Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | A | - | T | - | G | - | A | - | A | - | T | - | G | - | A | - | A | - | T | - | G | - | A | - | A | - | T | - | G | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | T | - | A | - | C | - | T | - | T | - | A | - | C | - | T | - | T | - | A | - | C | - | T | - | T | - | A | - | C | - | G | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 2.759 | 2.232 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 2.725 | 2.436 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 2.909 | 2.573 | 
|  | Mean | Stdev | 
| 10_H61-27_O4-10 | 2.008 | 0.193 | 
|  | Mean | Stdev | 
| 10_N1-27_H3-10 | 1.984 | 0.124 | 
|  | Mean | Stdev | 
| 11_H61-26_O4-11 | 2.037 | 0.205 | 
|  | Mean | Stdev | 
| 11_N1-26_H3-11 | 1.976 | 0.119 | 
|  | Mean | Stdev | 
| 12_H3-25_N1-12 | 2.001 | 0.254 | 
|  | Mean | Stdev | 
| 12_O4-25_H61-12 | 2.046 | 0.318 | 
|  | Mean | Stdev | 
| 13_H1-24_N3-13 | 1.971 | 0.095 | 
|  | Mean | Stdev | 
| 13_H21-24_O2-13 | 1.899 | 0.127 | 
|  | Mean | Stdev | 
| 13_O6-24_H41-13 | 1.973 | 0.164 | 
|  | Mean | Stdev | 
| 14_H61-23_O4-14 | 2.010 | 0.211 | 
|  | Mean | Stdev | 
| 14_N1-23_H3-14 | 1.991 | 0.129 | 
|  | Mean | Stdev | 
| 15_H61-22_O4-15 | 2.033 | 0.205 | 
|  | Mean | Stdev | 
| 15_N1-22_H3-15 | 1.982 | 0.124 | 
|  | Mean | Stdev | 
| 16_H3-21_N1-16 | 2.006 | 0.235 | 
|  | Mean | Stdev | 
| 16_O4-21_H61-16 | 2.050 | 0.300 | 
|  | Mean | Stdev | 
| 17_H1-20_N3-17 | 1.975 | 0.099 | 
|  | Mean | Stdev | 
| 17_H21-20_O2-17 | 1.899 | 0.133 | 
|  | Mean | Stdev | 
| 17_O6-20_H41-17 | 1.979 | 0.174 | 
|  | Mean | Stdev | 
| 18_H41-19_O6-18 | 5.671 | 4.540 | 
|  | Mean | Stdev | 
| 18_N3-19_H1-18 | 5.249 | 4.013 | 
|  | Mean | Stdev | 
| 18_O2-19_H21-18 | 5.403 | 4.276 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 2.384 | 2.062 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 2.299 | 1.593 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 2.188 | 1.407 | 
|  | Mean | Stdev | 
| 3_H61-34_O4-3 | 2.032 | 0.206 | 
|  | Mean | Stdev | 
| 3_N1-34_H3-3 | 1.977 | 0.121 | 
|  | Mean | Stdev | 
| 4_H3-33_N1-4 | 1.986 | 0.223 | 
|  | Mean | Stdev | 
| 4_O4-33_H61-4 | 2.046 | 0.294 | 
|  | Mean | Stdev | 
| 5_H1-32_N3-5 | 1.971 | 0.097 | 
|  | Mean | Stdev | 
| 5_H21-32_O2-5 | 1.902 | 0.128 | 
