Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 
| 5' | C | - | C | - | A | - | G | - | G | - | A | - | C | - | A | - | A | - | T | - | A | - | G | - | A | - | G | - | A | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | G | - | G | - | T | - | C | - | C | - | T | - | G | - | T | - | T | - | A | - | T | - | C | - | T | - | C | - | T | - | G | 5' | 
|  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 18 |  | 17 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H41-32_O6-1 | 2.515 | 2.845 | 
|  | Mean | Stdev | 
| 1_N3-32_H1-1 | 2.394 | 2.231 | 
|  | Mean | Stdev | 
| 1_O2-32_H21-1 | 2.297 | 1.841 | 
|  | Mean | Stdev | 
| 10_H3-23_N1-10 | 1.986 | 0.122 | 
|  | Mean | Stdev | 
| 10_O4-23_H61-10 | 2.031 | 0.209 | 
|  | Mean | Stdev | 
| 11_H61-22_O4-11 | 2.041 | 0.221 | 
|  | Mean | Stdev | 
| 11_N1-22_H3-11 | 1.962 | 0.123 | 
|  | Mean | Stdev | 
| 12_H1-21_N3-12 | 1.969 | 0.095 | 
|  | Mean | Stdev | 
| 12_H21-21_O2-12 | 1.909 | 0.133 | 
|  | Mean | Stdev | 
| 12_O6-21_H41-12 | 1.982 | 0.170 | 
|  | Mean | Stdev | 
| 13_H61-20_O4-13 | 1.995 | 0.198 | 
|  | Mean | Stdev | 
| 13_N1-20_H3-13 | 1.978 | 0.130 | 
|  | Mean | Stdev | 
| 14_H1-19_N3-14 | 1.959 | 0.094 | 
|  | Mean | Stdev | 
| 14_H21-19_O2-14 | 1.907 | 0.129 | 
|  | Mean | Stdev | 
| 14_O6-19_H41-14 | 1.971 | 0.165 | 
|  | Mean | Stdev | 
| 15_H61-18_O4-15 | 1.996 | 0.194 | 
|  | Mean | Stdev | 
| 15_N1-18_H3-15 | 1.990 | 0.135 | 
|  | Mean | Stdev | 
| 16_H41-17_O6-16 | 2.035 | 0.276 | 
|  | Mean | Stdev | 
| 16_N3-17_H1-16 | 2.022 | 0.146 | 
|  | Mean | Stdev | 
| 16_O2-17_H21-16 | 1.915 | 0.145 | 
|  | Mean | Stdev | 
| 2_H41-31_O6-2 | 1.970 | 0.173 | 
|  | Mean | Stdev | 
| 2_N3-31_H1-2 | 1.967 | 0.097 | 
|  | Mean | Stdev | 
| 2_O2-31_H21-2 | 1.883 | 0.119 | 
|  | Mean | Stdev | 
| 3_H61-30_O4-3 | 1.992 | 0.178 | 
|  | Mean | Stdev | 
| 3_N1-30_H3-3 | 1.964 | 0.117 | 
|  | Mean | Stdev | 
| 4_H1-29_N3-4 | 1.967 | 0.093 | 
|  | Mean | Stdev | 
| 4_H21-29_O2-4 | 1.907 | 0.132 | 
|  | Mean | Stdev | 
| 4_O6-29_H41-4 | 1.986 | 0.171 | 
|  | Mean | Stdev | 
| 5_H1-28_N3-5 | 1.964 | 0.092 | 
|  | Mean | Stdev | 
| 5_H21-28_O2-5 | 1.904 | 0.129 | 
