Nucleic Acid Analysis - Hydrogen Bond Analysis 
	 Canonical Hydrogen Bond Distances
	
		
		
		
		
		
			|  | 1 |  | 2 |  | 3 |  | 4 |  | 5 |  | 6 |  | 7 |  | 8 |  | 9 |  | 10 |  | 11 |  | 12 |  | 13 |  | 14 |  | 15 |  | 16 |  | 17 |  | 18 |  | 
| 5' | G | - | C | - | C | - | U | - | A | - | U | - | A | - | A | - | A | - | C | - | G | - | C | - | C | - | U | - | A | - | U | - | A | - | A | 3' | 
|  | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | 
| 3' | C | - | G | - | G | - | A | - | U | - | A | - | U | - | U | - | U | - | G | - | C | - | G | - | G | - | A | - | U | - | A | - | U | - | U | 5' | 
|  | 36 |  | 35 |  | 34 |  | 33 |  | 32 |  | 31 |  | 30 |  | 29 |  | 28 |  | 27 |  | 26 |  | 25 |  | 24 |  | 23 |  | 22 |  | 21 |  | 20 |  | 19 |  | 
		
	 
        Interactive Sequence (see Help)
	
		
	
	
	
	
	
	
	
        
        
        
	
|  | Mean | Stdev | 
| 1_H1-36_N3-1 | 2.010 | 0.167 | 
|  | Mean | Stdev | 
| 1_H21-36_O2-1 | 1.927 | 0.215 | 
|  | Mean | Stdev | 
| 1_O6-36_H41-1 | 2.000 | 0.240 | 
|  | Mean | Stdev | 
| 10_H41-27_O6-10 | 2.020 | 0.276 | 
|  | Mean | Stdev | 
| 10_N3-27_H1-10 | 1.976 | 0.137 | 
|  | Mean | Stdev | 
| 10_O2-27_H21-10 | 1.882 | 0.125 | 
|  | Mean | Stdev | 
| 11_H1-26_N3-11 | 1.966 | 0.101 | 
|  | Mean | Stdev | 
| 11_H21-26_O2-11 | 1.885 | 0.120 | 
|  | Mean | Stdev | 
| 11_O6-26_H41-11 | 1.976 | 0.199 | 
|  | Mean | Stdev | 
| 12_H41-25_O6-12 | 1.984 | 0.174 | 
|  | Mean | Stdev | 
| 12_N3-25_H1-12 | 1.972 | 0.095 | 
|  | Mean | Stdev | 
| 12_O2-25_H21-12 | 1.880 | 0.116 | 
|  | Mean | Stdev | 
| 13_H41-24_O6-13 | 1.970 | 0.174 | 
|  | Mean | Stdev | 
| 13_N3-24_H1-13 | 1.966 | 0.097 | 
|  | Mean | Stdev | 
| 13_O2-24_H21-13 | 1.885 | 0.118 | 
|  | Mean | Stdev | 
| 14_H3-23_N1-14 | 1.969 | 0.118 | 
|  | Mean | Stdev | 
| 14_O4-23_H61-14 | 2.054 | 0.246 | 
|  | Mean | Stdev | 
| 15_H61-22_O4-15 | 2.146 | 0.418 | 
|  | Mean | Stdev | 
| 15_N1-22_H3-15 | 2.009 | 0.355 | 
|  | Mean | Stdev | 
| 16_H3-21_N1-16 | 1.982 | 0.130 | 
|  | Mean | Stdev | 
| 16_O4-21_H61-16 | 2.103 | 0.265 | 
|  | Mean | Stdev | 
| 17_H61-20_O4-17 | 2.080 | 0.257 | 
|  | Mean | Stdev | 
| 17_N1-20_H3-17 | 1.978 | 0.126 | 
|  | Mean | Stdev | 
| 18_H61-19_O4-18 | 2.279 | 1.152 | 
|  | Mean | Stdev | 
| 18_N1-19_H3-18 | 2.272 | 1.089 | 
|  | Mean | Stdev | 
| 2_H41-35_O6-2 | 1.982 | 0.168 | 
|  | Mean | Stdev | 
| 2_N3-35_H1-2 | 1.963 | 0.096 | 
|  | Mean | Stdev | 
| 2_O2-35_H21-2 | 1.873 | 0.114 | 
|  | Mean | Stdev | 
| 3_H41-34_O6-3 | 1.972 | 0.184 | 
