Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | G | - | T | - | C | - | G | - | G | - | T | - | C | - | G | - | G | - | T | - | C | - | G | - | G | - | T | - | G | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | C | - | A | - | G | - | C | - | C | - | A | - | G | - | C | - | C | - | A | - | G | - | C | - | C | - | A | - | C | - | G | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 2.835 | 2.656 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 2.899 | 3.007 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 2.853 | 2.698 | 
|  | Mean | Stdev | 
| 10_H1-27_N3-10 | 1.965 | 0.095 | 
|  | Mean | Stdev | 
| 10_H21-27_O2-10 | 1.878 | 0.117 | 
|  | Mean | Stdev | 
| 10_O6-27_H41-10 | 1.983 | 0.182 | 
|  | Mean | Stdev | 
| 11_H1-26_N3-11 | 1.964 | 0.093 | 
|  | Mean | Stdev | 
| 11_H21-26_O2-11 | 1.908 | 0.132 | 
|  | Mean | Stdev | 
| 11_O6-26_H41-11 | 1.987 | 0.168 | 
|  | Mean | Stdev | 
| 12_H3-25_N1-12 | 1.984 | 0.122 | 
|  | Mean | Stdev | 
| 12_O4-25_H61-12 | 1.966 | 0.168 | 
|  | Mean | Stdev | 
| 13_H41-24_O6-13 | 1.964 | 0.169 | 
|  | Mean | Stdev | 
| 13_N3-24_H1-13 | 1.966 | 0.094 | 
|  | Mean | Stdev | 
| 13_O2-24_H21-13 | 1.891 | 0.125 | 
|  | Mean | Stdev | 
| 14_H1-23_N3-14 | 1.967 | 0.096 | 
|  | Mean | Stdev | 
| 14_H21-23_O2-14 | 1.881 | 0.118 | 
|  | Mean | Stdev | 
| 14_O6-23_H41-14 | 1.979 | 0.180 | 
|  | Mean | Stdev | 
| 15_H1-22_N3-15 | 1.970 | 0.098 | 
|  | Mean | Stdev | 
| 15_H21-22_O2-15 | 1.910 | 0.132 | 
|  | Mean | Stdev | 
| 15_O6-22_H41-15 | 1.990 | 0.178 | 
|  | Mean | Stdev | 
| 16_H3-21_N1-16 | 1.969 | 0.121 | 
|  | Mean | Stdev | 
| 16_O4-21_H61-16 | 1.994 | 0.187 | 
|  | Mean | Stdev | 
| 17_H1-20_N3-17 | 1.982 | 0.133 | 
|  | Mean | Stdev | 
| 17_H21-20_O2-17 | 1.908 | 0.148 | 
|  | Mean | Stdev | 
| 17_O6-20_H41-17 | 1.973 | 0.233 | 
|  | Mean | Stdev | 
| 18_H41-19_O6-18 | 2.268 | 1.619 | 
|  | Mean | Stdev | 
| 18_N3-19_H1-18 | 2.229 | 1.377 | 
|  | Mean | Stdev | 
| 18_O2-19_H21-18 | 2.156 | 1.417 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 2.049 | 0.490 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 2.007 | 0.219 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 1.917 | 0.185 | 
|  | Mean | Stdev | 
| 3_H1-34_N3-3 | 1.966 | 0.097 | 
|  | Mean | Stdev | 
| 3_H21-34_O2-3 | 1.887 | 0.120 | 
|  | Mean | Stdev | 
| 3_O6-34_H41-3 | 1.989 | 0.169 | 
|  | Mean | Stdev | 
| 4_H3-33_N1-4 | 1.996 | 0.125 | 
|  | Mean | Stdev | 
| 4_O4-33_H61-4 | 1.969 | 0.172 | 
|  | Mean | Stdev | 
| 5_H41-32_O6-5 | 1.962 | 0.165 | 
|  | Mean | Stdev | 
| 5_N3-32_H1-5 | 1.970 | 0.096 | 
|  | Mean | Stdev | 
| 5_O2-32_H21-5 | 1.896 | 0.123 | 
