Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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17 |
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18 |
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| 5' |
G |
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C |
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G |
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C |
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C |
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G |
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G |
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C |
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C |
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G |
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G |
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C |
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C |
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G |
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G |
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C |
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G |
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C |
3' |
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x |
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| 3' |
C |
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G |
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C |
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G |
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G |
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C |
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C |
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G |
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G |
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C |
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C |
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G |
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G |
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C |
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C |
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G |
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C |
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G |
5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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Interactive Sequence (see Help)
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Sorry, information not available...
| Mean | Stdev |
| 1_H1-36_N3-1 | 2.006 | 0.224 |
| Mean | Stdev |
| 1_H21-36_O2-1 | 1.923 | 0.235 |
| Mean | Stdev |
| 1_O6-36_H41-1 | 2.000 | 0.317 |
| Mean | Stdev |
| 10_H1-27_N3-10 | 1.965 | 0.094 |
| Mean | Stdev |
| 10_H21-27_O2-10 | 1.880 | 0.117 |
| Mean | Stdev |
| 10_O6-27_H41-10 | 1.978 | 0.174 |
| Mean | Stdev |
| 11_H1-26_N3-11 | 1.964 | 0.094 |
| Mean | Stdev |
| 11_H21-26_O2-11 | 1.923 | 0.135 |
| Mean | Stdev |
| 11_O6-26_H41-11 | 1.970 | 0.165 |
| Mean | Stdev |
| 12_H41-25_O6-12 | 1.968 | 0.169 |
| Mean | Stdev |
| 12_N3-25_H1-12 | 1.963 | 0.092 |
| Mean | Stdev |
| 12_O2-25_H21-12 | 1.922 | 0.136 |
| Mean | Stdev |
| 13_H41-24_O6-13 | 1.982 | 0.196 |
| Mean | Stdev |
| 13_N3-24_H1-13 | 1.966 | 0.100 |
| Mean | Stdev |
| 13_O2-24_H21-13 | 1.881 | 0.121 |
| Mean | Stdev |
| 14_H1-23_N3-14 | 1.964 | 0.091 |
| Mean | Stdev |
| 14_H21-23_O2-14 | 1.880 | 0.118 |
| Mean | Stdev |
| 14_O6-23_H41-14 | 1.975 | 0.171 |
| Mean | Stdev |
| 15_H1-22_N3-15 | 1.968 | 0.092 |
| Mean | Stdev |
| 15_H21-22_O2-15 | 1.927 | 0.137 |
| Mean | Stdev |
| 15_O6-22_H41-15 | 1.966 | 0.165 |
| Mean | Stdev |
| 16_H41-21_O6-16 | 1.958 | 0.160 |
| Mean | Stdev |
| 16_N3-21_H1-16 | 1.956 | 0.091 |
