NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.611	0.000	0.000	0.017	0.000	0.000
Slide	0.000	0.729	0.183	0.000	-0.005	0.009
Rise	0.000	0.183	0.298	0.000	-0.002	0.009
Tilt	0.017	0.000	0.000	0.001	0.000	0.000
Roll	0.000	-0.005	-0.002	0.000	0.000	-0.000
Twist	0.000	0.009	0.009	0.000	-0.000	0.001

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.773	0.000	0.000	0.101	0.000	0.000
Slide	0.000	3.262	-1.134	0.000	-0.034	0.014
Rise	0.000	-1.130	1.672	0.000	0.022	-0.021
Tilt	0.101	0.000	0.000	0.004	0.000	0.000
Roll	0.000	-0.034	0.022	0.000	0.001	-0.000
Twist	0.000	0.014	-0.021	0.000	-0.000	0.001

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.418	0.000	0.000	0.087	0.000	0.000
Slide	0.000	2.698	-0.403	0.000	-0.021	0.009
Rise	0.000	-0.402	1.116	0.000	0.011	-0.014
Tilt	0.087	0.000	0.000	0.004	0.000	0.000
Roll	0.000	-0.021	0.011	0.000	0.000	-0.000
Twist	0.000	0.009	-0.014	0.000	-0.000	0.001

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.328	0.000	0.000	0.047	0.000	0.000
Slide	0.000	1.167	-0.334	0.000	-0.015	0.005
Rise	0.000	-0.333	0.645	0.000	0.003	-0.010
Tilt	0.047	0.000	0.000	0.002	0.000	0.000
Roll	0.000	-0.015	0.003	0.000	0.000	-0.000
Twist	0.000	0.005	-0.010	0.000	-0.000	0.001

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.138	0.000	0.000	-0.002	0.000	0.000
Slide	0.000	0.132	0.060	0.000	0.001	0.002
Rise	0.000	0.060	0.117	0.000	-0.001	-0.001
Tilt	-0.002	0.000	0.000	0.000	0.000	0.000
Roll	0.000	0.001	-0.001	0.000	0.000	-0.000
Twist	0.000	0.002	-0.001	0.000	-0.000	0.000

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.085	0.000	0.000	-0.027	0.000	0.000
Slide	0.000	0.753	0.059	0.000	0.043	0.003
Rise	0.000	0.059	0.338	0.000	-0.002	-0.002
Tilt	-0.027	0.000	0.000	0.001	0.000	0.000
Roll	0.000	0.043	-0.002	0.000	0.004	-0.000
Twist	0.000	0.003	-0.002	0.000	-0.000	0.000

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.029	0.000	0.000	0.000	0.000	0.000
Slide	0.000	0.420	0.212	0.000	0.027	-0.003
Rise	0.000	0.212	0.418	0.000	0.021	-0.005
Tilt	0.000	0.000	0.000	0.000	0.000	0.000
Roll	0.000	0.027	0.021	0.000	0.003	-0.000
Twist	0.000	-0.003	-0.005	0.000	-0.000	0.000

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.279	0.000	0.000	-0.045	0.000	0.000
Slide	0.000	3.750	2.304	0.000	0.113	0.119
Rise	0.000	2.287	2.061	0.000	-0.011	0.092
Tilt	-0.045	0.000	0.000	0.001	0.000	0.000
Roll	0.000	0.114	-0.009	0.000	0.016	-0.000
Twist	0.000	0.118	0.093	0.000	-0.000	0.006

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.214	0.000	0.000	-0.004	0.000	0.000
Slide	0.000	0.260	0.082	0.000	0.011	0.004
Rise	0.000	0.082	0.127	0.000	0.002	-0.000
Tilt	-0.004	0.000	0.000	0.000	0.000	0.000
Roll	0.000	0.011	0.002	0.000	0.001	0.000
Twist	0.000	0.004	-0.000	0.000	0.000	0.000

[Image courtesy of Curves+]

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	Mean	Stdev
-atat.3.cte	0.000	0.000

