Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 
| 5' | A | - | G | - | T | - | A | - | T | - | A | - | A | - | T | - | T | - | A | - | T | - | T | - | A | - | T | - | A | - | C | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | T | - | C | - | A | - | T | - | A | - | T | - | T | - | A | - | A | - | T | - | A | - | A | - | T | - | A | - | T | - | G | - | G | 5' | 
|  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 18 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H61-34_O4-1 | 3.602 | 2.835 | 
|  | Mean | Stdev | 
| 1_N1-34_H3-1 | 3.447 | 2.494 | 
|  | Mean | Stdev | 
| 10_H61-25_O4-10 | 2.027 | 0.217 | 
|  | Mean | Stdev | 
| 10_N1-25_H3-10 | 1.993 | 0.127 | 
|  | Mean | Stdev | 
| 11_H3-24_N1-11 | 1.981 | 0.118 | 
|  | Mean | Stdev | 
| 11_O4-24_H61-11 | 2.016 | 0.186 | 
|  | Mean | Stdev | 
| 12_H3-23_N1-12 | 1.961 | 0.121 | 
|  | Mean | Stdev | 
| 12_O4-23_H61-12 | 2.028 | 0.228 | 
|  | Mean | Stdev | 
| 13_H61-22_O4-13 | 2.042 | 0.284 | 
|  | Mean | Stdev | 
| 13_N1-22_H3-13 | 2.001 | 0.218 | 
|  | Mean | Stdev | 
| 14_H3-21_N1-14 | 1.996 | 0.128 | 
|  | Mean | Stdev | 
| 14_O4-21_H61-14 | 2.014 | 0.197 | 
|  | Mean | Stdev | 
| 15_H61-20_O4-15 | 2.011 | 0.197 | 
|  | Mean | Stdev | 
| 15_N1-20_H3-15 | 1.965 | 0.114 | 
|  | Mean | Stdev | 
| 16_H41-19_O6-16 | 1.988 | 0.170 | 
|  | Mean | Stdev | 
| 16_N3-19_H1-16 | 1.966 | 0.096 | 
|  | Mean | Stdev | 
| 16_O2-19_H21-16 | 1.901 | 0.129 | 
|  | Mean | Stdev | 
| 17_H41-18_O6-17 | 2.044 | 0.335 | 
|  | Mean | Stdev | 
| 17_N3-18_H1-17 | 2.010 | 0.177 | 
|  | Mean | Stdev | 
| 17_O2-18_H21-17 | 1.907 | 0.175 | 
|  | Mean | Stdev | 
| 2_H1-33_N3-2 | 1.970 | 0.101 | 
|  | Mean | Stdev | 
| 2_H21-33_O2-2 | 1.897 | 0.129 | 
|  | Mean | Stdev | 
| 2_O6-33_H41-2 | 1.991 | 0.177 | 
|  | Mean | Stdev | 
| 3_H3-32_N1-3 | 1.978 | 0.122 | 
|  | Mean | Stdev | 
| 3_O4-32_H61-3 | 1.998 | 0.190 | 
|  | Mean | Stdev | 
| 4_H61-31_O4-4 | 2.026 | 0.201 | 
|  | Mean | Stdev | 
| 4_N1-31_H3-4 | 1.990 | 0.123 | 
|  | Mean | Stdev | 
| 5_H3-30_N1-5 | 1.993 | 0.128 | 
|  | Mean | Stdev | 
| 5_O4-30_H61-5 | 2.035 | 0.219 | 
|  | Mean | Stdev | 
| 6_H61-29_O4-6 | 2.017 | 0.202 | 
|  | Mean | Stdev | 
| 6_N1-29_H3-6 | 1.962 | 0.115 | 
|  | Mean | Stdev | 
| 7_H61-28_O4-7 | 2.026 | 0.191 | 
|  | Mean | Stdev | 
| 7_N1-28_H3-7 | 1.976 | 0.118 | 
|  | Mean | Stdev | 
| 8_H3-27_N1-8 | 1.978 | 0.118 | 
|  | Mean | Stdev | 
| 8_O4-27_H61-8 | 2.028 | 0.192 | 
|  | Mean | Stdev | 
| 9_H3-26_N1-9 | 1.953 | 0.109 | 
|  | Mean | Stdev | 
| 9_O4-26_H61-9 | 2.024 | 0.199 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | N1-H3_1-34 | 3.4475 | 2.4937 | 
| 1 | H61-O4_1-34 | 3.6023 | 2.8346 | 
| 2 | O6-H41_2-33 | 1.9908 | 0.1771 | 
| 2 | H1-N3_2-33 | 1.9700 | 0.1009 | 
| 2 | H21-O2_2-33 | 1.8966 | 0.1289 | 
| 3 | H3-N1_3-32 | 1.9777 | 0.1221 | 
| 3 | O4-H61_3-32 | 1.9977 | 0.1899 | 
| 4 | N1-H3_4-31 | 1.9901 | 0.1234 | 
| 4 | H61-O4_4-31 | 2.0258 | 0.2011 | 
| 5 | H3-N1_5-30 | 1.9929 | 0.1280 | 
| 5 | O4-H61_5-30 | 2.0353 | 0.2188 | 
| 6 | N1-H3_6-29 | 1.9616 | 0.1145 | 
| 6 | H61-O4_6-29 | 2.0168 | 0.2015 | 
| 7 | N1-H3_7-28 | 1.9763 | 0.1178 | 
| 7 | H61-O4_7-28 | 2.0265 | 0.1913 | 
| 8 | H3-N1_8-27 | 1.9782 | 0.1176 | 
| 8 | O4-H61_8-27 | 2.0282 | 0.1921 | 
| 9 | H3-N1_9-26 | 1.9530 | 0.1091 | 
| 9 | O4-H61_9-26 | 2.0240 | 0.1993 | 
| 10 | N1-H3_10-25 | 1.9931 | 0.1265 | 
| 10 | H61-O4_10-25 | 2.0268 | 0.2172 | 
| 11 | H3-N1_11-24 | 1.9813 | 0.1183 | 
| 11 | O4-H61_11-24 | 2.0162 | 0.1862 | 
| 12 | H3-N1_12-23 | 1.9613 | 0.1208 | 
| 12 | O4-H61_12-23 | 2.0277 | 0.2276 | 
| 13 | N1-H3_13-22 | 2.0007 | 0.2178 | 
| 13 | H61-O4_13-22 | 2.0418 | 0.2843 | 
| 14 | H3-N1_14-21 | 1.9958 | 0.1276 | 
| 14 | O4-H61_14-21 | 2.0139 | 0.1971 | 
| 15 | N1-H3_15-20 | 1.9646 | 0.1143 | 
| 15 | H61-O4_15-20 | 2.0112 | 0.1966 | 
| 16 | H41-O6_16-19 | 1.9884 | 0.1702 | 
| 16 | N3-H1_16-19 | 1.9655 | 0.0957 | 
| 16 | O2-H21_16-19 | 1.9007 | 0.1288 | 
| 17 | H41-O6_17-18 | 2.0440 | 0.3348 | 
| 17 | N3-H1_17-18 | 2.0103 | 0.1773 | 
| 17 | O2-H21_17-18 | 1.9066 | 0.1754 |