Nucleic Acid Analysis - Helical Parameters
(Using Curves+ and Canal programs)
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | |||||||||
5' | C | - | C | - | C | - | C | - | G | - | G | - | G | - | G | 3' |
| | x | | | x | | | x | | | x | | | x | | | ||||||
3' | G | - | G | - | G | - | G | - | C | - | C | - | C | - | C | 5' |
16 | 15 | 14 | 13 | 12 | 11 | 10 | 9 |
Interactive Sequence (see Help)
[Image courtesy of Neidle, S. (2007). Principles of nucleic acid structure.] |
[Image courtesy of Neidle, S. (2007). Principles of nucleic acid structure.] [Image courtesy of Neidle, S. (2007). Principles of nucleic acid structure.] |
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Mean | Stdev | |
inclin-2-CG | 3.536 | 9.271 |
Mean | Stdev | |
tip-2-CG | -18.773 | 56.186 |
Mean | Stdev | |
xdisp-2-CG | -1.094 | 1.241 |
Mean | Stdev | |
ydisp-2-CG | 0.013 | 0.698 |
Mean | Stdev | |
inclin-3-CG | 6.984 | 5.944 |
Mean | Stdev | |
tip-3-CG | 0.237 | 4.761 |
Mean | Stdev | |
xdisp-3-CG | -1.206 | 1.068 |
Mean | Stdev | |
ydisp-3-CG | -0.501 | 0.671 |
Mean | Stdev | |
inclin-4-CG | 5.325 | 5.774 |
Mean | Stdev | |
tip-4-CG | -2.359 | 4.855 |
Mean | Stdev | |
xdisp-4-CG | -1.673 | 0.981 |
Mean | Stdev | |
ydisp-4-CG | -0.425 | 0.697 |
Mean | Stdev | |
inclin-5-GC | 6.228 | 5.304 |
Mean | Stdev | |
tip-5-GC | -0.143 | 4.687 |
Mean | Stdev | |
xdisp-5-GC | -1.431 | 1.082 |
Mean | Stdev | |
ydisp-5-GC | 0.067 | 0.607 |
Mean | Stdev | |
inclin-6-GC | 4.921 | 5.318 |
Mean | Stdev | |
tip-6-GC | -1.566 | 4.458 |
Mean | Stdev | |
xdisp-6-GC | -1.482 | 0.857 |
Mean | Stdev | |
ydisp-6-GC | -0.359 | 0.740 |
Mean | Stdev | |
inclin-7-GC | 6.630 | 5.758 |
Mean | Stdev | |
tip-7-GC | -1.542 | 4.606 |
Mean | Stdev | |
xdisp-7-GC | -1.993 | 1.101 |
Mean | Stdev | |
ydisp-7-GC | -0.613 | 0.748 |
Mean | Stdev | |
alpha-1-C | 0.000 | 0.000 |
Mean | Stdev | |
beta-1-C | 0.000 | 0.000 |
Mean | Stdev | |
chi-1-C | 231.682 | 18.873 |
Mean | Stdev | |
diff-1-C | -53.487 | 62.566 |
Mean | Stdev | |
epsil-1-C | 200.682 | 20.347 |
Mean | Stdev | |
gamma-1-C | 108.248 | 91.161 |
Mean | Stdev | |
phase-1-C | 150.442 | 35.193 |
Mean | Stdev | |
zeta-1-C | 254.169 | 53.269 |
Mean | Stdev | |
alpha-10-C | 283.970 | 23.315 |
Mean | Stdev | |
beta-10-C | 175.920 | 13.804 |
Mean | Stdev | |
chi-10-C | 240.899 | 14.706 |
Mean | Stdev | |
diff-10-C | -63.311 | 45.555 |
Mean | Stdev | |
epsil-10-C | 191.451 | 19.411 |
Mean | Stdev | |
gamma-10-C | 56.430 | 18.284 |
Mean | Stdev | |
phase-10-C | 147.887 | 21.171 |
Mean | Stdev | |
zeta-10-C | 254.762 | 28.401 |
Mean | Stdev | |
alpha-11-C | 288.575 | 10.906 |
Mean | Stdev | |
beta-11-C | 177.023 | 14.985 |
Mean | Stdev | |
chi-11-C | 238.622 | 15.628 |
Mean | Stdev | |
diff-11-C | -62.568 | 46.622 |
Mean | Stdev | |
epsil-11-C | 196.325 | 19.296 |
Mean | Stdev | |
gamma-11-C | 53.677 | 10.560 |
Mean | Stdev | |
phase-11-C | 142.556 | 28.810 |
Mean | Stdev | |
zeta-11-C | 258.893 | 30.459 |
Mean | Stdev | |
alpha-12-C | 283.509 | 18.853 |
Mean | Stdev | |
beta-12-C | 167.096 | 29.783 |
Mean | Stdev | |
chi-12-C | 243.247 | 20.220 |
