Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | A | - | C | - | A | - | A | - | A | - | C | - | A | - | A | - | A | - | C | - | A | - | A | - | A | - | C | - | G | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | T | - | G | - | T | - | T | - | T | - | G | - | T | - | T | - | T | - | G | - | T | - | T | - | T | - | G | - | C | - | G | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 5.045 | 4.860 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 5.424 | 5.496 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 5.115 | 4.968 | 
|  | Mean | Stdev | 
| 10_H61-27_O4-10 | 1.990 | 0.172 | 
|  | Mean | Stdev | 
| 10_N1-27_H3-10 | 1.972 | 0.118 | 
|  | Mean | Stdev | 
| 11_H61-26_O4-11 | 1.999 | 0.184 | 
|  | Mean | Stdev | 
| 11_N1-26_H3-11 | 1.975 | 0.120 | 
|  | Mean | Stdev | 
| 12_H41-25_O6-12 | 2.009 | 0.210 | 
|  | Mean | Stdev | 
| 12_N3-25_H1-12 | 1.983 | 0.111 | 
|  | Mean | Stdev | 
| 12_O2-25_H21-12 | 1.883 | 0.119 | 
|  | Mean | Stdev | 
| 13_H61-24_O4-13 | 1.998 | 0.181 | 
|  | Mean | Stdev | 
| 13_N1-24_H3-13 | 1.973 | 0.122 | 
|  | Mean | Stdev | 
| 14_H61-23_O4-14 | 1.988 | 0.173 | 
|  | Mean | Stdev | 
| 14_N1-23_H3-14 | 1.975 | 0.122 | 
|  | Mean | Stdev | 
| 15_H61-22_O4-15 | 2.038 | 0.216 | 
|  | Mean | Stdev | 
| 15_N1-22_H3-15 | 1.966 | 0.117 | 
|  | Mean | Stdev | 
| 16_H41-21_O6-16 | 2.011 | 0.231 | 
|  | Mean | Stdev | 
| 16_N3-21_H1-16 | 1.967 | 0.112 | 
|  | Mean | Stdev | 
| 16_O2-21_H21-16 | 1.890 | 0.127 | 
|  | Mean | Stdev | 
| 17_H1-20_N3-17 | 2.010 | 0.246 | 
|  | Mean | Stdev | 
| 17_H21-20_O2-17 | 1.915 | 0.230 | 
|  | Mean | Stdev | 
| 17_O6-20_H41-17 | 2.056 | 0.517 | 
|  | Mean | Stdev | 
| 18_H41-19_O6-18 | 3.600 | 3.619 | 
|  | Mean | Stdev | 
| 18_N3-19_H1-18 | 3.543 | 3.579 | 
|  | Mean | Stdev | 
| 18_O2-19_H21-18 | 3.688 | 4.206 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 2.291 | 1.483 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 2.190 | 1.105 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 2.085 | 0.964 | 
|  | Mean | Stdev | 
| 3_H61-34_O4-3 | 1.992 | 0.233 | 
|  | Mean | Stdev | 
| 3_N1-34_H3-3 | 1.992 | 0.182 | 
|  | Mean | Stdev | 
| 4_H41-33_O6-4 | 1.999 | 0.185 | 
|  | Mean | Stdev | 
| 4_N3-33_H1-4 | 1.990 | 0.106 | 
|  | Mean | Stdev | 
| 4_O2-33_H21-4 | 1.888 | 0.120 | 
|  | Mean | Stdev | 
| 5_H61-32_O4-5 | 1.996 | 0.187 | 