|  | Mean | Stdev | 
| 5_O6-32_H41-5 | 1.969 | 0.170 | 
|  | Mean | Stdev | 
| 6_H61-31_O4-6 | 2.006 | 0.191 | 
|  | Mean | Stdev | 
| 6_N1-31_H3-6 | 1.990 | 0.128 | 
|  | Mean | Stdev | 
| 7_H61-30_O4-7 | 2.031 | 0.200 | 
|  | Mean | Stdev | 
| 7_N1-30_H3-7 | 1.972 | 0.117 | 
|  | Mean | Stdev | 
| 8_H3-29_N1-8 | 1.986 | 0.133 | 
|  | Mean | Stdev | 
| 8_O4-29_H61-8 | 2.030 | 0.239 | 
|  | Mean | Stdev | 
| 9_H1-28_N3-9 | 1.970 | 0.104 | 
|  | Mean | Stdev | 
| 9_H21-28_O2-9 | 1.899 | 0.128 | 
|  | Mean | Stdev | 
| 9_O6-28_H41-9 | 1.972 | 0.189 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 2.9093 | 2.5733 | 
| 1 | H1-N3_1-36 | 2.7587 | 2.2324 | 
| 1 | H21-O2_1-36 | 2.7254 | 2.4360 | 
| 2 | H41-O6_2-35 | 2.3840 | 2.0623 | 
| 2 | N3-H1_2-35 | 2.2989 | 1.5929 | 
| 2 | O2-H21_2-35 | 2.1880 | 1.4065 | 
| 3 | N1-H3_3-34 | 1.9772 | 0.1208 | 
| 3 | H61-O4_3-34 | 2.0321 | 0.2064 | 
| 4 | H3-N1_4-33 | 1.9864 | 0.2227 | 
| 4 | O4-H61_4-33 | 2.0463 | 0.2942 | 
| 5 | O6-H41_5-32 | 1.9686 | 0.1700 | 
| 5 | H1-N3_5-32 | 1.9706 | 0.0974 | 
| 5 | H21-O2_5-32 | 1.9018 | 0.1281 | 
| 6 | N1-H3_6-31 | 1.9898 | 0.1282 | 
| 6 | H61-O4_6-31 | 2.0059 | 0.1909 | 
| 7 | N1-H3_7-30 | 1.9720 | 0.1166 | 
| 7 | H61-O4_7-30 | 2.0312 | 0.2003 | 
| 8 | H3-N1_8-29 | 1.9856 | 0.1330 | 
| 8 | O4-H61_8-29 | 2.0304 | 0.2392 | 
| 9 | O6-H41_9-28 | 1.9722 | 0.1886 | 
| 9 | H1-N3_9-28 | 1.9697 | 0.1038 | 
| 9 | H21-O2_9-28 | 1.8986 | 0.1283 | 
| 10 | N1-H3_10-27 | 1.9845 | 0.1244 | 
| 10 | H61-O4_10-27 | 2.0076 | 0.1930 | 
| 11 | N1-H3_11-26 | 1.9760 | 0.1192 | 
| 11 | H61-O4_11-26 | 2.0367 | 0.2047 | 
| 12 | H3-N1_12-25 | 2.0013 | 0.2538 | 
| 12 | O4-H61_12-25 | 2.0463 | 0.3178 | 
| 13 | O6-H41_13-24 | 1.9733 | 0.1636 | 
| 13 | H1-N3_13-24 | 1.9711 | 0.0946 | 
| 13 | H21-O2_13-24 | 1.8989 | 0.1267 | 
| 14 | N1-H3_14-23 | 1.9907 | 0.1293 | 
| 14 | H61-O4_14-23 | 2.0098 | 0.2111 | 
| 15 | N1-H3_15-22 | 1.9816 | 0.1241 | 
| 15 | H61-O4_15-22 | 2.0327 | 0.2051 | 
| 16 | H3-N1_16-21 | 2.0062 | 0.2349 | 
| 16 | O4-H61_16-21 | 2.0495 | 0.3003 | 
| 17 | O6-H41_17-20 | 1.9788 | 0.1739 | 
| 17 | H1-N3_17-20 | 1.9748 | 0.0985 | 
| 17 | H21-O2_17-20 | 1.8995 | 0.1326 | 
| 18 | H41-O6_18-19 | 5.6708 | 4.5404 | 
| 18 | N3-H1_18-19 | 5.2486 | 4.0134 | 
| 18 | O2-H21_18-19 | 5.4031 | 4.2761 |