Mean | Stdev | |
diff-12-C | -21.882 | 69.894 |
Mean | Stdev | |
epsil-12-C | 213.975 | 25.725 |
Mean | Stdev | |
gamma-12-C | 60.762 | 33.736 |
Mean | Stdev | |
phase-12-C | 137.405 | 35.283 |
Mean | Stdev | |
zeta-12-C | 235.857 | 47.667 |
Mean | Stdev | |
alpha-13-G | 282.628 | 14.736 |
Mean | Stdev | |
beta-13-G | 163.830 | 14.347 |
Mean | Stdev | |
chi-13-G | 258.000 | 16.017 |
Mean | Stdev | |
diff-13-G | -16.195 | 77.764 |
Mean | Stdev | |
epsil-13-G | 211.099 | 30.743 |
Mean | Stdev | |
gamma-13-G | 52.159 | 11.960 |
Mean | Stdev | |
phase-13-G | 160.494 | 25.490 |
Mean | Stdev | |
zeta-13-G | 227.294 | 49.105 |
Mean | Stdev | |
alpha-14-G | 285.750 | 16.000 |
Mean | Stdev | |
beta-14-G | 162.002 | 16.992 |
Mean | Stdev | |
chi-14-G | 248.187 | 17.580 |
Mean | Stdev | |
diff-14-G | -36.745 | 68.351 |
Mean | Stdev | |
epsil-14-G | 201.574 | 27.874 |
Mean | Stdev | |
gamma-14-G | 52.476 | 14.014 |
Mean | Stdev | |
phase-14-G | 154.031 | 32.333 |
Mean | Stdev | |
zeta-14-G | 238.319 | 42.593 |
Mean | Stdev | |
alpha-15-G | 284.571 | 30.523 |
Mean | Stdev | |
beta-15-G | 168.744 | 19.615 |
Mean | Stdev | |
chi-15-G | 241.026 | 14.950 |
Mean | Stdev | |
diff-15-G | -71.824 | 40.558 |
Mean | Stdev | |
epsil-15-G | 188.307 | 18.215 |
Mean | Stdev | |
gamma-15-G | 57.235 | 27.773 |
Mean | Stdev | |
phase-15-G | 155.824 | 22.312 |
Mean | Stdev | |
zeta-15-G | 260.131 | 24.983 |
Mean | Stdev | |
alpha-16-G | 286.898 | 22.426 |
Mean | Stdev | |
beta-16-G | 179.234 | 15.400 |
Mean | Stdev | |
chi-16-G | 241.819 | 15.494 |
Mean | Stdev | |
diff-16-G | 0.000 | 0.000 |
Mean | Stdev | |
epsil-16-G | 0.000 | 0.000 |
Mean | Stdev | |
gamma-16-G | 53.569 | 22.602 |
Mean | Stdev | |
phase-16-G | 147.423 | 24.920 |
Mean | Stdev | |
zeta-16-G | 0.000 | 0.000 |
Mean | Stdev | |
alpha-2-C | 263.568 | 60.769 |
Mean | Stdev | |
beta-2-C | 177.489 | 14.266 |
Mean | Stdev | |
chi-2-C | 239.038 | 15.976 |
Mean | Stdev | |
diff-2-C | -65.910 | 42.434 |
Mean | Stdev | |
epsil-2-C | 193.010 | 18.055 |
Mean | Stdev | |
gamma-2-C | 57.971 | 24.768 |
Mean | Stdev | |
phase-2-C | 149.817 | 23.444 |
Mean | Stdev | |
zeta-2-C | 258.920 | 27.624 |
Mean | Stdev | |
alpha-3-C | 286.167 | 19.651 |
Mean | Stdev | |
beta-3-C | 174.862 | 15.215 |
Mean | Stdev | |
chi-3-C | 243.565 | 16.476 |
Mean | Stdev | |
diff-3-C | -36.415 | 68.936 |
Mean | Stdev | |
epsil-3-C | 203.064 | 27.933 |
Mean | Stdev | |
gamma-3-C | 54.666 | 18.355 |
Mean | Stdev | |
phase-3-C | 145.285 | 23.014 |
Mean | Stdev | |
zeta-3-C | 239.479 | 43.123 |
Mean | Stdev | |
alpha-4-C | 284.006 | 31.988 |
Mean | Stdev | |
beta-4-C | 166.330 | 26.524 |
Mean | Stdev | |
chi-4-C | 241.495 | 16.073 |
Mean | Stdev | |
diff-4-C | -64.842 | 42.866 |
Mean | Stdev | |
epsil-4-C | 198.983 | 17.301 |
Mean | Stdev | |
gamma-4-C | 61.890 | 35.577 |
Mean | Stdev | |
phase-4-C | 146.547 | 31.580 |
Mean | Stdev | |
zeta-4-C | 263.825 | 29.019 |
Mean | Stdev | |
alpha-5-G | 282.905 | 13.132 |
Mean | Stdev | |
beta-5-G | 169.969 | 11.711 |
Mean | Stdev | |
chi-5-G | 263.880 | 13.135 |
Mean | Stdev | |
