Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 19 |  | 
| 5' | C | - | G | - | T | - | T | - | A | - | T | - | T | - | G | - | G | - | C | - | A | - | G | - | G | - | A | - | A | - | G | - | C | - | A | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | G | - | C | - | A | - | A | - | T | - | A | - | A | - | C | - | C | - | G | - | T | - | C | - | C | - | T | - | T | - | C | - | G | - | T | - | G | 5' | 
|  | 38 |  | 37 |  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H41-38_O6-1 | 2.344 | 1.348 | 
|  | Mean | Stdev | 
| 1_N3-38_H1-1 | 2.209 | 1.004 | 
|  | Mean | Stdev | 
| 1_O2-38_H21-1 | 2.112 | 0.854 | 
|  | Mean | Stdev | 
| 10_H41-29_O6-10 | 1.954 | 0.151 | 
|  | Mean | Stdev | 
| 10_N3-29_H1-10 | 1.967 | 0.090 | 
|  | Mean | Stdev | 
| 10_O2-29_H21-10 | 1.893 | 0.122 | 
|  | Mean | Stdev | 
| 11_H61-28_O4-11 | 2.006 | 0.198 | 
|  | Mean | Stdev | 
| 11_N1-28_H3-11 | 1.963 | 0.116 | 
|  | Mean | Stdev | 
| 12_H1-27_N3-12 | 1.968 | 0.092 | 
|  | Mean | Stdev | 
| 12_H21-27_O2-12 | 1.898 | 0.129 | 
|  | Mean | Stdev | 
| 12_O6-27_H41-12 | 1.980 | 0.166 | 
|  | Mean | Stdev | 
| 13_H1-26_N3-13 | 1.970 | 0.099 | 
|  | Mean | Stdev | 
| 13_H21-26_O2-13 | 1.914 | 0.136 | 
|  | Mean | Stdev | 
| 13_O6-26_H41-13 | 1.959 | 0.170 | 
|  | Mean | Stdev | 
| 14_H61-25_O4-14 | 2.006 | 0.198 | 
|  | Mean | Stdev | 
| 14_N1-25_H3-14 | 1.974 | 0.118 | 
|  | Mean | Stdev | 
| 15_H61-24_O4-15 | 2.022 | 0.197 | 
|  | Mean | Stdev | 
| 15_N1-24_H3-15 | 1.944 | 0.108 | 
|  | Mean | Stdev | 
| 16_H1-23_N3-16 | 1.966 | 0.094 | 
|  | Mean | Stdev | 
| 16_H21-23_O2-16 | 1.900 | 0.127 | 
|  | Mean | Stdev | 
| 16_O6-23_H41-16 | 1.968 | 0.160 | 
|  | Mean | Stdev | 
| 17_H41-22_O6-17 | 1.972 | 0.172 | 
|  | Mean | Stdev | 
| 17_N3-22_H1-17 | 1.966 | 0.097 | 
|  | Mean | Stdev | 
| 17_O2-22_H21-17 | 1.887 | 0.118 | 
|  | Mean | Stdev | 
| 18_H61-21_O4-18 | 1.987 | 0.190 | 
|  | Mean | Stdev | 
| 18_N1-21_H3-18 | 1.975 | 0.122 | 
|  | Mean | Stdev | 
| 19_H41-20_O6-19 | 2.046 | 0.331 | 
|  | Mean | Stdev | 
| 19_N3-20_H1-19 | 2.035 | 0.190 | 
|  | Mean | Stdev | 
| 19_O2-20_H21-19 | 1.916 | 0.179 | 
|  | Mean | Stdev | 
| 2_H1-37_N3-2 | 1.974 | 0.099 | 
|  | Mean | Stdev | 
| 2_H21-37_O2-2 | 1.881 | 0.121 | 
|  | Mean | Stdev | 
| 2_O6-37_H41-2 | 1.971 | 0.157 | 
|  | Mean | Stdev | 
| 3_H3-36_N1-3 | 1.975 | 0.118 | 
|  | Mean | Stdev | 
| 3_O4-36_H61-3 | 1.991 | 0.175 | 
|  | Mean | Stdev | 
| 4_H3-35_N1-4 | 1.951 | 0.107 | 
|  | Mean | Stdev | 
| 4_O4-35_H61-4 | 2.023 | 0.195 | 
|  | Mean | Stdev | 
| 5_H61-34_O4-5 | 2.122 | 0.658 | 
