Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | G | - | A | - | T | - | G | - | G | - | A | - | T | - | G | - | G | - | A | - | T | - | G | - | G | - | A | - | G | - | C | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | C | - | T | - | A | - | C | - | C | - | T | - | A | - | C | - | C | - | T | - | A | - | C | - | C | - | T | - | C | - | G | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 3.822 | 3.503 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 3.893 | 3.671 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 4.072 | 3.997 | 
|  | Mean | Stdev | 
| 10_H1-27_N3-10 | 1.966 | 0.099 | 
|  | Mean | Stdev | 
| 10_H21-27_O2-10 | 1.886 | 0.124 | 
|  | Mean | Stdev | 
| 10_O6-27_H41-10 | 1.971 | 0.180 | 
|  | Mean | Stdev | 
| 11_H1-26_N3-11 | 1.965 | 0.094 | 
|  | Mean | Stdev | 
| 11_H21-26_O2-11 | 1.920 | 0.137 | 
|  | Mean | Stdev | 
| 11_O6-26_H41-11 | 1.964 | 0.159 | 
|  | Mean | Stdev | 
| 12_H61-25_O4-12 | 2.041 | 0.208 | 
|  | Mean | Stdev | 
| 12_N1-25_H3-12 | 1.983 | 0.123 | 
|  | Mean | Stdev | 
| 13_H3-24_N1-13 | 1.984 | 0.124 | 
|  | Mean | Stdev | 
| 13_O4-24_H61-13 | 2.013 | 0.191 | 
|  | Mean | Stdev | 
| 14_H1-23_N3-14 | 1.967 | 0.094 | 
|  | Mean | Stdev | 
| 14_H21-23_O2-14 | 1.884 | 0.121 | 
|  | Mean | Stdev | 
| 14_O6-23_H41-14 | 1.972 | 0.167 | 
|  | Mean | Stdev | 
| 15_H1-22_N3-15 | 1.971 | 0.100 | 
|  | Mean | Stdev | 
| 15_H21-22_O2-15 | 1.926 | 0.142 | 
|  | Mean | Stdev | 
| 15_O6-22_H41-15 | 1.968 | 0.177 | 
|  | Mean | Stdev | 
| 16_H61-21_O4-16 | 2.042 | 0.226 | 
|  | Mean | Stdev | 
| 16_N1-21_H3-16 | 1.962 | 0.116 | 
|  | Mean | Stdev | 
| 17_H1-20_N3-17 | 2.033 | 0.762 | 
|  | Mean | Stdev | 
| 17_H21-20_O2-17 | 1.966 | 0.661 | 
|  | Mean | Stdev | 
| 17_O6-20_H41-17 | 2.042 | 0.971 | 
|  | Mean | Stdev | 
| 18_H41-19_O6-18 | 2.967 | 2.991 | 
|  | Mean | Stdev | 
| 18_N3-19_H1-18 | 2.723 | 2.452 | 
|  | Mean | Stdev | 
| 18_O2-19_H21-18 | 2.649 | 2.561 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 1.985 | 0.221 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 1.982 | 0.114 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 1.901 | 0.128 | 
|  | Mean | Stdev | 
| 3_H1-34_N3-3 | 1.969 | 0.098 | 
|  | Mean | Stdev | 
| 3_H21-34_O2-3 | 1.885 | 0.120 | 
|  | Mean | Stdev | 
| 3_O6-34_H41-3 | 1.966 | 0.175 | 
|  | Mean | Stdev | 
| 4_H61-33_O4-4 | 2.013 | 0.205 | 
|  | Mean | Stdev | 
| 4_N1-33_H3-4 | 1.992 | 0.145 | 
|  | Mean | Stdev | 
| 5_H3-32_N1-5 | 1.987 | 0.175 | 
