Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | A | - | G | - | A | - | G | - | A | - | G | - | A | - | G | - | A | - | G | - | A | - | G | - | A | - | G | - | G | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | T | - | C | - | T | - | C | - | T | - | C | - | T | - | C | - | T | - | C | - | T | - | C | - | T | - | C | - | C | - | G | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 2.406 | 1.598 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 2.406 | 1.904 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 2.435 | 1.744 | 
|  | Mean | Stdev | 
| 10_H1-27_N3-10 | 1.968 | 0.093 | 
|  | Mean | Stdev | 
| 10_H21-27_O2-10 | 1.905 | 0.132 | 
|  | Mean | Stdev | 
| 10_O6-27_H41-10 | 1.964 | 0.161 | 
|  | Mean | Stdev | 
| 11_H61-26_O4-11 | 2.027 | 0.221 | 
|  | Mean | Stdev | 
| 11_N1-26_H3-11 | 1.967 | 0.122 | 
|  | Mean | Stdev | 
| 12_H1-25_N3-12 | 1.969 | 0.095 | 
|  | Mean | Stdev | 
| 12_H21-25_O2-12 | 1.911 | 0.136 | 
|  | Mean | Stdev | 
| 12_O6-25_H41-12 | 1.963 | 0.159 | 
|  | Mean | Stdev | 
| 13_H61-24_O4-13 | 2.041 | 0.330 | 
|  | Mean | Stdev | 
| 13_N1-24_H3-13 | 1.990 | 0.268 | 
|  | Mean | Stdev | 
| 14_H1-23_N3-14 | 1.968 | 0.092 | 
|  | Mean | Stdev | 
| 14_H21-23_O2-14 | 1.911 | 0.130 | 
|  | Mean | Stdev | 
| 14_O6-23_H41-14 | 1.965 | 0.160 | 
|  | Mean | Stdev | 
| 15_H61-22_O4-15 | 2.036 | 0.228 | 
|  | Mean | Stdev | 
| 15_N1-22_H3-15 | 1.975 | 0.127 | 
|  | Mean | Stdev | 
| 16_H1-21_N3-16 | 1.952 | 0.092 | 
|  | Mean | Stdev | 
| 16_H21-21_O2-16 | 1.886 | 0.119 | 
|  | Mean | Stdev | 
| 16_O6-21_H41-16 | 1.968 | 0.171 | 
|  | Mean | Stdev | 
| 17_H1-20_N3-17 | 1.968 | 0.099 | 
|  | Mean | Stdev | 
| 17_H21-20_O2-17 | 1.895 | 0.126 | 
|  | Mean | Stdev | 
| 17_O6-20_H41-17 | 1.961 | 0.174 | 
|  | Mean | Stdev | 
| 18_H41-19_O6-18 | 2.022 | 0.462 | 
|  | Mean | Stdev | 
| 18_N3-19_H1-18 | 2.016 | 0.389 | 
|  | Mean | Stdev | 
| 18_O2-19_H21-18 | 1.935 | 0.439 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 1.959 | 0.155 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 1.976 | 0.094 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 1.903 | 0.134 | 
|  | Mean | Stdev | 
| 3_H61-34_O4-3 | 2.031 | 0.220 | 
|  | Mean | Stdev | 
| 3_N1-34_H3-3 | 1.967 | 0.123 | 
|  | Mean | Stdev | 
| 4_H1-33_N3-4 | 1.971 | 0.094 | 
|  | Mean | Stdev | 
| 4_H21-33_O2-4 | 1.910 | 0.133 | 
|  | Mean | Stdev | 
| 4_O6-33_H41-4 | 1.972 | 0.165 | 
|  | Mean | Stdev | 
| 5_H61-32_O4-5 | 2.036 | 0.241 | 
|  | Mean | Stdev | 
