.143	0.313

	Mean	Stdev
roll-9-CGCG	5.494	6.477

	Mean	Stdev
shift-9-CGCG	0.000	1.113

	Mean	Stdev
slide-9-CGCG	0.208	0.527

	Mean	Stdev
tilt-9-CGCG	0.000	6.716

	Mean	Stdev
twist-9-CGCG	34.005	7.060

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