NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.232	0.000	0.000	-0.092	0.000	0.000
Slide	0.000	2.864	1.107	0.000	-0.052	-0.177
Rise	0.000	1.107	8.519	0.000	-0.040	-0.157
Tilt	-0.092	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.052	-0.040	0.000	0.025	0.007
Twist	0.000	-0.177	-0.157	0.000	0.007	0.042

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.564	0.000	0.000	-0.002	0.000	0.000
Slide	0.000	5.501	2.272	0.000	-0.014	-0.170
Rise	0.000	2.272	11.627	0.000	0.066	-0.102
Tilt	-0.002	0.000	0.000	0.049	0.000	0.000
Roll	0.000	-0.014	0.066	0.000	0.038	0.006
Twist	0.000	-0.170	-0.102	0.000	0.006	0.063

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.953	0.000	0.000	-0.118	0.000	0.000
Slide	0.000	3.164	0.539	0.000	0.008	-0.138
Rise	0.000	0.539	8.426	0.000	-0.082	-0.231
Tilt	-0.118	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.008	-0.082	0.000	0.017	0.007
Twist	0.000	-0.138	-0.231	0.000	0.007	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.987	0.000	0.000	-0.122	0.000	0.000
Slide	0.000	2.932	0.318	0.000	0.008	-0.128
Rise	0.000	0.318	8.820	0.000	-0.108	-0.236
Tilt	-0.122	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.008	-0.108	0.000	0.018	0.007
Twist	0.000	-0.128	-0.236	0.000	0.007	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.836	0.000	0.000	-0.083	0.000	0.000
Slide	0.000	2.172	1.235	0.000	-0.029	-0.130
Rise	0.000	1.235	7.888	0.000	-0.052	-0.187
Tilt	-0.083	0.000	0.000	0.034	0.000	0.000
Roll	0.000	-0.029	-0.052	0.000	0.023	0.010
Twist	0.000	-0.130	-0.187	0.000	0.010	0.027

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.156	0.000	0.000	-0.127	0.000	0.000
Slide	0.000	3.173	2.536	0.000	0.073	-0.084
Rise	0.000	2.536	10.852	0.000	0.138	-0.227
Tilt	-0.127	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.073	0.138	0.000	0.027	0.007
Twist	0.000	-0.084	-0.227	0.000	0.007	0.031

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.157	0.000	0.000	-0.132	0.000	0.000
Slide	0.000	3.152	2.492	0.000	0.075	-0.090
Rise	0.000	2.492	10.810	0.000	0.148	-0.233
Tilt	-0.132	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.075	0.148	0.000	0.026	0.006
Twist	0.000	-0.090	-0.233	0.000	0.006	0.033

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.864	0.000	0.000	-0.084	0.000	0.000
Slide	0.000	2.286	1.555	0.000	-0.035	-0.147
Rise	0.000	1.555	8.410	0.000	-0.055	-0.180
Tilt	-0.084	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.035	-0.055	0.000	0.023	0.009
Twist	0.000	-0.147	-0.180	0.000	0.009	0.027

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.227	0.000	0.000	-0.087	0.000	0.000
Slide	0.000	2.959	1.200	0.000	-0.035	-0.175
Rise	0.000	1.200	8.523	0.000	-0.045	-0.155
Tilt	-0.087	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.035	-0.045	0.000	0.024	0.005
Twist	0.000	-0.175	-0.155	0.000	0.005	0.042

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.358	0.285

	Mean	Stdev
roll-10-GCGC	-1.779	5.357

	Mean	Stdev
shift-10-GCGC	0.000	0.872

	Mean	Stdev
slide-10-GCGC	-0.217	0.493

	Mean	Stdev
tilt-10-GCGC	0.000	4.580

	Mean	Stdev
twist-10-GCGC	33.100	5.207

	Mean	Stdev
rise-2-GCGC	3.357	0.286

	Mean	Stdev
roll-2-GCGC	-1.648	5.456

	Mean	Stdev
shift-2-GCGC	0.000	0.887

	Mean	Stdev
slide-2-GCGC	-0.188	0.494

	Mean	Stdev
tilt-2-GCGC	0.000	4.651

	Mean	Stdev
twist-2-GCGC	33.339	4.992

	Mean	Stdev
rise-3-CGCG	3.163	0.311

	Mean	Stdev
roll-3-CGCG	5.136	6.362

	Mean	Stdev
shift-3-CGCG	0.000	1.133

	Mean	Stdev
slide-3-CGCG	0.194	0.516

	Mean	Stdev
tilt-3-CGCG	0.000	6.608

	Mean	Stdev
twist-3-CGCG	34.327	6.893

	Mean	Stdev
rise-4-GATC	3.354	0.300

	Mean	Stdev
roll-4-GATC	2.361	5.551

	Mean	Stdev
shift-4-GATC	0.000	0.965

	Mean	Stdev
slide-4-GATC	-0.010	0.621

	Mean	Stdev
tilt-4-GATC	0.000	4.800

	Mean	Stdev
twist-4-GATC	34.550	6.216

	Mean	Stdev
rise-5-AATT	3.369	0.274

	Mean	Stdev
roll-5-AATT	0.746	4.971

	Mean	Stdev
shift-5-AATT	0.000	0.779

	Mean	Stdev
slide-5-AATT	-0.310	0.532

	Mean	Stdev
tilt-5-AATT	0.000	4.842

	Mean	Stdev
twist-5-AATT	37.663	4.466

	Mean	Stdev
rise-6-ATAT	3.335	0.236

	Mean	Stdev
roll-6-ATAT	-2.373	3.960

	Mean	Stdev
shift-6-ATAT	0.000	0.478

	Mean	Stdev
slide-6-ATAT	-0.906	0.354

	Mean	Stdev
tilt-6-ATAT	0.000	3.467

	Mean	Stdev
twist-6-ATAT	32.641	3.215

	Mean	Stdev
rise-7-TTAA	3.352	0.274

	Mean	Stdev
roll-7-TTAA	0.706	5.063

	Mean	Stdev
shift-7-TTAA	0.000	0.773

	Mean	Stdev
slide-7-TTAA	-0.322	0.519

	Mean	Stdev
tilt-7-TTAA	0.000	4.897

	Mean	Stdev
twist-7-TTAA	37.402	4.414

	Mean	Stdev
rise-8-TCGA	3.357	0.290

	Mean	Stdev
roll-8-TCGA	2.512	5.440

	Mean	Stdev
shift-8-TCGA	0.000	0.952

	Mean	Stdev
slide-8-TCGA	-0.069	0.641

	Mean	Stdev
tilt-8-TCGA	0.000	4.895

	Mean	Stdev
twist-8-TCGA	34.222	6.337

	Mean	Stdev
rise-9-CGCG	3.168	0.309

	Mean	Stdev
roll-9-CGCG	5.577	6.259

	Mean	Stdev
shift-9-CGCG	0.000	1.136

	Mean	Stdev
slide-9-CGCG	0.209	0.534

	Mean	Stdev
tilt-9-CGCG	0.000	6.728

	Mean	Stdev
twist-9-CGCG	34.358	6.926

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