Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | A | - | C | - | G | - | A | - | A | - | C | - | G | - | A | - | A | - | C | - | G | - | A | - | A | - | C | - | G | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | T | - | G | - | C | - | T | - | T | - | G | - | C | - | T | - | T | - | G | - | C | - | T | - | T | - | G | - | C | - | G | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 2.041 | 0.411 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 1.953 | 0.411 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 2.068 | 0.608 | 
|  | Mean | Stdev | 
| 10_H61-27_O4-10 | 1.990 | 0.184 | 
|  | Mean | Stdev | 
| 10_N1-27_H3-10 | 1.983 | 0.124 | 
|  | Mean | Stdev | 
| 11_H61-26_O4-11 | 1.995 | 0.184 | 
|  | Mean | Stdev | 
| 11_N1-26_H3-11 | 1.975 | 0.119 | 
|  | Mean | Stdev | 
| 12_H41-25_O6-12 | 2.006 | 0.197 | 
|  | Mean | Stdev | 
| 12_N3-25_H1-12 | 1.983 | 0.105 | 
|  | Mean | Stdev | 
| 12_O2-25_H21-12 | 1.892 | 0.122 | 
|  | Mean | Stdev | 
| 13_H1-24_N3-13 | 1.970 | 0.095 | 
|  | Mean | Stdev | 
| 13_H21-24_O2-13 | 1.896 | 0.128 | 
|  | Mean | Stdev | 
| 13_O6-24_H41-13 | 1.969 | 0.168 | 
|  | Mean | Stdev | 
| 14_H61-23_O4-14 | 1.983 | 0.181 | 
|  | Mean | Stdev | 
| 14_N1-23_H3-14 | 1.988 | 0.127 | 
|  | Mean | Stdev | 
| 15_H61-22_O4-15 | 2.021 | 0.210 | 
|  | Mean | Stdev | 
| 15_N1-22_H3-15 | 1.971 | 0.116 | 
|  | Mean | Stdev | 
| 16_H41-21_O6-16 | 2.000 | 0.197 | 
|  | Mean | Stdev | 
| 16_N3-21_H1-16 | 1.960 | 0.103 | 
|  | Mean | Stdev | 
| 16_O2-21_H21-16 | 1.892 | 0.128 | 
|  | Mean | Stdev | 
| 17_H1-20_N3-17 | 2.359 | 0.667 | 
|  | Mean | Stdev | 
| 17_H21-20_O2-17 | 2.145 | 0.665 | 
|  | Mean | Stdev | 
| 17_O6-20_H41-17 | 2.896 | 1.296 | 
|  | Mean | Stdev | 
| 18_H41-19_O6-18 | 8.478 | 5.602 | 
|  | Mean | Stdev | 
| 18_N3-19_H1-18 | 8.595 | 5.781 | 
|  | Mean | Stdev | 
| 18_O2-19_H21-18 | 9.642 | 6.527 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 1.981 | 0.254 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 1.984 | 0.157 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 1.916 | 0.224 | 
|  | Mean | Stdev | 
| 3_H61-34_O4-3 | 1.996 | 0.193 | 
|  | Mean | Stdev | 
| 3_N1-34_H3-3 | 1.975 | 0.120 | 
|  | Mean | Stdev | 
| 4_H41-33_O6-4 | 1.985 | 0.174 | 
|  | Mean | Stdev | 
| 4_N3-33_H1-4 | 1.980 | 0.100 | 
|  | Mean | Stdev | 
| 4_O2-33_H21-4 | 1.891 | 0.122 | 
|  | Mean | Stdev | 
| 5_H1-32_N3-5 | 1.970 | 0.096 | 
|  | Mean | Stdev | 
| 5_H21-32_O2-5 | 1.905 | 0.130 | 
|  | Mean | Stdev | 
