Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | C | - | C | - | A | - | G | - | A | - | A | - | C | - | A | - | T | - | C | - | A | - | A | - | G | - | A | - | A | - | C | - | A | - | G | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | G | - | G | - | T | - | C | - | T | - | T | - | G | - | T | - | A | - | G | - | T | - | T | - | C | - | T | - | T | - | G | - | T | - | C | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H41-36_O6-1 | 2.442 | 1.651 | 
|  | Mean | Stdev | 
| 1_N3-36_H1-1 | 2.408 | 1.544 | 
|  | Mean | Stdev | 
| 1_O2-36_H21-1 | 2.377 | 1.568 | 
|  | Mean | Stdev | 
| 10_H41-27_O6-10 | 1.969 | 0.160 | 
|  | Mean | Stdev | 
| 10_N3-27_H1-10 | 1.971 | 0.093 | 
|  | Mean | Stdev | 
| 10_O2-27_H21-10 | 1.888 | 0.120 | 
|  | Mean | Stdev | 
| 11_H61-26_O4-11 | 1.988 | 0.179 | 
|  | Mean | Stdev | 
| 11_N1-26_H3-11 | 1.972 | 0.120 | 
|  | Mean | Stdev | 
| 12_H61-25_O4-12 | 2.001 | 0.191 | 
|  | Mean | Stdev | 
| 12_N1-25_H3-12 | 1.964 | 0.121 | 
|  | Mean | Stdev | 
| 13_H1-24_N3-13 | 1.963 | 0.094 | 
|  | Mean | Stdev | 
| 13_H21-24_O2-13 | 1.910 | 0.134 | 
|  | Mean | Stdev | 
| 13_O6-24_H41-13 | 1.981 | 0.169 | 
|  | Mean | Stdev | 
| 14_H61-23_O4-14 | 1.978 | 0.175 | 
|  | Mean | Stdev | 
| 14_N1-23_H3-14 | 1.986 | 0.124 | 
|  | Mean | Stdev | 
| 15_H61-22_O4-15 | 1.982 | 0.175 | 
|  | Mean | Stdev | 
| 15_N1-22_H3-15 | 1.973 | 0.120 | 
|  | Mean | Stdev | 
| 16_H41-21_O6-16 | 1.996 | 0.179 | 
|  | Mean | Stdev | 
| 16_N3-21_H1-16 | 1.981 | 0.099 | 
|  | Mean | Stdev | 
| 16_O2-21_H21-16 | 1.887 | 0.121 | 
|  | Mean | Stdev | 
| 17_H61-20_O4-17 | 2.041 | 0.224 | 
|  | Mean | Stdev | 
| 17_N1-20_H3-17 | 1.952 | 0.122 | 
|  | Mean | Stdev | 
| 18_H1-19_N3-18 | 2.421 | 1.527 | 
|  | Mean | Stdev | 
| 18_H21-19_O2-18 | 2.380 | 1.542 | 
|  | Mean | Stdev | 
| 18_O6-19_H41-18 | 2.498 | 1.612 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 1.968 | 0.189 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 1.969 | 0.099 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 1.884 | 0.119 | 
|  | Mean | Stdev | 
| 3_H61-34_O4-3 | 2.047 | 0.460 | 
|  | Mean | Stdev | 
| 3_N1-34_H3-3 | 2.017 | 0.421 | 
|  | Mean | Stdev | 
| 4_H1-33_N3-4 | 1.971 | 0.094 | 
|  | Mean | Stdev | 
| 4_H21-33_O2-4 | 1.913 | 0.133 | 
|  | Mean | Stdev | 
| 4_O6-33_H41-4 | 1.979 | 0.163 | 
|  | Mean | Stdev | 