| Mean | Stdev |
| 16_O2-21_H21-16 | 1.900 | 0.126 |
| Mean | Stdev |
| 17_H1-20_N3-17 | 2.047 | 0.461 |
| Mean | Stdev |
| 17_H21-20_O2-17 | 1.974 | 0.508 |
| Mean | Stdev |
| 17_O6-20_H41-17 | 2.090 | 0.698 |
| Mean | Stdev |
| 18_H41-19_O6-18 | 4.385 | 4.738 |
| Mean | Stdev |
| 18_N3-19_H1-18 | 3.969 | 3.909 |
| Mean | Stdev |
| 18_O2-19_H21-18 | 3.914 | 3.835 |
| Mean | Stdev |
| 2_H41-35_O6-2 | 1.963 | 0.160 |
| Mean | Stdev |
| 2_N3-35_H1-2 | 1.974 | 0.094 |
| Mean | Stdev |
| 2_O2-35_H21-2 | 1.901 | 0.126 |
| Mean | Stdev |
| 3_H1-34_N3-3 | 1.958 | 0.091 |
| Mean | Stdev |
| 3_H21-34_O2-3 | 1.896 | 0.124 |
| Mean | Stdev |
| 3_O6-34_H41-3 | 1.963 | 0.161 |
| Mean | Stdev |
| 4_H41-33_O6-4 | 1.968 | 0.166 |
| Mean | Stdev |
| 4_N3-33_H1-4 | 1.968 | 0.093 |
| Mean | Stdev |
| 4_O2-33_H21-4 | 1.922 | 0.138 |
| Mean | Stdev |
| 5_H41-32_O6-5 | 1.975 | 0.170 |
| Mean | Stdev |
| 5_N3-32_H1-5 | 1.965 | 0.093 |
| Mean | Stdev |
| 5_O2-32_H21-5 | 1.880 | 0.117 |
| Mean | Stdev |
| 6_H1-31_N3-6 | 1.969 | 0.120 |
| Mean | Stdev |
| 6_H21-31_O2-6 | 1.880 | 0.120 |
| Mean | Stdev |
| 6_O6-31_H41-6 | 1.986 | 0.252 |
| Mean | Stdev |
| 7_H1-30_N3-7 | 1.960 | 0.090 |
| Mean | Stdev |
| 7_H21-30_O2-7 | 1.917 | 0.130 |
| Mean | Stdev |
| 7_O6-30_H41-7 | 1.968 | 0.155 |
| Mean | Stdev |
| 8_H41-29_O6-8 | 1.971 | 0.165 |
| Mean | Stdev |
| 8_N3-29_H1-8 | 1.961 | 0.092 |
| Mean | Stdev |
| 8_O2-29_H21-8 | 1.917 | 0.135 |
| Mean | Stdev |
| 9_H41-28_O6-9 | 1.982 | 0.198 |
| Mean | Stdev |
| 9_N3-28_H1-9 | 1.966 | 0.101 |
| Mean | Stdev |
| 9_O2-28_H21-9 | 1.880 | 0.118 |
| Nucleotide Number | Hydrogen Bond | Mean | Stdev |
| 1 | O6-H41_1-36 | 2.0000 | 0.3171 |
| 1 | H1-N3_1-36 | 2.0063 | 0.2242 |
| 1 | H21-O2_1-36 | 1.9232 | 0.2351 |
| 2 | H41-O6_2-35 | 1.9634 | 0.1604 |
| 2 | N3-H1_2-35 | 1.9745 | 0.0939 |
| 2 | O2-H21_2-35 | 1.9008 | 0.1259 |
| 3 | O6-H41_3-34 | 1.9634 | 0.1613 |
| 3 | H1-N3_3-34 | 1.9575 | 0.0907 |
| 3 | H21-O2_3-34 | 1.8959 | 0.1239 |
| 4 | H41-O6_4-33 | 1.9685 | 0.1659 |
| 4 | N3-H1_4-33 | 1.9677 | 0.0931 |
| 4 | O2-H21_4-33 | 1.9222 | 0.1377 |
| 5 | H41-O6_5-32 | 1.9749 | 0.1702 |
| 5 | N3-H1_5-32 | 1.9646 | 0.0926 |
| 5 | O2-H21_5-32 | 1.8804 | 0.1172 |
| 6 | O6-H41_6-31 | 1.9858 | 0.2519 |
| 6 | H1-N3_6-31 | 1.9686 | 0.1203 |
| 6 | H21-O2_6-31 | 1.8799 | 0.1197 |
| 7 | O6-H41_7-30 | 1.9676 | 0.1555 |
| 7 | H1-N3_7-30 | 1.9599 | 0.0905 |
| 7 | H21-O2_7-30 | 1.9169 | 0.1302 |
| 8 | H41-O6_8-29 | 1.9714 | 0.1645 |
| 8 | N3-H1_8-29 | 1.9614 | 0.0917 |
| 8 | O2-H21_8-29 | 1.9173 | 0.1346 |
| 9 | H41-O6_9-28 | 1.9824 | 0.1975 |
| 9 | N3-H1_9-28 | 1.9664 | 0.1012 |
| 9 | O2-H21_9-28 | 1.8796 | 0.1182 |
| 10 | O6-H41_10-27 | 1.9780 | 0.1743 |
| 10 | H1-N3_10-27 | 1.9653 | 0.0944 |
| 10 | H21-O2_10-27 | 1.8799 | 0.1170 |
| 11 | O6-H41_11-26 | 1.9702 | 0.1652 |
| 11 | H1-N3_11-26 | 1.9638 | 0.0939 |
| 11 | H21-O2_11-26 | 1.9226 | 0.1345 |
| 12 | H41-O6_12-25 | 1.9679 | 0.1693 |
| 12 | N3-H1_12-25 | 1.9633 | 0.0917 |
| 12 | O2-H21_12-25 | 1.9217 | 0.1360 |
| 13 | H41-O6_13-24 | 1.9818 | 0.1964 |
| 13 | N3-H1_13-24 | 1.9658 | 0.1003 |
| 13 | O2-H21_13-24 | 1.8806 | 0.1212 |
| 14 | O6-H41_14-23 | 1.9749 | 0.1710 |
| 14 | H1-N3_14-23 | 1.9645 | 0.0907 |
| 14 | H21-O2_14-23 | 1.8804 | 0.1183 |
| 15 | O6-H41_15-22 | 1.9663 | 0.1651 |
| 15 | H1-N3_15-22 | 1.9676 | 0.0921 |
| 15 | H21-O2_15-22 | 1.9274 | 0.1373 |
| 16 | H41-O6_16-21 | 1.9576 | 0.1603 |
| 16 | N3-H1_16-21 | 1.9563 | 0.0907 |
| 16 | O2-H21_16-21 | 1.9000 | 0.1257 |
| 17 | O6-H41_17-20 | 2.0900 | 0.6982 |
| 17 | H1-N3_17-20 | 2.0469 | 0.4606 |
| 17 | H21-O2_17-20 | 1.9740 | 0.5081 |
| 18 | H41-O6_18-19 | 4.3849 | 4.7384 |
| 18 | N3-H1_18-19 | 3.9693 | 3.9086 |
| 18 | O2-H21_18-19 | 3.9143 | 3.8353 |