|  | Mean | Stdev | 
| 5_N1-32_H3-5 | 1.979 | 0.125 | 
|  | Mean | Stdev | 
| 6_H61-31_O4-6 | 1.996 | 0.174 | 
|  | Mean | Stdev | 
| 6_N1-31_H3-6 | 1.970 | 0.118 | 
|  | Mean | Stdev | 
| 7_H61-30_O4-7 | 2.001 | 0.183 | 
|  | Mean | Stdev | 
| 7_N1-30_H3-7 | 1.975 | 0.121 | 
|  | Mean | Stdev | 
| 8_H41-29_O6-8 | 2.010 | 0.206 | 
|  | Mean | Stdev | 
| 8_N3-29_H1-8 | 1.985 | 0.109 | 
|  | Mean | Stdev | 
| 8_O2-29_H21-8 | 1.881 | 0.118 | 
|  | Mean | Stdev | 
| 9_H61-28_O4-9 | 1.996 | 0.183 | 
|  | Mean | Stdev | 
| 9_N1-28_H3-9 | 1.971 | 0.118 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 5.1154 | 4.9680 | 
| 1 | H1-N3_1-36 | 5.0449 | 4.8599 | 
| 1 | H21-O2_1-36 | 5.4237 | 5.4960 | 
| 2 | H41-O6_2-35 | 2.2914 | 1.4832 | 
| 2 | N3-H1_2-35 | 2.1896 | 1.1049 | 
| 2 | O2-H21_2-35 | 2.0848 | 0.9635 | 
| 3 | N1-H3_3-34 | 1.9925 | 0.1819 | 
| 3 | H61-O4_3-34 | 1.9915 | 0.2334 | 
| 4 | H41-O6_4-33 | 1.9990 | 0.1849 | 
| 4 | N3-H1_4-33 | 1.9904 | 0.1057 | 
| 4 | O2-H21_4-33 | 1.8876 | 0.1205 | 
| 5 | N1-H3_5-32 | 1.9789 | 0.1246 | 
| 5 | H61-O4_5-32 | 1.9962 | 0.1869 | 
| 6 | N1-H3_6-31 | 1.9703 | 0.1180 | 
| 6 | H61-O4_6-31 | 1.9957 | 0.1745 | 
| 7 | N1-H3_7-30 | 1.9749 | 0.1213 | 
| 7 | H61-O4_7-30 | 2.0013 | 0.1829 | 
| 8 | H41-O6_8-29 | 2.0101 | 0.2056 | 
| 8 | N3-H1_8-29 | 1.9850 | 0.1093 | 
| 8 | O2-H21_8-29 | 1.8815 | 0.1177 | 
| 9 | N1-H3_9-28 | 1.9711 | 0.1182 | 
| 9 | H61-O4_9-28 | 1.9955 | 0.1832 | 
| 10 | N1-H3_10-27 | 1.9720 | 0.1181 | 
| 10 | H61-O4_10-27 | 1.9896 | 0.1724 | 
| 11 | N1-H3_11-26 | 1.9753 | 0.1199 | 
| 11 | H61-O4_11-26 | 1.9989 | 0.1843 | 
| 12 | H41-O6_12-25 | 2.0089 | 0.2103 | 
| 12 | N3-H1_12-25 | 1.9830 | 0.1110 | 
| 12 | O2-H21_12-25 | 1.8831 | 0.1186 | 
| 13 | N1-H3_13-24 | 1.9729 | 0.1216 | 
| 13 | H61-O4_13-24 | 1.9978 | 0.1809 | 
| 14 | N1-H3_14-23 | 1.9747 | 0.1219 | 
| 14 | H61-O4_14-23 | 1.9881 | 0.1728 | 
| 15 | N1-H3_15-22 | 1.9665 | 0.1169 | 
| 15 | H61-O4_15-22 | 2.0383 | 0.2158 | 
| 16 | H41-O6_16-21 | 2.0109 | 0.2307 | 
| 16 | N3-H1_16-21 | 1.9669 | 0.1123 | 
| 16 | O2-H21_16-21 | 1.8901 | 0.1267 | 
| 17 | O6-H41_17-20 | 2.0560 | 0.5166 | 
| 17 | H1-N3_17-20 | 2.0102 | 0.2460 | 
| 17 | H21-O2_17-20 | 1.9155 | 0.2295 | 
| 18 | H41-O6_18-19 | 3.6003 | 3.6193 | 
| 18 | N3-H1_18-19 | 3.5430 | 3.5791 | 
| 18 | O2-H21_18-19 | 3.6878 | 4.2060 |