Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 19 |  | 20 |  | 
| 5' | A | - | A | - | G | - | T | - | A | - | C | - | A | - | A | - | A | - | C | - | T | - | T | - | T | - | C | - | T | - | T | - | G | - | T | - | A | - | T | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | T | - | T | - | C | - | A | - | T | - | G | - | T | - | T | - | T | - | G | - | A | - | A | - | A | - | G | - | A | - | A | - | C | - | A | - | T | - | A | 5' | 
|  | 40 |  | 39 |  | 38 |  | 37 |  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H61-40_O4-1 | 3.455 | 2.990 | 
|  | Mean | Stdev | 
| 1_N1-40_H3-1 | 3.399 | 2.939 | 
|  | Mean | Stdev | 
| 10_H41-31_O6-10 | 1.992 | 0.177 | 
|  | Mean | Stdev | 
| 10_N3-31_H1-10 | 1.961 | 0.096 | 
|  | Mean | Stdev | 
| 10_O2-31_H21-10 | 1.874 | 0.115 | 
|  | Mean | Stdev | 
| 11_H3-30_N1-11 | 1.941 | 0.106 | 
|  | Mean | Stdev | 
| 11_O4-30_H61-11 | 2.041 | 0.215 | 
|  | Mean | Stdev | 
| 12_H3-29_N1-12 | 1.968 | 0.122 | 
|  | Mean | Stdev | 
| 12_O4-29_H61-12 | 2.017 | 0.205 | 
|  | Mean | Stdev | 
| 13_H3-28_N1-13 | 1.981 | 0.124 | 
|  | Mean | Stdev | 
| 13_O4-28_H61-13 | 2.017 | 0.203 | 
|  | Mean | Stdev | 
| 14_H41-27_O6-14 | 1.988 | 0.183 | 
|  | Mean | Stdev | 
| 14_N3-27_H1-14 | 1.970 | 0.100 | 
|  | Mean | Stdev | 
| 14_O2-27_H21-14 | 1.898 | 0.130 | 
|  | Mean | Stdev | 
| 15_H3-26_N1-15 | 1.960 | 0.127 | 
|  | Mean | Stdev | 
| 15_O4-26_H61-15 | 2.020 | 0.225 | 
|  | Mean | Stdev | 
| 16_H3-25_N1-16 | 1.967 | 0.116 | 
|  | Mean | Stdev | 
| 16_O4-25_H61-16 | 2.005 | 0.199 | 
|  | Mean | Stdev | 
| 17_H1-24_N3-17 | 1.991 | 0.109 | 
|  | Mean | Stdev | 
| 17_H21-24_O2-17 | 1.887 | 0.121 | 
|  | Mean | Stdev | 
| 17_O6-24_H41-17 | 1.992 | 0.188 | 
|  | Mean | Stdev | 
| 18_H3-23_N1-18 | 2.011 | 0.141 | 
|  | Mean | Stdev | 
| 18_O4-23_H61-18 | 1.942 | 0.159 | 
|  | Mean | Stdev | 
| 19_H61-22_O4-19 | 2.145 | 0.601 | 
|  | Mean | Stdev | 
| 19_N1-22_H3-19 | 2.029 | 0.591 | 
|  | Mean | Stdev | 
| 2_H61-39_O4-2 | 2.380 | 1.694 | 
|  | Mean | Stdev | 
| 2_N1-39_H3-2 | 2.235 | 1.479 | 
|  | Mean | Stdev | 
| 20_H3-21_N1-20 | 4.712 | 1.410 | 
|  | Mean | Stdev | 
| 20_O4-21_H61-20 | 3.860 | 1.483 | 
|  | Mean | Stdev | 
| 3_H1-38_N3-3 | 1.969 | 0.100 | 
|  | Mean | Stdev | 
| 3_H21-38_O2-3 | 1.897 | 0.127 | 
|  | Mean | Stdev | 
| 3_O6-38_H41-3 | 1.999 | 0.184 | 
|  | Mean | Stdev | 
| 4_H3-37_N1-4 | 1.982 | 0.168 | 
|  | Mean | Stdev | 
| 4_O4-37_H61-4 | 2.003 | 0.258 | 
