Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | A | - | C | - | T | - | A | - | A | - | C | - | T | - | A | - | A | - | C | - | T | - | A | - | A | - | C | - | G | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | T | - | G | - | A | - | T | - | T | - | G | - | A | - | T | - | T | - | G | - | A | - | T | - | T | - | G | - | C | - | G | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 2.090 | 0.834 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 2.033 | 0.929 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 2.110 | 1.042 | 
|  | Mean | Stdev | 
| 10_H61-27_O4-10 | 2.023 | 0.202 | 
|  | Mean | Stdev | 
| 10_N1-27_H3-10 | 1.967 | 0.118 | 
|  | Mean | Stdev | 
| 11_H61-26_O4-11 | 2.010 | 0.192 | 
|  | Mean | Stdev | 
| 11_N1-26_H3-11 | 1.971 | 0.115 | 
|  | Mean | Stdev | 
| 12_H41-25_O6-12 | 2.021 | 0.184 | 
|  | Mean | Stdev | 
| 12_N3-25_H1-12 | 1.971 | 0.098 | 
|  | Mean | Stdev | 
| 12_O2-25_H21-12 | 1.894 | 0.124 | 
|  | Mean | Stdev | 
| 13_H3-24_N1-13 | 1.960 | 0.128 | 
|  | Mean | Stdev | 
| 13_O4-24_H61-13 | 2.123 | 0.318 | 
|  | Mean | Stdev | 
| 14_H61-23_O4-14 | 2.017 | 0.201 | 
|  | Mean | Stdev | 
| 14_N1-23_H3-14 | 1.968 | 0.120 | 
|  | Mean | Stdev | 
| 15_H61-22_O4-15 | 2.001 | 0.199 | 
|  | Mean | Stdev | 
| 15_N1-22_H3-15 | 1.990 | 0.132 | 
|  | Mean | Stdev | 
| 16_H41-21_O6-16 | 1.999 | 0.186 | 
|  | Mean | Stdev | 
| 16_N3-21_H1-16 | 1.968 | 0.101 | 
|  | Mean | Stdev | 
| 16_O2-21_H21-16 | 1.888 | 0.120 | 
|  | Mean | Stdev | 
| 17_H1-20_N3-17 | 1.972 | 0.103 | 
|  | Mean | Stdev | 
| 17_H21-20_O2-17 | 1.897 | 0.129 | 
|  | Mean | Stdev | 
| 17_O6-20_H41-17 | 1.969 | 0.183 | 
|  | Mean | Stdev | 
| 18_H41-19_O6-18 | 4.244 | 4.796 | 
|  | Mean | Stdev | 
| 18_N3-19_H1-18 | 3.883 | 4.051 | 
|  | Mean | Stdev | 
| 18_O2-19_H21-18 | 3.797 | 3.948 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 1.960 | 0.158 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 1.977 | 0.098 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 1.903 | 0.125 | 
|  | Mean | Stdev | 
| 3_H61-34_O4-3 | 2.006 | 0.208 | 
|  | Mean | Stdev | 
| 3_N1-34_H3-3 | 1.963 | 0.116 | 
|  | Mean | Stdev | 
| 4_H41-33_O6-4 | 2.014 | 0.189 | 
|  | Mean | Stdev | 
| 4_N3-33_H1-4 | 1.975 | 0.102 | 
|  | Mean | Stdev | 
| 4_O2-33_H21-4 | 1.900 | 0.128 | 
|  | Mean | Stdev | 
| 5_H3-32_N1-5 | 1.962 | 0.121 | 
