NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.363	0.000	0.000	-0.072	0.000	0.000
Slide	0.000	3.132	1.590	0.000	-0.061	-0.207
Rise	0.000	1.590	8.063	0.000	-0.051	-0.174
Tilt	-0.072	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.061	-0.051	0.000	0.025	0.006
Twist	0.000	-0.207	-0.174	0.000	0.006	0.043

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.357	0.000	0.000	-0.002	0.000	0.000
Slide	0.000	5.509	2.741	0.000	-0.027	-0.220
Rise	0.000	2.741	10.866	0.000	0.046	-0.134
Tilt	-0.002	0.000	0.000	0.047	0.000	0.000
Roll	0.000	-0.027	0.046	0.000	0.037	0.008
Twist	0.000	-0.220	-0.134	0.000	0.008	0.073

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.936	0.000	0.000	-0.115	0.000	0.000
Slide	0.000	2.722	0.452	0.000	0.003	-0.126
Rise	0.000	0.452	8.305	0.000	-0.087	-0.244
Tilt	-0.115	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.003	-0.087	0.000	0.017	0.007
Twist	0.000	-0.126	-0.244	0.000	0.007	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.034	0.000	0.000	-0.119	0.000	0.000
Slide	0.000	2.893	0.307	0.000	0.011	-0.122
Rise	0.000	0.307	8.550	0.000	-0.096	-0.237
Tilt	-0.119	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.011	-0.096	0.000	0.017	0.007
Twist	0.000	-0.122	-0.237	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.814	0.000	0.000	-0.084	0.000	0.000
Slide	0.000	2.110	1.390	0.000	-0.042	-0.130
Rise	0.000	1.390	7.850	0.000	-0.053	-0.177
Tilt	-0.084	0.000	0.000	0.034	0.000	0.000
Roll	0.000	-0.042	-0.053	0.000	0.023	0.011
Twist	0.000	-0.130	-0.177	0.000	0.011	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.143	0.000	0.000	-0.123	0.000	0.000
Slide	0.000	3.123	2.229	0.000	0.064	-0.081
Rise	0.000	2.229	10.603	0.000	0.127	-0.196
Tilt	-0.123	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.064	0.127	0.000	0.023	0.004
Twist	0.000	-0.081	-0.196	0.000	0.004	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.055	0.000	0.000	-0.112	0.000	0.000
Slide	0.000	3.067	2.130	0.000	0.070	-0.089
Rise	0.000	2.130	10.434	0.000	0.128	-0.215
Tilt	-0.112	0.000	0.000	0.039	0.000	0.000
Roll	0.000	0.070	0.128	0.000	0.025	0.006
Twist	0.000	-0.089	-0.215	0.000	0.006	0.034

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.830	0.000	0.000	-0.080	0.000	0.000
Slide	0.000	2.158	1.489	0.000	-0.041	-0.132
Rise	0.000	1.489	8.000	0.000	-0.047	-0.172
Tilt	-0.080	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.041	-0.047	0.000	0.020	0.007
Twist	0.000	-0.132	-0.172	0.000	0.007	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.416	0.000	0.000	-0.071	0.000	0.000
Slide	0.000	3.036	1.262	0.000	-0.069	-0.200
Rise	0.000	1.262	7.711	0.000	-0.040	-0.144
Tilt	-0.071	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.069	-0.040	0.000	0.025	0.007
Twist	0.000	-0.200	-0.144	0.000	0.007	0.043

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.391	0.280

	Mean	Stdev
roll-10-GCGC	-2.109	5.560

	Mean	Stdev
shift-10-GCGC	0.000	0.864

	Mean	Stdev
slide-10-GCGC	-0.260	0.489

	Mean	Stdev
tilt-10-GCGC	0.000	4.497

	Mean	Stdev
twist-10-GCGC	32.982	5.676

	Mean	Stdev
rise-2-GCGC	3.398	0.279

	Mean	Stdev
roll-2-GCGC	-1.941	5.520

	Mean	Stdev
shift-2-GCGC	0.000	0.894

	Mean	Stdev
slide-2-GCGC	-0.243	0.494

	Mean	Stdev
tilt-2-GCGC	0.000	4.648

	Mean	Stdev
twist-2-GCGC	33.766	4.866

	Mean	Stdev
rise-3-CGCG	3.135	0.324

	Mean	Stdev
roll-3-CGCG	5.980	6.552

	Mean	Stdev
shift-3-CGCG	0.000	1.124

	Mean	Stdev
slide-3-CGCG	0.165	0.561

	Mean	Stdev
tilt-3-CGCG	0.000	6.519

	Mean	Stdev
twist-3-CGCG	33.040	7.265

	Mean	Stdev
rise-4-GATC	3.372	0.299

	Mean	Stdev
roll-4-GATC	2.722	5.516

	Mean	Stdev
shift-4-GATC	0.000	0.985

	Mean	Stdev
slide-4-GATC	-0.002	0.627

	Mean	Stdev
tilt-4-GATC	0.000	4.842

	Mean	Stdev
twist-4-GATC	35.482	5.713

	Mean	Stdev
rise-5-AATT	3.377	0.288

	Mean	Stdev
roll-5-AATT	1.015	4.945

	Mean	Stdev
shift-5-AATT	0.000	0.700

	Mean	Stdev
slide-5-AATT	-0.473	0.540

	Mean	Stdev
tilt-5-AATT	0.000	4.638

	Mean	Stdev
twist-5-AATT	36.358	4.572

	Mean	Stdev
rise-6-ATAT	3.338	0.250

	Mean	Stdev
roll-6-ATAT	-1.785	4.079

	Mean	Stdev
shift-6-ATAT	0.000	0.499

	Mean	Stdev
slide-6-ATAT	-0.947	0.368

	Mean	Stdev
tilt-6-ATAT	0.000	3.516

	Mean	Stdev
twist-6-ATAT	32.956	3.069

	Mean	Stdev
rise-7-TTAA	3.374	0.288

	Mean	Stdev
roll-7-TTAA	1.116	5.042

	Mean	Stdev
shift-7-TTAA	0.000	0.683

	Mean	Stdev
slide-7-TTAA	-0.491	0.541

	Mean	Stdev
tilt-7-TTAA	0.000	4.559

	Mean	Stdev
twist-7-TTAA	36.368	4.495

	Mean	Stdev
rise-8-TCGA	3.382	0.298

	Mean	Stdev
roll-8-TCGA	2.035	5.721

	Mean	Stdev
shift-8-TCGA	0.000	0.962

	Mean	Stdev
slide-8-TCGA	-0.065	0.644

	Mean	Stdev
tilt-8-TCGA	0.000	4.885

	Mean	Stdev
twist-8-TCGA	35.012	6.176

	Mean	Stdev
rise-9-CGCG	3.125	0.317

	Mean	Stdev
roll-9-CGCG	6.392	6.483

	Mean	Stdev
shift-9-CGCG	0.000	1.048

	Mean	Stdev
slide-9-CGCG	0.157	0.542

	Mean	Stdev
tilt-9-CGCG	0.000	6.322

	Mean	Stdev
twist-9-CGCG	32.953	7.246

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