|  | Mean | Stdev | 
| 5_O4-32_H61-5 | 2.039 | 0.253 | 
|  | Mean | Stdev | 
| 6_H1-31_N3-6 | 1.961 | 0.094 | 
|  | Mean | Stdev | 
| 6_H21-31_O2-6 | 1.884 | 0.120 | 
|  | Mean | Stdev | 
| 6_O6-31_H41-6 | 1.968 | 0.179 | 
|  | Mean | Stdev | 
| 7_H1-30_N3-7 | 1.965 | 0.093 | 
|  | Mean | Stdev | 
| 7_H21-30_O2-7 | 1.919 | 0.139 | 
|  | Mean | Stdev | 
| 7_O6-30_H41-7 | 1.962 | 0.160 | 
|  | Mean | Stdev | 
| 8_H61-29_O4-8 | 2.037 | 0.209 | 
|  | Mean | Stdev | 
| 8_N1-29_H3-8 | 1.980 | 0.121 | 
|  | Mean | Stdev | 
| 9_H3-28_N1-9 | 1.986 | 0.139 | 
|  | Mean | Stdev | 
| 9_O4-28_H61-9 | 2.027 | 0.214 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 4.0719 | 3.9971 | 
| 1 | H1-N3_1-36 | 3.8219 | 3.5028 | 
| 1 | H21-O2_1-36 | 3.8927 | 3.6711 | 
| 2 | H41-O6_2-35 | 1.9848 | 0.2211 | 
| 2 | N3-H1_2-35 | 1.9821 | 0.1136 | 
| 2 | O2-H21_2-35 | 1.9010 | 0.1284 | 
| 3 | O6-H41_3-34 | 1.9657 | 0.1753 | 
| 3 | H1-N3_3-34 | 1.9686 | 0.0980 | 
| 3 | H21-O2_3-34 | 1.8851 | 0.1202 | 
| 4 | N1-H3_4-33 | 1.9925 | 0.1453 | 
| 4 | H61-O4_4-33 | 2.0129 | 0.2051 | 
| 5 | H3-N1_5-32 | 1.9867 | 0.1753 | 
| 5 | O4-H61_5-32 | 2.0389 | 0.2533 | 
| 6 | O6-H41_6-31 | 1.9680 | 0.1789 | 
| 6 | H1-N3_6-31 | 1.9612 | 0.0941 | 
| 6 | H21-O2_6-31 | 1.8836 | 0.1203 | 
| 7 | O6-H41_7-30 | 1.9616 | 0.1597 | 
| 7 | H1-N3_7-30 | 1.9649 | 0.0931 | 
| 7 | H21-O2_7-30 | 1.9191 | 0.1385 | 
| 8 | N1-H3_8-29 | 1.9796 | 0.1209 | 
| 8 | H61-O4_8-29 | 2.0366 | 0.2090 | 
| 9 | H3-N1_9-28 | 1.9858 | 0.1388 | 
| 9 | O4-H61_9-28 | 2.0266 | 0.2139 | 
| 10 | O6-H41_10-27 | 1.9708 | 0.1798 | 
| 10 | H1-N3_10-27 | 1.9660 | 0.0993 | 
| 10 | H21-O2_10-27 | 1.8862 | 0.1236 | 
| 11 | O6-H41_11-26 | 1.9638 | 0.1587 | 
| 11 | H1-N3_11-26 | 1.9654 | 0.0944 | 
| 11 | H21-O2_11-26 | 1.9201 | 0.1373 | 
| 12 | N1-H3_12-25 | 1.9827 | 0.1227 | 
| 12 | H61-O4_12-25 | 2.0411 | 0.2084 | 
| 13 | H3-N1_13-24 | 1.9838 | 0.1241 | 
| 13 | O4-H61_13-24 | 2.0131 | 0.1913 | 
| 14 | O6-H41_14-23 | 1.9717 | 0.1670 | 
| 14 | H1-N3_14-23 | 1.9670 | 0.0942 | 
| 14 | H21-O2_14-23 | 1.8837 | 0.1212 | 
| 15 | O6-H41_15-22 | 1.9681 | 0.1775 | 
| 15 | H1-N3_15-22 | 1.9708 | 0.0998 | 
| 15 | H21-O2_15-22 | 1.9263 | 0.1423 | 
| 16 | N1-H3_16-21 | 1.9617 | 0.1161 | 
| 16 | H61-O4_16-21 | 2.0420 | 0.2264 | 
| 17 | O6-H41_17-20 | 2.0417 | 0.9706 | 
| 17 | H1-N3_17-20 | 2.0327 | 0.7623 | 
| 17 | H21-O2_17-20 | 1.9656 | 0.6609 | 
| 18 | H41-O6_18-19 | 2.9673 | 2.9908 | 
| 18 | N3-H1_18-19 | 2.7234 | 2.4517 | 
| 18 | O2-H21_18-19 | 2.6493 | 2.5614 |