| 5_H61-32_O4-5 | 1.977 | 0.173 | 
|  | Mean | Stdev | 
| 5_N1-32_H3-5 | 1.980 | 0.123 | 
|  | Mean | Stdev | 
| 6_H61-31_O4-6 | 1.989 | 0.177 | 
|  | Mean | Stdev | 
| 6_N1-31_H3-6 | 1.966 | 0.116 | 
|  | Mean | Stdev | 
| 7_H41-30_O6-7 | 1.994 | 0.188 | 
|  | Mean | Stdev | 
| 7_N3-30_H1-7 | 1.973 | 0.100 | 
|  | Mean | Stdev | 
| 7_O2-30_H21-7 | 1.880 | 0.118 | 
|  | Mean | Stdev | 
| 8_H61-29_O4-8 | 2.018 | 0.195 | 
|  | Mean | Stdev | 
| 8_N1-29_H3-8 | 1.972 | 0.116 | 
|  | Mean | Stdev | 
| 9_H3-28_N1-9 | 2.003 | 0.133 | 
|  | Mean | Stdev | 
| 9_O4-28_H61-9 | 1.993 | 0.182 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | H41-O6_1-36 | 2.4423 | 1.6510 | 
| 1 | N3-H1_1-36 | 2.4084 | 1.5439 | 
| 1 | O2-H21_1-36 | 2.3767 | 1.5680 | 
| 2 | H41-O6_2-35 | 1.9683 | 0.1891 | 
| 2 | N3-H1_2-35 | 1.9693 | 0.0993 | 
| 2 | O2-H21_2-35 | 1.8838 | 0.1191 | 
| 3 | N1-H3_3-34 | 2.0172 | 0.4213 | 
| 3 | H61-O4_3-34 | 2.0469 | 0.4595 | 
| 4 | O6-H41_4-33 | 1.9786 | 0.1630 | 
| 4 | H1-N3_4-33 | 1.9708 | 0.0939 | 
| 4 | H21-O2_4-33 | 1.9126 | 0.1332 | 
| 5 | N1-H3_5-32 | 1.9799 | 0.1235 | 
| 5 | H61-O4_5-32 | 1.9772 | 0.1726 | 
| 6 | N1-H3_6-31 | 1.9659 | 0.1161 | 
| 6 | H61-O4_6-31 | 1.9891 | 0.1768 | 
| 7 | H41-O6_7-30 | 1.9941 | 0.1876 | 
| 7 | N3-H1_7-30 | 1.9727 | 0.1004 | 
| 7 | O2-H21_7-30 | 1.8801 | 0.1183 | 
| 8 | N1-H3_8-29 | 1.9721 | 0.1155 | 
| 8 | H61-O4_8-29 | 2.0180 | 0.1948 | 
| 9 | H3-N1_9-28 | 2.0027 | 0.1327 | 
| 9 | O4-H61_9-28 | 1.9930 | 0.1816 | 
| 10 | H41-O6_10-27 | 1.9692 | 0.1596 | 
| 10 | N3-H1_10-27 | 1.9707 | 0.0935 | 
| 10 | O2-H21_10-27 | 1.8879 | 0.1200 | 
| 11 | N1-H3_11-26 | 1.9720 | 0.1196 | 
| 11 | H61-O4_11-26 | 1.9885 | 0.1787 | 
| 12 | N1-H3_12-25 | 1.9641 | 0.1212 | 
| 12 | H61-O4_12-25 | 2.0005 | 0.1911 | 
| 13 | O6-H41_13-24 | 1.9807 | 0.1689 | 
| 13 | H1-N3_13-24 | 1.9632 | 0.0937 | 
| 13 | H21-O2_13-24 | 1.9099 | 0.1338 | 
| 14 | N1-H3_14-23 | 1.9857 | 0.1240 | 
| 14 | H61-O4_14-23 | 1.9780 | 0.1748 | 
| 15 | N1-H3_15-22 | 1.9728 | 0.1197 | 
| 15 | H61-O4_15-22 | 1.9816 | 0.1753 | 
| 16 | H41-O6_16-21 | 1.9965 | 0.1791 | 
| 16 | N3-H1_16-21 | 1.9806 | 0.0988 | 
| 16 | O2-H21_16-21 | 1.8870 | 0.1207 | 
| 17 | N1-H3_17-20 | 1.9517 | 0.1219 | 
| 17 | H61-O4_17-20 | 2.0409 | 0.2241 | 
| 18 | O6-H41_18-19 | 2.4978 | 1.6120 | 
| 18 | H1-N3_18-19 | 2.4211 | 1.5273 | 
| 18 | H21-O2_18-19 | 2.3803 | 1.5418 |