|  | Mean | Stdev | 
| 5_H61-36_O4-5 | 1.982 | 0.183 | 
|  | Mean | Stdev | 
| 5_N1-36_H3-5 | 1.986 | 0.126 | 
|  | Mean | Stdev | 
| 6_H41-35_O6-6 | 2.001 | 0.184 | 
|  | Mean | Stdev | 
| 6_N3-35_H1-6 | 1.997 | 0.111 | 
|  | Mean | Stdev | 
| 6_O2-35_H21-6 | 1.891 | 0.121 | 
|  | Mean | Stdev | 
| 7_H61-34_O4-7 | 2.009 | 0.302 | 
|  | Mean | Stdev | 
| 7_N1-34_H3-7 | 1.975 | 0.212 | 
|  | Mean | Stdev | 
| 8_H61-33_O4-8 | 1.990 | 0.176 | 
|  | Mean | Stdev | 
| 8_N1-33_H3-8 | 1.970 | 0.119 | 
|  | Mean | Stdev | 
| 9_H61-32_O4-9 | 2.007 | 0.191 | 
|  | Mean | Stdev | 
| 9_N1-32_H3-9 | 1.955 | 0.112 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | N1-H3_1-40 | 3.3992 | 2.9394 | 
| 1 | H61-O4_1-40 | 3.4546 | 2.9897 | 
| 2 | N1-H3_2-39 | 2.2350 | 1.4790 | 
| 2 | H61-O4_2-39 | 2.3795 | 1.6942 | 
| 3 | O6-H41_3-38 | 1.9987 | 0.1837 | 
| 3 | H1-N3_3-38 | 1.9693 | 0.0995 | 
| 3 | H21-O2_3-38 | 1.8968 | 0.1265 | 
| 4 | H3-N1_4-37 | 1.9818 | 0.1678 | 
| 4 | O4-H61_4-37 | 2.0029 | 0.2583 | 
| 5 | N1-H3_5-36 | 1.9863 | 0.1256 | 
| 5 | H61-O4_5-36 | 1.9820 | 0.1834 | 
| 6 | H41-O6_6-35 | 2.0012 | 0.1837 | 
| 6 | N3-H1_6-35 | 1.9966 | 0.1106 | 
| 6 | O2-H21_6-35 | 1.8915 | 0.1213 | 
| 7 | N1-H3_7-34 | 1.9748 | 0.2116 | 
| 7 | H61-O4_7-34 | 2.0094 | 0.3018 | 
| 8 | N1-H3_8-33 | 1.9696 | 0.1187 | 
| 8 | H61-O4_8-33 | 1.9905 | 0.1756 | 
| 9 | N1-H3_9-32 | 1.9552 | 0.1120 | 
| 9 | H61-O4_9-32 | 2.0067 | 0.1906 | 
| 10 | H41-O6_10-31 | 1.9920 | 0.1775 | 
| 10 | N3-H1_10-31 | 1.9613 | 0.0964 | 
| 10 | O2-H21_10-31 | 1.8736 | 0.1150 | 
| 11 | H3-N1_11-30 | 1.9412 | 0.1065 | 
| 11 | O4-H61_11-30 | 2.0409 | 0.2146 | 
| 12 | H3-N1_12-29 | 1.9685 | 0.1223 | 
| 12 | O4-H61_12-29 | 2.0168 | 0.2055 | 
| 13 | H3-N1_13-28 | 1.9808 | 0.1245 | 
| 13 | O4-H61_13-28 | 2.0172 | 0.2031 | 
| 14 | H41-O6_14-27 | 1.9876 | 0.1835 | 
| 14 | N3-H1_14-27 | 1.9695 | 0.0997 | 
| 14 | O2-H21_14-27 | 1.8984 | 0.1297 | 
| 15 | H3-N1_15-26 | 1.9595 | 0.1271 | 
| 15 | O4-H61_15-26 | 2.0196 | 0.2251 | 
| 16 | H3-N1_16-25 | 1.9667 | 0.1160 | 
| 16 | O4-H61_16-25 | 2.0052 | 0.1992 | 
| 17 | O6-H41_17-24 | 1.9920 | 0.1877 | 
| 17 | H1-N3_17-24 | 1.9909 | 0.1086 | 
| 17 | H21-O2_17-24 | 1.8874 | 0.1215 | 
| 18 | H3-N1_18-23 | 2.0114 | 0.1406 | 
| 18 | O4-H61_18-23 | 1.9425 | 0.1590 | 
| 19 | N1-H3_19-22 | 2.0288 | 0.5908 | 
| 19 | H61-O4_19-22 | 2.1454 | 0.6007 | 
| 20 | H3-N1_20-21 | 4.7122 | 1.4099 | 
| 20 | O4-H61_20-21 | 3.8604 | 1.4828 |