Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | A | - | T | - | A | - | A | - | A | - | T | - | A | - | A | - | A | - | T | - | A | - | A | - | A | - | T | - | G | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | T | - | A | - | T | - | T | - | T | - | A | - | T | - | T | - | T | - | A | - | T | - | T | - | T | - | A | - | C | - | G | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 4.907 | 4.616 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 5.343 | 5.377 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 4.963 | 4.592 | 
|  | Mean | Stdev | 
| 10_H61-27_O4-10 | 2.014 | 0.189 | 
|  | Mean | Stdev | 
| 10_N1-27_H3-10 | 1.972 | 0.120 | 
|  | Mean | Stdev | 
| 11_H61-26_O4-11 | 2.041 | 0.195 | 
|  | Mean | Stdev | 
| 11_N1-26_H3-11 | 1.972 | 0.116 | 
|  | Mean | Stdev | 
| 12_H3-25_N1-12 | 1.981 | 0.130 | 
|  | Mean | Stdev | 
| 12_O4-25_H61-12 | 2.091 | 0.261 | 
|  | Mean | Stdev | 
| 13_H61-24_O4-13 | 2.026 | 0.208 | 
|  | Mean | Stdev | 
| 13_N1-24_H3-13 | 1.967 | 0.116 | 
|  | Mean | Stdev | 
| 14_H61-23_O4-14 | 2.014 | 0.205 | 
|  | Mean | Stdev | 
| 14_N1-23_H3-14 | 1.971 | 0.119 | 
|  | Mean | Stdev | 
| 15_H61-22_O4-15 | 2.052 | 0.220 | 
|  | Mean | Stdev | 
| 15_N1-22_H3-15 | 1.970 | 0.120 | 
|  | Mean | Stdev | 
| 16_H3-21_N1-16 | 1.981 | 0.125 | 
|  | Mean | Stdev | 
| 16_O4-21_H61-16 | 2.036 | 0.211 | 
|  | Mean | Stdev | 
| 17_H1-20_N3-17 | 2.095 | 0.603 | 
|  | Mean | Stdev | 
| 17_H21-20_O2-17 | 2.014 | 0.601 | 
|  | Mean | Stdev | 
| 17_O6-20_H41-17 | 2.148 | 0.842 | 
|  | Mean | Stdev | 
| 18_H41-19_O6-18 | 3.876 | 3.542 | 
|  | Mean | Stdev | 
| 18_N3-19_H1-18 | 3.737 | 3.345 | 
|  | Mean | Stdev | 
| 18_O2-19_H21-18 | 3.919 | 3.861 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 2.273 | 1.239 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 2.141 | 0.838 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 2.028 | 0.732 | 
|  | Mean | Stdev | 
| 3_H61-34_O4-3 | 2.034 | 0.247 | 
|  | Mean | Stdev | 
| 3_N1-34_H3-3 | 1.986 | 0.171 | 
|  | Mean | Stdev | 
| 4_H3-33_N1-4 | 1.980 | 0.127 | 
|  | Mean | Stdev | 
| 4_O4-33_H61-4 | 2.090 | 0.265 | 
|  | Mean | Stdev | 
| 5_H61-32_O4-5 | 2.024 | 0.217 | 
|  | Mean | Stdev | 
| 5_N1-32_H3-5 | 1.974 | 0.126 | 
|  | Mean | Stdev | 
| 6_H61-31_O4-6 | 2.013 | 0.190 | 
|  | Mean | Stdev | 
| 6_N1-31_H3-6 | 1.972 | 0.118 | 
|  | Mean | Stdev | 
| 7_H61-30_O4-7 | 2.042 | 0.196 | 
|  | Mean | Stdev | 
| 7_N1-30_H3-7 | 1.972 | 0.117 | 
|  | Mean | Stdev | 
| 8_H3-29_N1-8 | 1.978 | 0.139 | 
|  | Mean | Stdev | 
| 8_O4-29_H61-8 | 2.095 | 0.267 | 
|  | Mean | Stdev | 
| 9_H61-28_O4-9 | 3.600 | 0.268 | 
|  | Mean | Stdev | 
| 9_N1-28_H3-9 | 1.970 | 0.148 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 4.9631 | 4.5917 | 
| 1 | H1-N3_1-36 | 4.9067 | 4.6160 | 
| 1 | H21-O2_1-36 | 5.3435 | 5.3768 | 
| 2 | H41-O6_2-35 | 2.2735 | 1.2392 | 
| 2 | N3-H1_2-35 | 2.1411 | 0.8377 | 
| 2 | O2-H21_2-35 | 2.0283 | 0.7324 | 
| 3 | N1-H3_3-34 | 1.9858 | 0.1709 | 
| 3 | H61-O4_3-34 | 2.0340 | 0.2469 | 
| 4 | H3-N1_4-33 | 1.9805 | 0.1267 | 
| 4 | O4-H61_4-33 | 2.0900 | 0.2650 | 
| 5 | N1-H3_5-32 | 1.9736 | 0.1255 | 
| 5 | H61-O4_5-32 | 2.0242 | 0.2167 | 
| 6 | N1-H3_6-31 | 1.9716 | 0.1178 | 
| 6 | H61-O4_6-31 | 2.0130 | 0.1903 | 
| 7 | N1-H3_7-30 | 1.9718 | 0.1167 | 
| 7 | H61-O4_7-30 | 2.0423 | 0.1961 | 
| 8 | H3-N1_8-29 | 1.9783 | 0.1387 | 
| 8 | O4-H61_8-29 | 2.0947 | 0.2671 | 
| 9 | N1-H3_9-28 | 1.9705 | 0.1477 | 
| 9 | H61-O4_9-28 | 3.5996 | 0.2680 | 
| 10 | N1-H3_10-27 | 1.9719 | 0.1196 | 
| 10 | H61-O4_10-27 | 2.0140 | 0.1893 | 
| 11 | N1-H3_11-26 | 1.9718 | 0.1161 | 
| 11 | H61-O4_11-26 | 2.0412 | 0.1951 | 
| 12 | H3-N1_12-25 | 1.9812 | 0.1299 | 
| 12 | O4-H61_12-25 | 2.0908 | 0.2611 | 
| 13 | N1-H3_13-24 | 1.9674 | 0.1160 | 
| 13 | H61-O4_13-24 | 2.0256 | 0.2077 | 
| 14 | N1-H3_14-23 | 1.9709 | 0.1188 | 
| 14 | H61-O4_14-23 | 2.0135 | 0.2051 | 
| 15 | N1-H3_15-22 | 1.9703 | 0.1199 | 
| 15 | H61-O4_15-22 | 2.0516 | 0.2196 | 
| 16 | H3-N1_16-21 | 1.9806 | 0.1249 | 
| 16 | O4-H61_16-21 | 2.0361 | 0.2107 | 
| 17 | O6-H41_17-20 | 2.1482 | 0.8418 | 
| 17 | H1-N3_17-20 | 2.0951 | 0.6026 | 
| 17 | H21-O2_17-20 | 2.0140 | 0.6011 | 
| 18 | H41-O6_18-19 | 3.8759 | 3.5422 | 
| 18 | N3-H1_18-19 | 3.7369 | 3.3453 | 
| 18 | O2-H21_18-19 | 3.9193 | 3.8612 |