	Mean	Stdev
-atat.5.cte	0.000	0.000

	Mean	Stdev
-atat.7.cte	0.000	0.000

	Mean	Stdev
-atat.9.cte	0.000	0.000

	Mean	Stdev
-tata.10.cte	0.000	0.000

	Mean	Stdev
-tata.2.cte	0.000	0.000

	Mean	Stdev
-tata.4.cte	0.000	0.000

	Mean	Stdev
-tata.6.cte	0.000	0.000

	Mean	Stdev
-tata.8.cte	0.000	0.000

	Mean	Stdev
rise-10-TATA	2.944	2.958

	Mean	Stdev
roll-10-TATA	29.590	42.572

	Mean	Stdev
shift-10-TATA	0.000	2.399

	Mean	Stdev
slide-10-TATA	-0.720	2.926

	Mean	Stdev
tilt-10-TATA	16.270	56.959

	Mean	Stdev
twist-10-TATA	34.693	44.781

	Mean	Stdev
rise-2-TATA	2.718	1.603

	Mean	Stdev
roll-2-TATA	62.779	32.939

	Mean	Stdev
shift-2-TATA	0.000	1.388

	Mean	Stdev
slide-2-TATA	-2.978	2.272

	Mean	Stdev
tilt-2-TATA	7.855	33.103

	Mean	Stdev
twist-2-TATA	112.504	50.806

	Mean	Stdev
rise-3-ATAT	0.836	2.124

	Mean	Stdev
roll-3-ATAT	75.017	79.250

	Mean	Stdev
shift-3-ATAT	0.000	1.193

	Mean	Stdev
slide-3-ATAT	-1.717	1.541

	Mean	Stdev
tilt-3-ATAT	0.493	23.951

	Mean	Stdev
twist-3-ATAT	-13.801	32.770

	Mean	Stdev
rise-4-TATA	2.579	1.526

	Mean	Stdev
roll-4-TATA	67.601	23.097

	Mean	Stdev
shift-4-TATA	0.000	4.530

	Mean	Stdev
slide-4-TATA	-0.717	1.774

	Mean	Stdev
tilt-4-TATA	9.734	40.248

	Mean	Stdev
twist-4-TATA	74.189	46.886

	Mean	Stdev
rise-5-ATAT	1.765	1.063

	Mean	Stdev
roll-5-ATAT	35.642	18.476

	Mean	Stdev
shift-5-ATAT	0.000	1.252

	Mean	Stdev
slide-5-ATAT	-4.155	0.638

	Mean	Stdev
tilt-5-ATAT	0.020	32.060

	Mean	Stdev
twist-5-ATAT	-1.906	36.768

	Mean	Stdev
rise-6-TATA	3.831	2.124

	Mean	Stdev
roll-6-TATA	50.183	25.442

	Mean	Stdev
shift-6-TATA	0.000	1.319

	Mean	Stdev
slide-6-TATA	-1.679	2.652

	Mean	Stdev
tilt-6-TATA	13.450	41.372

	Mean	Stdev
twist-6-TATA	61.823	31.313

	Mean	Stdev
rise-7-ATAT	1.637	1.060

	Mean	Stdev
roll-7-ATAT	31.822	17.562

	Mean	Stdev
shift-7-ATAT	0.000	1.309

	Mean	Stdev
slide-7-ATAT	-4.045	0.623

	Mean	Stdev
tilt-7-ATAT	0.000	33.535

	Mean	Stdev
twist-7-ATAT	0.649	38.960

	Mean	Stdev
rise-8-TATA	3.438	2.650

	Mean	Stdev
roll-8-TATA	57.932	40.013

	Mean	Stdev
shift-8-TATA	0.000	1.950

	Mean	Stdev
slide-8-TATA	-1.886	2.806

	Mean	Stdev
tilt-8-TATA	12.533	45.064

	Mean	Stdev
twist-8-TATA	47.579	41.643

	Mean	Stdev
rise-9-ATAT	1.894	1.193

	Mean	Stdev
roll-9-ATAT	41.064	30.293

	Mean	Stdev
shift-9-ATAT	0.000	1.343

	Mean	Stdev
slide-9-ATAT	-3.484	1.448

	Mean	Stdev
tilt-9-ATAT	0.095	33.071

	Mean	Stdev
twist-9-ATAT	5.465	38.919

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