Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 
| 5' | G | - | C | - | T | - | T | - | A | - | A | - | A | - | A | - | T | - | A | - | A | - | C | - | A | - | A | - | T | - | A | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | A | - | A | - | T | - | T | - | T | - | T | - | A | - | T | - | T | - | G | - | T | - | T | - | A | - | T | - | G | 5' | 
|  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 18 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-34_N3-1 | 2.149 | 0.615 | 
|  | Mean | Stdev | 
| 1_H21-34_O2-1 | 2.049 | 0.741 | 
|  | Mean | Stdev | 
| 1_O6-34_H41-1 | 2.376 | 1.394 | 
|  | Mean | Stdev | 
| 10_H61-25_O4-10 | 2.028 | 0.207 | 
|  | Mean | Stdev | 
| 10_N1-25_H3-10 | 1.955 | 0.117 | 
|  | Mean | Stdev | 
| 11_H61-24_O4-11 | 1.983 | 0.169 | 
|  | Mean | Stdev | 
| 11_N1-24_H3-11 | 1.984 | 0.124 | 
|  | Mean | Stdev | 
| 12_H41-23_O6-12 | 1.994 | 0.174 | 
|  | Mean | Stdev | 
| 12_N3-23_H1-12 | 1.984 | 0.102 | 
|  | Mean | Stdev | 
| 12_O2-23_H21-12 | 1.881 | 0.120 | 
|  | Mean | Stdev | 
| 13_H61-22_O4-13 | 1.991 | 0.179 | 
|  | Mean | Stdev | 
| 13_N1-22_H3-13 | 1.966 | 0.116 | 
|  | Mean | Stdev | 
| 14_H61-21_O4-14 | 2.015 | 0.186 | 
|  | Mean | Stdev | 
| 14_N1-21_H3-14 | 1.988 | 0.124 | 
|  | Mean | Stdev | 
| 15_H3-20_N1-15 | 1.983 | 0.119 | 
|  | Mean | Stdev | 
| 15_O4-20_H61-15 | 2.005 | 0.196 | 
|  | Mean | Stdev | 
| 16_H61-19_O4-16 | 2.034 | 0.215 | 
|  | Mean | Stdev | 
| 16_N1-19_H3-16 | 1.974 | 0.121 | 
|  | Mean | Stdev | 
| 17_H41-18_O6-17 | 2.043 | 0.304 | 
|  | Mean | Stdev | 
| 17_N3-18_H1-17 | 2.030 | 0.158 | 
|  | Mean | Stdev | 
| 17_O2-18_H21-17 | 1.915 | 0.146 | 
|  | Mean | Stdev | 
| 2_H41-33_O6-2 | 1.966 | 0.159 | 
|  | Mean | Stdev | 
| 2_N3-33_H1-2 | 1.962 | 0.093 | 
|  | Mean | Stdev | 
| 2_O2-33_H21-2 | 1.896 | 0.126 | 
|  | Mean | Stdev | 
| 3_H3-32_N1-3 | 1.958 | 0.113 | 
|  | Mean | Stdev | 
| 3_O4-32_H61-3 | 2.010 | 0.188 | 
|  | Mean | Stdev | 
| 4_H3-31_N1-4 | 1.969 | 0.136 | 
|  | Mean | Stdev | 
| 4_O4-31_H61-4 | 2.042 | 0.263 | 
|  | Mean | Stdev | 
| 5_H61-30_O4-5 | 2.017 | 0.195 | 
|  | Mean | Stdev | 
| 5_N1-30_H3-5 | 1.967 | 0.122 | 
|  | Mean | Stdev | 
| 6_H61-29_O4-6 | 1.999 | 0.183 | 
|  | Mean | Stdev | 
| 6_N1-29_H3-6 | 1.978 | 0.121 | 
|  | Mean | Stdev | 
| 7_H61-28_O4-7 | 1.981 | 0.168 | 
|  | Mean | Stdev | 
| 7_N1-28_H3-7 | 1.967 | 0.116 | 
|  | Mean | Stdev | 
| 8_H61-27_O4-8 | 2.013 | 0.181 | 
|  | Mean | Stdev | 
| 8_N1-27_H3-8 | 1.975 | 0.119 | 
|  | Mean | Stdev | 
| 9_H3-26_N1-9 | 1.993 | 0.124 | 
|  | Mean | Stdev | 
| 9_O4-26_H61-9 | 2.014 | 0.211 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-34 | 2.3760 | 1.3937 | 
| 1 | H1-N3_1-34 | 2.1493 | 0.6151 | 
| 1 | H21-O2_1-34 | 2.0490 | 0.7412 | 
| 2 | H41-O6_2-33 | 1.9660 | 0.1588 | 
| 2 | N3-H1_2-33 | 1.9616 | 0.0931 | 
| 2 | O2-H21_2-33 | 1.8958 | 0.1257 | 
| 3 | H3-N1_3-32 | 1.9578 | 0.1126 | 
| 3 | O4-H61_3-32 | 2.0097 | 0.1882 | 
| 4 | H3-N1_4-31 | 1.9691 | 0.1361 | 
| 4 | O4-H61_4-31 | 2.0419 | 0.2631 | 
| 5 | N1-H3_5-30 | 1.9670 | 0.1224 | 
| 5 | H61-O4_5-30 | 2.0172 | 0.1951 | 
| 6 | N1-H3_6-29 | 1.9777 | 0.1208 | 
| 6 | H61-O4_6-29 | 1.9992 | 0.1831 | 
| 7 | N1-H3_7-28 | 1.9673 | 0.1156 | 
| 7 | H61-O4_7-28 | 1.9812 | 0.1676 | 
| 8 | N1-H3_8-27 | 1.9751 | 0.1186 | 
| 8 | H61-O4_8-27 | 2.0129 | 0.1812 | 
| 9 | H3-N1_9-26 | 1.9927 | 0.1238 | 
| 9 | O4-H61_9-26 | 2.0136 | 0.2113 | 
| 10 | N1-H3_10-25 | 1.9553 | 0.1170 | 
| 10 | H61-O4_10-25 | 2.0279 | 0.2073 | 
| 11 | N1-H3_11-24 | 1.9843 | 0.1244 | 
| 11 | H61-O4_11-24 | 1.9826 | 0.1693 | 
| 12 | H41-O6_12-23 | 1.9937 | 0.1743 | 
| 12 | N3-H1_12-23 | 1.9844 | 0.1025 | 
| 12 | O2-H21_12-23 | 1.8814 | 0.1199 | 
| 13 | N1-H3_13-22 | 1.9655 | 0.1161 | 
| 13 | H61-O4_13-22 | 1.9910 | 0.1787 | 
| 14 | N1-H3_14-21 | 1.9880 | 0.1237 | 
| 14 | H61-O4_14-21 | 2.0146 | 0.1859 | 
| 15 | H3-N1_15-20 | 1.9827 | 0.1192 | 
| 15 | O4-H61_15-20 | 2.0050 | 0.1962 | 
| 16 | N1-H3_16-19 | 1.9735 | 0.1212 | 
| 16 | H61-O4_16-19 | 2.0343 | 0.2149 | 
| 17 | H41-O6_17-18 | 2.0426 | 0.3040 | 
| 17 | N3-H1_17-18 | 2.0304 | 0.1576 | 
| 17 | O2-H21_17-18 | 1.9149 | 0.1463 |