Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 
| 5' | C | - | T | - | G | - | C | - | T | - | A | - | T | - | A | - | A | - | A | - | A | - | G | - | G | - | C | - | T | - | G | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | G | - | A | - | C | - | G | - | A | - | T | - | A | - | T | - | T | - | T | - | T | - | C | - | C | - | G | - | A | - | C | 5' | 
|  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 18 |  | 17 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H41-32_O6-1 | 2.268 | 1.233 | 
|  | Mean | Stdev | 
| 1_N3-32_H1-1 | 2.207 | 1.133 | 
|  | Mean | Stdev | 
| 1_O2-32_H21-1 | 2.165 | 1.145 | 
|  | Mean | Stdev | 
| 10_H61-23_O4-10 | 2.001 | 0.181 | 
|  | Mean | Stdev | 
| 10_N1-23_H3-10 | 1.969 | 0.115 | 
|  | Mean | Stdev | 
| 11_H61-22_O4-11 | 2.013 | 0.192 | 
|  | Mean | Stdev | 
| 11_N1-22_H3-11 | 1.952 | 0.110 | 
|  | Mean | Stdev | 
| 12_H1-21_N3-12 | 1.958 | 0.097 | 
|  | Mean | Stdev | 
| 12_H21-21_O2-12 | 1.871 | 0.116 | 
|  | Mean | Stdev | 
| 12_O6-21_H41-12 | 1.976 | 0.186 | 
|  | Mean | Stdev | 
| 13_H1-20_N3-13 | 1.962 | 0.092 | 
|  | Mean | Stdev | 
| 13_H21-20_O2-13 | 1.888 | 0.119 | 
|  | Mean | Stdev | 
| 13_O6-20_H41-13 | 1.974 | 0.171 | 
|  | Mean | Stdev | 
| 14_H41-19_O6-14 | 2.003 | 0.181 | 
|  | Mean | Stdev | 
| 14_N3-19_H1-14 | 1.975 | 0.100 | 
|  | Mean | Stdev | 
| 14_O2-19_H21-14 | 1.897 | 0.127 | 
|  | Mean | Stdev | 
| 15_H3-18_N1-15 | 1.958 | 0.132 | 
|  | Mean | Stdev | 
| 15_O4-18_H61-15 | 2.026 | 0.251 | 
|  | Mean | Stdev | 
| 16_H1-17_N3-16 | 3.026 | 2.406 | 
|  | Mean | Stdev | 
| 16_H21-17_O2-16 | 2.969 | 2.408 | 
|  | Mean | Stdev | 
| 16_O6-17_H41-16 | 3.097 | 2.572 | 
|  | Mean | Stdev | 
| 2_H3-31_N1-2 | 1.958 | 0.113 | 
|  | Mean | Stdev | 
| 2_O4-31_H61-2 | 2.013 | 0.213 | 
|  | Mean | Stdev | 
| 3_H1-30_N3-3 | 1.966 | 0.097 | 
|  | Mean | Stdev | 
| 3_H21-30_O2-3 | 1.884 | 0.118 | 
|  | Mean | Stdev | 
| 3_O6-30_H41-3 | 1.968 | 0.166 | 
|  | Mean | Stdev | 
| 4_H41-29_O6-4 | 1.999 | 0.177 | 
|  | Mean | Stdev | 
| 4_N3-29_H1-4 | 1.975 | 0.096 | 
|  | Mean | Stdev | 
| 4_O2-29_H21-4 | 1.898 | 0.127 | 
|  | Mean | Stdev | 
| 5_H3-28_N1-5 | 1.956 | 0.119 | 
|  | Mean | Stdev | 
| 5_O4-28_H61-5 | 2.038 | 0.230 | 
|  | Mean | Stdev | 
| 6_H61-27_O4-6 | 2.027 | 0.212 | 
|  | Mean | Stdev | 
| 6_N1-27_H3-6 | 1.988 | 0.124 | 
|  | Mean | Stdev | 
| 7_H3-26_N1-7 | 1.990 | 0.130 | 
|  | Mean | Stdev | 
| 7_O4-26_H61-7 | 2.042 | 0.225 | 
|  | Mean | Stdev | 
| 8_H61-25_O4-8 | 2.024 | 0.203 | 
|  | Mean | Stdev | 
| 8_N1-25_H3-8 | 1.971 | 0.122 | 
|  | Mean | Stdev | 
| 9_H61-24_O4-9 | 2.010 | 0.190 | 
|  | Mean | Stdev | 
| 9_N1-24_H3-9 | 1.970 | 0.119 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | H41-O6_1-32 | 2.2681 | 1.2331 | 
| 1 | N3-H1_1-32 | 2.2070 | 1.1333 | 
| 1 | O2-H21_1-32 | 2.1651 | 1.1448 | 
| 2 | H3-N1_2-31 | 1.9577 | 0.1125 | 
| 2 | O4-H61_2-31 | 2.0126 | 0.2131 | 
| 3 | O6-H41_3-30 | 1.9679 | 0.1663 | 
| 3 | H1-N3_3-30 | 1.9664 | 0.0974 | 
| 3 | H21-O2_3-30 | 1.8844 | 0.1176 | 
| 4 | H41-O6_4-29 | 1.9986 | 0.1770 | 
| 4 | N3-H1_4-29 | 1.9750 | 0.0956 | 
| 4 | O2-H21_4-29 | 1.8979 | 0.1267 | 
| 5 | H3-N1_5-28 | 1.9563 | 0.1190 | 
| 5 | O4-H61_5-28 | 2.0379 | 0.2296 | 
| 6 | N1-H3_6-27 | 1.9876 | 0.1243 | 
| 6 | H61-O4_6-27 | 2.0275 | 0.2121 | 
| 7 | H3-N1_7-26 | 1.9898 | 0.1301 | 
| 7 | O4-H61_7-26 | 2.0421 | 0.2251 | 
| 8 | N1-H3_8-25 | 1.9710 | 0.1216 | 
| 8 | H61-O4_8-25 | 2.0236 | 0.2029 | 
| 9 | N1-H3_9-24 | 1.9702 | 0.1195 | 
| 9 | H61-O4_9-24 | 2.0095 | 0.1903 | 
| 10 | N1-H3_10-23 | 1.9686 | 0.1149 | 
| 10 | H61-O4_10-23 | 2.0013 | 0.1807 | 
| 11 | N1-H3_11-22 | 1.9525 | 0.1103 | 
| 11 | H61-O4_11-22 | 2.0133 | 0.1923 | 
| 12 | O6-H41_12-21 | 1.9758 | 0.1865 | 
| 12 | H1-N3_12-21 | 1.9584 | 0.0970 | 
| 12 | H21-O2_12-21 | 1.8706 | 0.1156 | 
| 13 | O6-H41_13-20 | 1.9738 | 0.1708 | 
| 13 | H1-N3_13-20 | 1.9619 | 0.0920 | 
| 13 | H21-O2_13-20 | 1.8882 | 0.1192 | 
| 14 | H41-O6_14-19 | 2.0031 | 0.1811 | 
| 14 | N3-H1_14-19 | 1.9749 | 0.0996 | 
| 14 | O2-H21_14-19 | 1.8967 | 0.1272 | 
| 15 | H3-N1_15-18 | 1.9581 | 0.1324 | 
| 15 | O4-H61_15-18 | 2.0257 | 0.2514 | 
| 16 | O6-H41_16-17 | 3.0970 | 2.5724 | 
| 16 | H1-N3_16-17 | 3.0263 | 2.4058 | 
| 16 | H21-O2_16-17 | 2.9691 | 2.4084 |