|  | Mean | Stdev | 
| 3_N3-34_H1-3 | 1.963 | 0.097 | 
|  | Mean | Stdev | 
| 3_O2-34_H21-3 | 1.879 | 0.117 | 
|  | Mean | Stdev | 
| 4_H3-33_N1-4 | 1.971 | 0.116 | 
|  | Mean | Stdev | 
| 4_O4-33_H61-4 | 2.061 | 0.239 | 
|  | Mean | Stdev | 
| 5_H61-32_O4-5 | 2.097 | 0.249 | 
|  | Mean | Stdev | 
| 5_N1-32_H3-5 | 1.975 | 0.121 | 
|  | Mean | Stdev | 
| 6_H3-31_N1-6 | 1.997 | 0.294 | 
|  | Mean | Stdev | 
| 6_O4-31_H61-6 | 2.113 | 0.372 | 
|  | Mean | Stdev | 
| 7_H61-30_O4-7 | 2.044 | 0.221 | 
|  | Mean | Stdev | 
| 7_N1-30_H3-7 | 1.988 | 0.127 | 
|  | Mean | Stdev | 
| 8_H61-29_O4-8 | 2.040 | 0.230 | 
|  | Mean | Stdev | 
| 8_N1-29_H3-8 | 2.002 | 0.135 | 
|  | Mean | Stdev | 
| 9_H61-28_O4-9 | 2.048 | 0.325 | 
|  | Mean | Stdev | 
| 9_N1-28_H3-9 | 2.011 | 0.187 | 
| Nucleotide Number | Hydrogen Bond | Mean | Stdev | 
| 1 | O6-H41_1-36 | 1.9996 | 0.2403 | 
| 1 | H1-N3_1-36 | 2.0099 | 0.1674 | 
| 1 | H21-O2_1-36 | 1.9275 | 0.2151 | 
| 2 | H41-O6_2-35 | 1.9821 | 0.1683 | 
| 2 | N3-H1_2-35 | 1.9632 | 0.0959 | 
| 2 | O2-H21_2-35 | 1.8725 | 0.1139 | 
| 3 | H41-O6_3-34 | 1.9719 | 0.1842 | 
| 3 | N3-H1_3-34 | 1.9631 | 0.0965 | 
| 3 | O2-H21_3-34 | 1.8789 | 0.1165 | 
| 4 | H3-N1_4-33 | 1.9710 | 0.1160 | 
| 4 | O4-H61_4-33 | 2.0605 | 0.2387 | 
| 5 | N1-H3_5-32 | 1.9747 | 0.1206 | 
| 5 | H61-O4_5-32 | 2.0970 | 0.2494 | 
| 6 | H3-N1_6-31 | 1.9967 | 0.2940 | 
| 6 | O4-H61_6-31 | 2.1126 | 0.3722 | 
| 7 | N1-H3_7-30 | 1.9877 | 0.1265 | 
| 7 | H61-O4_7-30 | 2.0442 | 0.2206 | 
| 8 | N1-H3_8-29 | 2.0021 | 0.1345 | 
| 8 | H61-O4_8-29 | 2.0396 | 0.2299 | 
| 9 | N1-H3_9-28 | 2.0114 | 0.1871 | 
| 9 | H61-O4_9-28 | 2.0480 | 0.3252 | 
| 10 | H41-O6_10-27 | 2.0196 | 0.2760 | 
| 10 | N3-H1_10-27 | 1.9760 | 0.1370 | 
| 10 | O2-H21_10-27 | 1.8824 | 0.1247 | 
| 11 | O6-H41_11-26 | 1.9756 | 0.1990 | 
| 11 | H1-N3_11-26 | 1.9660 | 0.1010 | 
| 11 | H21-O2_11-26 | 1.8848 | 0.1197 | 
| 12 | H41-O6_12-25 | 1.9841 | 0.1736 | 
| 12 | N3-H1_12-25 | 1.9721 | 0.0946 | 
| 12 | O2-H21_12-25 | 1.8800 | 0.1155 | 
| 13 | H41-O6_13-24 | 1.9702 | 0.1744 | 
| 13 | N3-H1_13-24 | 1.9659 | 0.0969 | 
| 13 | O2-H21_13-24 | 1.8845 | 0.1178 | 
| 14 | H3-N1_14-23 | 1.9690 | 0.1185 | 
| 14 | O4-H61_14-23 | 2.0542 | 0.2461 | 
| 15 | N1-H3_15-22 | 2.0090 | 0.3550 | 
| 15 | H61-O4_15-22 | 2.1458 | 0.4185 | 
| 16 | H3-N1_16-21 | 1.9819 | 0.1304 | 
| 16 | O4-H61_16-21 | 2.1029 | 0.2654 | 
| 17 | N1-H3_17-20 | 1.9783 | 0.1258 | 
| 17 | H61-O4_17-20 | 2.0799 | 0.2565 | 
| 18 | N1-H3_18-19 | 2.2723 | 1.0886 | 
| 18 | H61-O4_18-19 | 2.2785 | 1.1521 |