|  | Mean | Stdev | 
| 5_N1-34_H3-5 | 2.094 | 0.523 | 
|  | Mean | Stdev | 
| 6_H3-33_N1-6 | 1.995 | 0.125 | 
|  | Mean | Stdev | 
| 6_O4-33_H61-6 | 1.994 | 0.175 | 
|  | Mean | Stdev | 
| 7_H3-32_N1-7 | 1.962 | 0.116 | 
|  | Mean | Stdev | 
| 7_O4-32_H61-7 | 1.989 | 0.180 | 
|  | Mean | Stdev | 
| 8_H1-31_N3-8 | 1.964 | 0.091 | 
|  | Mean | Stdev | 
| 8_H21-31_O2-8 | 1.878 | 0.118 | 
|  | Mean | Stdev | 
| 8_O6-31_H41-8 | 1.970 | 0.161 | 
|  | Mean | Stdev | 
| 9_H1-30_N3-9 | 1.970 | 0.091 | 
|  | Mean | Stdev | 
| 9_H21-30_O2-9 | 1.923 | 0.135 | 
|  | Mean | Stdev | 
| 9_O6-30_H41-9 | 1.944 | 0.146 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | H41-O6_1-38 | 2.3436 | 1.3483 | 
| 1 | N3-H1_1-38 | 2.2092 | 1.0039 | 
| 1 | O2-H21_1-38 | 2.1121 | 0.8540 | 
| 2 | O6-H41_2-37 | 1.9712 | 0.1570 | 
| 2 | H1-N3_2-37 | 1.9740 | 0.0989 | 
| 2 | H21-O2_2-37 | 1.8809 | 0.1211 | 
| 3 | H3-N1_3-36 | 1.9754 | 0.1185 | 
| 3 | O4-H61_3-36 | 1.9909 | 0.1754 | 
| 4 | H3-N1_4-35 | 1.9509 | 0.1068 | 
| 4 | O4-H61_4-35 | 2.0229 | 0.1954 | 
| 5 | N1-H3_5-34 | 2.0942 | 0.5235 | 
| 5 | H61-O4_5-34 | 2.1215 | 0.6585 | 
| 6 | H3-N1_6-33 | 1.9946 | 0.1250 | 
| 6 | O4-H61_6-33 | 1.9935 | 0.1748 | 
| 7 | H3-N1_7-32 | 1.9615 | 0.1157 | 
| 7 | O4-H61_7-32 | 1.9894 | 0.1805 | 
| 8 | O6-H41_8-31 | 1.9704 | 0.1612 | 
| 8 | H1-N3_8-31 | 1.9641 | 0.0911 | 
| 8 | H21-O2_8-31 | 1.8781 | 0.1179 | 
| 9 | O6-H41_9-30 | 1.9445 | 0.1457 | 
| 9 | H1-N3_9-30 | 1.9705 | 0.0911 | 
| 9 | H21-O2_9-30 | 1.9228 | 0.1352 | 
| 10 | H41-O6_10-29 | 1.9542 | 0.1511 | 
| 10 | N3-H1_10-29 | 1.9668 | 0.0898 | 
| 10 | O2-H21_10-29 | 1.8930 | 0.1219 | 
| 11 | N1-H3_11-28 | 1.9629 | 0.1155 | 
| 11 | H61-O4_11-28 | 2.0065 | 0.1979 | 
| 12 | O6-H41_12-27 | 1.9796 | 0.1660 | 
| 12 | H1-N3_12-27 | 1.9685 | 0.0923 | 
| 12 | H21-O2_12-27 | 1.8983 | 0.1292 | 
| 13 | O6-H41_13-26 | 1.9592 | 0.1695 | 
| 13 | H1-N3_13-26 | 1.9705 | 0.0990 | 
| 13 | H21-O2_13-26 | 1.9143 | 0.1355 | 
| 14 | N1-H3_14-25 | 1.9736 | 0.1181 | 
| 14 | H61-O4_14-25 | 2.0056 | 0.1981 | 
| 15 | N1-H3_15-24 | 1.9445 | 0.1078 | 
| 15 | H61-O4_15-24 | 2.0217 | 0.1966 | 
| 16 | O6-H41_16-23 | 1.9682 | 0.1597 | 
| 16 | H1-N3_16-23 | 1.9656 | 0.0941 | 
| 16 | H21-O2_16-23 | 1.9001 | 0.1274 | 
| 17 | H41-O6_17-22 | 1.9719 | 0.1715 | 
| 17 | N3-H1_17-22 | 1.9656 | 0.0965 | 
| 17 | O2-H21_17-22 | 1.8873 | 0.1177 | 
| 18 | N1-H3_18-21 | 1.9749 | 0.1222 | 
| 18 | H61-O4_18-21 | 1.9871 | 0.1903 | 
| 19 | H41-O6_19-20 | 2.0456 | 0.3310 | 
| 19 | N3-H1_19-20 | 2.0350 | 0.1903 | 
| 19 | O2-H21_19-20 | 1.9164 | 0.1789 |