|  | Mean | Stdev | 
| 5_O4-32_H61-5 | 2.091 | 0.269 | 
|  | Mean | Stdev | 
| 6_H61-31_O4-6 | 2.025 | 0.223 | 
|  | Mean | Stdev | 
| 6_N1-31_H3-6 | 1.967 | 0.124 | 
|  | Mean | Stdev | 
| 7_H61-30_O4-7 | 2.016 | 0.197 | 
|  | Mean | Stdev | 
| 7_N1-30_H3-7 | 1.972 | 0.116 | 
|  | Mean | Stdev | 
| 8_H41-29_O6-8 | 2.025 | 0.190 | 
|  | Mean | Stdev | 
| 8_N3-29_H1-8 | 1.974 | 0.099 | 
|  | Mean | Stdev | 
| 8_O2-29_H21-8 | 1.902 | 0.129 | 
|  | Mean | Stdev | 
| 9_H3-28_N1-9 | 1.960 | 0.126 | 
|  | Mean | Stdev | 
| 9_O4-28_H61-9 | 2.119 | 0.313 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 2.1104 | 1.0416 | 
| 1 | H1-N3_1-36 | 2.0904 | 0.8338 | 
| 1 | H21-O2_1-36 | 2.0326 | 0.9289 | 
| 2 | H41-O6_2-35 | 1.9601 | 0.1575 | 
| 2 | N3-H1_2-35 | 1.9774 | 0.0976 | 
| 2 | O2-H21_2-35 | 1.9035 | 0.1246 | 
| 3 | N1-H3_3-34 | 1.9631 | 0.1158 | 
| 3 | H61-O4_3-34 | 2.0059 | 0.2078 | 
| 4 | H41-O6_4-33 | 2.0142 | 0.1890 | 
| 4 | N3-H1_4-33 | 1.9751 | 0.1016 | 
| 4 | O2-H21_4-33 | 1.8997 | 0.1282 | 
| 5 | H3-N1_5-32 | 1.9621 | 0.1207 | 
| 5 | O4-H61_5-32 | 2.0909 | 0.2689 | 
| 6 | N1-H3_6-31 | 1.9668 | 0.1241 | 
| 6 | H61-O4_6-31 | 2.0247 | 0.2233 | 
| 7 | N1-H3_7-30 | 1.9719 | 0.1157 | 
| 7 | H61-O4_7-30 | 2.0161 | 0.1972 | 
| 8 | H41-O6_8-29 | 2.0246 | 0.1897 | 
| 8 | N3-H1_8-29 | 1.9735 | 0.0991 | 
| 8 | O2-H21_8-29 | 1.9017 | 0.1287 | 
| 9 | H3-N1_9-28 | 1.9600 | 0.1258 | 
| 9 | O4-H61_9-28 | 2.1187 | 0.3134 | 
| 10 | N1-H3_10-27 | 1.9666 | 0.1180 | 
| 10 | H61-O4_10-27 | 2.0228 | 0.2017 | 
| 11 | N1-H3_11-26 | 1.9711 | 0.1147 | 
| 11 | H61-O4_11-26 | 2.0101 | 0.1924 | 
| 12 | H41-O6_12-25 | 2.0214 | 0.1841 | 
| 12 | N3-H1_12-25 | 1.9706 | 0.0980 | 
| 12 | O2-H21_12-25 | 1.8943 | 0.1237 | 
| 13 | H3-N1_13-24 | 1.9595 | 0.1279 | 
| 13 | O4-H61_13-24 | 2.1233 | 0.3179 | 
| 14 | N1-H3_14-23 | 1.9677 | 0.1196 | 
| 14 | H61-O4_14-23 | 2.0172 | 0.2012 | 
| 15 | N1-H3_15-22 | 1.9903 | 0.1318 | 
| 15 | H61-O4_15-22 | 2.0007 | 0.1986 | 
| 16 | H41-O6_16-21 | 1.9988 | 0.1856 | 
| 16 | N3-H1_16-21 | 1.9676 | 0.1013 | 
| 16 | O2-H21_16-21 | 1.8880 | 0.1205 | 
| 17 | O6-H41_17-20 | 1.9693 | 0.1835 | 
| 17 | H1-N3_17-20 | 1.9723 | 0.1032 | 
| 17 | H21-O2_17-20 | 1.8965 | 0.1288 | 
| 18 | H41-O6_18-19 | 4.2436 | 4.7956 | 
| 18 | N3-H1_18-19 | 3.8830 | 4.0507 | 
| 18 | O2-H21_18-19 | 3.7969 | 3.9478 |