|  | Mean | Stdev | 
| 5_O6-28_H41-5 | 1.958 | 0.153 | 
|  | Mean | Stdev | 
| 6_H61-27_O4-6 | 1.964 | 0.169 | 
|  | Mean | Stdev | 
| 6_N1-27_H3-6 | 1.990 | 0.132 | 
|  | Mean | Stdev | 
| 7_H41-26_O6-7 | 1.992 | 0.169 | 
|  | Mean | Stdev | 
| 7_N3-26_H1-7 | 1.981 | 0.101 | 
|  | Mean | Stdev | 
| 7_O2-26_H21-7 | 1.887 | 0.121 | 
|  | Mean | Stdev | 
| 8_H61-25_O4-8 | 2.010 | 0.258 | 
|  | Mean | Stdev | 
| 8_N1-25_H3-8 | 1.967 | 0.159 | 
|  | Mean | Stdev | 
| 9_H61-24_O4-9 | 2.007 | 0.178 | 
|  | Mean | Stdev | 
| 9_N1-24_H3-9 | 1.989 | 0.125 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | H41-O6_1-32 | 2.5149 | 2.8445 | 
| 1 | N3-H1_1-32 | 2.3936 | 2.2313 | 
| 1 | O2-H21_1-32 | 2.2975 | 1.8407 | 
| 2 | H41-O6_2-31 | 1.9705 | 0.1730 | 
| 2 | N3-H1_2-31 | 1.9666 | 0.0966 | 
| 2 | O2-H21_2-31 | 1.8830 | 0.1186 | 
| 3 | N1-H3_3-30 | 1.9635 | 0.1172 | 
| 3 | H61-O4_3-30 | 1.9916 | 0.1782 | 
| 4 | O6-H41_4-29 | 1.9856 | 0.1711 | 
| 4 | H1-N3_4-29 | 1.9672 | 0.0935 | 
| 4 | H21-O2_4-29 | 1.9065 | 0.1321 | 
| 5 | O6-H41_5-28 | 1.9579 | 0.1532 | 
| 5 | H1-N3_5-28 | 1.9635 | 0.0921 | 
| 5 | H21-O2_5-28 | 1.9039 | 0.1291 | 
| 6 | N1-H3_6-27 | 1.9904 | 0.1315 | 
| 6 | H61-O4_6-27 | 1.9635 | 0.1688 | 
| 7 | H41-O6_7-26 | 1.9915 | 0.1692 | 
| 7 | N3-H1_7-26 | 1.9814 | 0.1010 | 
| 7 | O2-H21_7-26 | 1.8874 | 0.1207 | 
| 8 | N1-H3_8-25 | 1.9674 | 0.1585 | 
| 8 | H61-O4_8-25 | 2.0095 | 0.2576 | 
| 9 | N1-H3_9-24 | 1.9891 | 0.1247 | 
| 9 | H61-O4_9-24 | 2.0075 | 0.1782 | 
| 10 | H3-N1_10-23 | 1.9865 | 0.1224 | 
| 10 | O4-H61_10-23 | 2.0311 | 0.2094 | 
| 11 | N1-H3_11-22 | 1.9625 | 0.1233 | 
| 11 | H61-O4_11-22 | 2.0405 | 0.2212 | 
| 12 | O6-H41_12-21 | 1.9823 | 0.1696 | 
| 12 | H1-N3_12-21 | 1.9692 | 0.0954 | 
| 12 | H21-O2_12-21 | 1.9093 | 0.1328 | 
| 13 | N1-H3_13-20 | 1.9783 | 0.1298 | 
| 13 | H61-O4_13-20 | 1.9948 | 0.1981 | 
| 14 | O6-H41_14-19 | 1.9711 | 0.1645 | 
| 14 | H1-N3_14-19 | 1.9589 | 0.0941 | 
| 14 | H21-O2_14-19 | 1.9070 | 0.1289 | 
| 15 | N1-H3_15-18 | 1.9900 | 0.1349 | 
| 15 | H61-O4_15-18 | 1.9959 | 0.1941 | 
| 16 | H41-O6_16-17 | 2.0346 | 0.2759 | 
| 16 | N3-H1_16-17 | 2.0224 | 0.1458 | 
| 16 | O2-H21_16-17 | 1.9155 | 0.1454 |