| 5_N1-32_H3-5 | 1.970 | 0.126 | 
|  | Mean | Stdev | 
| 6_H1-31_N3-6 | 1.964 | 0.095 | 
|  | Mean | Stdev | 
| 6_H21-31_O2-6 | 1.906 | 0.131 | 
|  | Mean | Stdev | 
| 6_O6-31_H41-6 | 1.965 | 0.164 | 
|  | Mean | Stdev | 
| 7_H61-30_O4-7 | 2.030 | 0.226 | 
|  | Mean | Stdev | 
| 7_N1-30_H3-7 | 1.974 | 0.126 | 
|  | Mean | Stdev | 
| 8_H1-29_N3-8 | 1.967 | 0.093 | 
|  | Mean | Stdev | 
| 8_H21-29_O2-8 | 1.910 | 0.132 | 
|  | Mean | Stdev | 
| 8_O6-29_H41-8 | 1.963 | 0.157 | 
|  | Mean | Stdev | 
| 9_H61-28_O4-9 | 2.027 | 0.221 | 
|  | Mean | Stdev | 
| 9_N1-28_H3-9 | 1.971 | 0.125 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 2.4352 | 1.7436 | 
| 1 | H1-N3_1-36 | 2.4063 | 1.5978 | 
| 1 | H21-O2_1-36 | 2.4058 | 1.9040 | 
| 2 | H41-O6_2-35 | 1.9592 | 0.1551 | 
| 2 | N3-H1_2-35 | 1.9759 | 0.0939 | 
| 2 | O2-H21_2-35 | 1.9029 | 0.1339 | 
| 3 | N1-H3_3-34 | 1.9668 | 0.1234 | 
| 3 | H61-O4_3-34 | 2.0311 | 0.2197 | 
| 4 | O6-H41_4-33 | 1.9720 | 0.1647 | 
| 4 | H1-N3_4-33 | 1.9708 | 0.0938 | 
| 4 | H21-O2_4-33 | 1.9103 | 0.1325 | 
| 5 | N1-H3_5-32 | 1.9697 | 0.1258 | 
| 5 | H61-O4_5-32 | 2.0364 | 0.2410 | 
| 6 | O6-H41_6-31 | 1.9652 | 0.1641 | 
| 6 | H1-N3_6-31 | 1.9638 | 0.0950 | 
| 6 | H21-O2_6-31 | 1.9058 | 0.1313 | 
| 7 | N1-H3_7-30 | 1.9743 | 0.1264 | 
| 7 | H61-O4_7-30 | 2.0301 | 0.2264 | 
| 8 | O6-H41_8-29 | 1.9631 | 0.1571 | 
| 8 | H1-N3_8-29 | 1.9671 | 0.0929 | 
| 8 | H21-O2_8-29 | 1.9096 | 0.1319 | 
| 9 | N1-H3_9-28 | 1.9714 | 0.1247 | 
| 9 | H61-O4_9-28 | 2.0267 | 0.2214 | 
| 10 | O6-H41_10-27 | 1.9637 | 0.1608 | 
| 10 | H1-N3_10-27 | 1.9677 | 0.0927 | 
| 10 | H21-O2_10-27 | 1.9052 | 0.1320 | 
| 11 | N1-H3_11-26 | 1.9671 | 0.1224 | 
| 11 | H61-O4_11-26 | 2.0266 | 0.2209 | 
| 12 | O6-H41_12-25 | 1.9629 | 0.1594 | 
| 12 | H1-N3_12-25 | 1.9686 | 0.0951 | 
| 12 | H21-O2_12-25 | 1.9108 | 0.1359 | 
| 13 | N1-H3_13-24 | 1.9900 | 0.2680 | 
| 13 | H61-O4_13-24 | 2.0410 | 0.3301 | 
| 14 | O6-H41_14-23 | 1.9648 | 0.1600 | 
| 14 | H1-N3_14-23 | 1.9679 | 0.0918 | 
| 14 | H21-O2_14-23 | 1.9108 | 0.1299 | 
| 15 | N1-H3_15-22 | 1.9754 | 0.1269 | 
| 15 | H61-O4_15-22 | 2.0358 | 0.2282 | 
| 16 | O6-H41_16-21 | 1.9685 | 0.1712 | 
| 16 | H1-N3_16-21 | 1.9525 | 0.0921 | 
| 16 | H21-O2_16-21 | 1.8859 | 0.1194 | 
| 17 | O6-H41_17-20 | 1.9614 | 0.1738 | 
| 17 | H1-N3_17-20 | 1.9678 | 0.0987 | 
| 17 | H21-O2_17-20 | 1.8951 | 0.1257 | 
| 18 | H41-O6_18-19 | 2.0219 | 0.4619 | 
| 18 | N3-H1_18-19 | 2.0160 | 0.3891 | 
| 18 | O2-H21_18-19 | 1.9346 | 0.4394 |