|  | Mean | Stdev | 
| 6_H1-31_N3-6 | 1.968 | 0.110 | 
|  | Mean | Stdev | 
| 6_H21-31_O2-6 | 1.881 | 0.120 | 
|  | Mean | Stdev | 
| 6_O6-31_H41-6 | 1.991 | 0.229 | 
|  | Mean | Stdev | 
| 7_H1-30_N3-7 | 1.966 | 0.095 | 
|  | Mean | Stdev | 
| 7_H21-30_O2-7 | 1.903 | 0.130 | 
|  | Mean | Stdev | 
| 7_O6-30_H41-7 | 1.991 | 0.175 | 
|  | Mean | Stdev | 
| 8_H3-29_N1-8 | 1.986 | 0.123 | 
|  | Mean | Stdev | 
| 8_O4-29_H61-8 | 1.973 | 0.175 | 
|  | Mean | Stdev | 
| 9_H41-28_O6-9 | 1.967 | 0.160 | 
|  | Mean | Stdev | 
| 9_N3-28_H1-9 | 1.969 | 0.093 | 
|  | Mean | Stdev | 
| 9_O2-28_H21-9 | 1.895 | 0.124 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 2.8529 | 2.6983 | 
| 1 | H1-N3_1-36 | 2.8349 | 2.6556 | 
| 1 | H21-O2_1-36 | 2.8991 | 3.0074 | 
| 2 | H41-O6_2-35 | 2.0485 | 0.4899 | 
| 2 | N3-H1_2-35 | 2.0073 | 0.2187 | 
| 2 | O2-H21_2-35 | 1.9173 | 0.1852 | 
| 3 | O6-H41_3-34 | 1.9894 | 0.1690 | 
| 3 | H1-N3_3-34 | 1.9658 | 0.0969 | 
| 3 | H21-O2_3-34 | 1.8870 | 0.1205 | 
| 4 | H3-N1_4-33 | 1.9955 | 0.1252 | 
| 4 | O4-H61_4-33 | 1.9688 | 0.1715 | 
| 5 | H41-O6_5-32 | 1.9621 | 0.1648 | 
| 5 | N3-H1_5-32 | 1.9700 | 0.0956 | 
| 5 | O2-H21_5-32 | 1.8962 | 0.1235 | 
| 6 | O6-H41_6-31 | 1.9908 | 0.2293 | 
| 6 | H1-N3_6-31 | 1.9681 | 0.1102 | 
| 6 | H21-O2_6-31 | 1.8812 | 0.1202 | 
| 7 | O6-H41_7-30 | 1.9914 | 0.1751 | 
| 7 | H1-N3_7-30 | 1.9655 | 0.0946 | 
| 7 | H21-O2_7-30 | 1.9033 | 0.1296 | 
| 8 | H3-N1_8-29 | 1.9865 | 0.1234 | 
| 8 | O4-H61_8-29 | 1.9731 | 0.1747 | 
| 9 | H41-O6_9-28 | 1.9674 | 0.1596 | 
| 9 | N3-H1_9-28 | 1.9692 | 0.0930 | 
| 9 | O2-H21_9-28 | 1.8952 | 0.1239 | 
| 10 | O6-H41_10-27 | 1.9833 | 0.1816 | 
| 10 | H1-N3_10-27 | 1.9651 | 0.0949 | 
| 10 | H21-O2_10-27 | 1.8782 | 0.1168 | 
| 11 | O6-H41_11-26 | 1.9872 | 0.1683 | 
| 11 | H1-N3_11-26 | 1.9638 | 0.0935 | 
| 11 | H21-O2_11-26 | 1.9081 | 0.1317 | 
| 12 | H3-N1_12-25 | 1.9842 | 0.1224 | 
| 12 | O4-H61_12-25 | 1.9663 | 0.1682 | 
| 13 | H41-O6_13-24 | 1.9643 | 0.1691 | 
| 13 | N3-H1_13-24 | 1.9662 | 0.0940 | 
| 13 | O2-H21_13-24 | 1.8912 | 0.1247 | 
| 14 | O6-H41_14-23 | 1.9790 | 0.1800 | 
| 14 | H1-N3_14-23 | 1.9674 | 0.0964 | 
| 14 | H21-O2_14-23 | 1.8814 | 0.1179 | 
| 15 | O6-H41_15-22 | 1.9905 | 0.1777 | 
| 15 | H1-N3_15-22 | 1.9696 | 0.0977 | 
| 15 | H21-O2_15-22 | 1.9100 | 0.1324 | 
| 16 | H3-N1_16-21 | 1.9690 | 0.1208 | 
| 16 | O4-H61_16-21 | 1.9944 | 0.1874 | 
| 17 | O6-H41_17-20 | 1.9733 | 0.2327 | 
| 17 | H1-N3_17-20 | 1.9823 | 0.1326 | 
| 17 | H21-O2_17-20 | 1.9081 | 0.1484 | 
| 18 | H41-O6_18-19 | 2.2683 | 1.6194 | 
| 18 | N3-H1_18-19 | 2.2293 | 1.3772 | 
| 18 | O2-H21_18-19 | 2.1563 | 1.4172 |