| 5_O6-32_H41-5 | 1.970 | 0.173 | 
|  | Mean | Stdev | 
| 6_H61-31_O4-6 | 2.002 | 0.227 | 
|  | Mean | Stdev | 
| 6_N1-31_H3-6 | 1.986 | 0.153 | 
|  | Mean | Stdev | 
| 7_H61-30_O4-7 | 1.996 | 0.192 | 
|  | Mean | Stdev | 
| 7_N1-30_H3-7 | 1.975 | 0.120 | 
|  | Mean | Stdev | 
| 8_H41-29_O6-8 | 2.007 | 0.200 | 
|  | Mean | Stdev | 
| 8_N3-29_H1-8 | 1.982 | 0.105 | 
|  | Mean | Stdev | 
| 8_O2-29_H21-8 | 1.891 | 0.120 | 
|  | Mean | Stdev | 
| 9_H1-28_N3-9 | 1.970 | 0.096 | 
|  | Mean | Stdev | 
| 9_H21-28_O2-9 | 1.894 | 0.124 | 
|  | Mean | Stdev | 
| 9_O6-28_H41-9 | 1.970 | 0.172 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 2.0679 | 0.6081 | 
| 1 | H1-N3_1-36 | 2.0410 | 0.4108 | 
| 1 | H21-O2_1-36 | 1.9531 | 0.4115 | 
| 2 | H41-O6_2-35 | 1.9812 | 0.2538 | 
| 2 | N3-H1_2-35 | 1.9835 | 0.1572 | 
| 2 | O2-H21_2-35 | 1.9156 | 0.2242 | 
| 3 | N1-H3_3-34 | 1.9751 | 0.1196 | 
| 3 | H61-O4_3-34 | 1.9962 | 0.1933 | 
| 4 | H41-O6_4-33 | 1.9850 | 0.1742 | 
| 4 | N3-H1_4-33 | 1.9805 | 0.1004 | 
| 4 | O2-H21_4-33 | 1.8907 | 0.1222 | 
| 5 | O6-H41_5-32 | 1.9698 | 0.1731 | 
| 5 | H1-N3_5-32 | 1.9698 | 0.0958 | 
| 5 | H21-O2_5-32 | 1.9054 | 0.1298 | 
| 6 | N1-H3_6-31 | 1.9861 | 0.1533 | 
| 6 | H61-O4_6-31 | 2.0017 | 0.2274 | 
| 7 | N1-H3_7-30 | 1.9749 | 0.1203 | 
| 7 | H61-O4_7-30 | 1.9963 | 0.1917 | 
| 8 | H41-O6_8-29 | 2.0071 | 0.1996 | 
| 8 | N3-H1_8-29 | 1.9825 | 0.1050 | 
| 8 | O2-H21_8-29 | 1.8906 | 0.1202 | 
| 9 | O6-H41_9-28 | 1.9702 | 0.1723 | 
| 9 | H1-N3_9-28 | 1.9701 | 0.0957 | 
| 9 | H21-O2_9-28 | 1.8938 | 0.1241 | 
| 10 | N1-H3_10-27 | 1.9829 | 0.1239 | 
| 10 | H61-O4_10-27 | 1.9898 | 0.1839 | 
| 11 | N1-H3_11-26 | 1.9746 | 0.1193 | 
| 11 | H61-O4_11-26 | 1.9953 | 0.1836 | 
| 12 | H41-O6_12-25 | 2.0056 | 0.1969 | 
| 12 | N3-H1_12-25 | 1.9826 | 0.1052 | 
| 12 | O2-H21_12-25 | 1.8918 | 0.1218 | 
| 13 | O6-H41_13-24 | 1.9688 | 0.1677 | 
| 13 | H1-N3_13-24 | 1.9702 | 0.0947 | 
| 13 | H21-O2_13-24 | 1.8962 | 0.1278 | 
| 14 | N1-H3_14-23 | 1.9877 | 0.1273 | 
| 14 | H61-O4_14-23 | 1.9830 | 0.1814 | 
| 15 | N1-H3_15-22 | 1.9710 | 0.1160 | 
| 15 | H61-O4_15-22 | 2.0212 | 0.2100 | 
| 16 | H41-O6_16-21 | 1.9999 | 0.1973 | 
| 16 | N3-H1_16-21 | 1.9601 | 0.1026 | 
| 16 | O2-H21_16-21 | 1.8916 | 0.1278 | 
| 17 | O6-H41_17-20 | 2.8961 | 1.2964 | 
| 17 | H1-N3_17-20 | 2.3589 | 0.6671 | 
| 17 | H21-O2_17-20 | 2.1449 | 0.6650 | 
| 18 | H41-O6_18-19 | 8.4778 | 5.6017 | 
| 18 | N3-H1_18-19 | 8.5949 | 5.7814 | 
| 18 | O2-H21_18-19 | 9.6420 | 6.5271 |