diff-5-G | -31.811 | 71.885 |
Mean | Stdev | |
epsil-5-G | 211.371 | 25.911 |
Mean | Stdev | |
gamma-5-G | 50.844 | 10.122 |
Mean | Stdev | |
phase-5-G | 149.713 | 19.707 |
Mean | Stdev | |
zeta-5-G | 243.182 | 48.909 |
Mean | Stdev | |
alpha-6-G | 266.369 | 41.310 |
Mean | Stdev | |
beta-6-G | 108.771 | 52.274 |
Mean | Stdev | |
chi-6-G | 216.657 | 29.430 |
Mean | Stdev | |
diff-6-G | -68.880 | 38.495 |
Mean | Stdev | |
epsil-6-G | 203.300 | 17.886 |
Mean | Stdev | |
gamma-6-G | 125.963 | 62.485 |
Mean | Stdev | |
phase-6-G | 149.553 | 66.811 |
Mean | Stdev | |
zeta-6-G | 272.180 | 28.120 |
Mean | Stdev | |
alpha-7-G | 246.325 | 74.433 |
Mean | Stdev | |
beta-7-G | 175.652 | 13.542 |
Mean | Stdev | |
chi-7-G | 241.236 | 17.530 |
Mean | Stdev | |
diff-7-G | -66.234 | 44.876 |
Mean | Stdev | |
epsil-7-G | 191.645 | 19.624 |
Mean | Stdev | |
gamma-7-G | 82.538 | 54.443 |
Mean | Stdev | |
phase-7-G | 153.680 | 22.107 |
Mean | Stdev | |
zeta-7-G | 257.878 | 28.510 |
Mean | Stdev | |
alpha-8-G | 283.808 | 28.051 |
Mean | Stdev | |
beta-8-G | 167.563 | 38.069 |
Mean | Stdev | |
chi-8-G | 235.466 | 19.804 |
Mean | Stdev | |
diff-8-G | 0.000 | 0.000 |
Mean | Stdev | |
epsil-8-G | 0.000 | 0.000 |
Mean | Stdev | |
gamma-8-G | 67.438 | 47.710 |
Mean | Stdev | |
phase-8-G | 150.085 | 23.134 |
Mean | Stdev | |
zeta-8-G | 0.000 | 0.000 |
Mean | Stdev | |
alpha-9-C | 0.000 | 0.000 |
Mean | Stdev | |
beta-9-C | 0.000 | 0.000 |
Mean | Stdev | |
chi-9-C | 231.474 | 19.603 |
Mean | Stdev | |
diff-9-C | -67.329 | 37.940 |
Mean | Stdev | |
epsil-9-C | 196.700 | 16.657 |
Mean | Stdev | |
gamma-9-C | 109.027 | 91.690 |
Mean | Stdev | |
phase-9-C | 141.828 | 46.079 |
Mean | Stdev | |
zeta-9-C | 264.028 | 26.736 |
Mean | Stdev | |
majd-2-CCGG | 0.000 | 0.000 |
Mean | Stdev | |
majw-2-CCGG | 0.000 | 0.000 |
Mean | Stdev | |
mind-2-CCGG | 0.000 | 0.000 |
Mean | Stdev | |
minw-2-CCGG | 0.000 | 0.000 |
Mean | Stdev | |
majd-3-CCGG | 0.215 | 1.215 |
Mean | Stdev | |
majw-3-CCGG | 14.130 | 1.697 |
Mean | Stdev | |
mind-3-CCGG | 4.472 | 0.764 |
Mean | Stdev | |
minw-3-CCGG | 6.081 | 1.469 |
Mean | Stdev | |
majd-4-CGCG | 3.702 | 2.004 |
Mean | Stdev | |
majw-4-CGCG | 12.920 | 1.596 |
Mean | Stdev | |
mind-4-CGCG | 4.043 | 0.934 |
Mean | Stdev | |
minw-4-CGCG | 8.042 | 1.150 |
Mean | Stdev | |
majd-5-GGCC | 2.938 | 1.626 |
Mean | Stdev | |
majw-5-GGCC | 13.332 | 1.715 |
Mean | Stdev | |
mind-5-GGCC | 4.427 | 1.094 |
Mean | Stdev | |
minw-5-GGCC | 7.415 | 1.538 |
Mean | Stdev | |
majd-6-GGCC | -0.464 | 1.293 |
Mean | Stdev | |
majw-6-GGCC | 12.684 | 3.031 |
Mean | Stdev | |
mind-6-GGCC | 4.287 | 0.666 |
Mean | Stdev | |
minw-6-GGCC | 6.157 | 1.524 |
Mean | Stdev | |
buckle-2-CG | -2.157 | 12.274 |
Mean | Stdev | |
opening-2-CG | 1.453 | 3.508 |
Mean | Stdev | |
propel-2-CG | -8.491 | 9.490 |
Mean | Stdev | |
shear-2-CG | 0.028 | 0.317 |
Mean | Stdev | |
stagger-2-CG | -0.101 | 0.454 |
Mean | Stdev | |
stretch-2-CG | 0.013 | 0.117 |
Mean | Stdev | |
buckle-3-CG | -9.225 | 9.408 |
Mean | Stdev | |
opening-3-CG | 0.848 | 3.123 |
Mean | Stdev | |
propel-3-CG | -4.392 | 8.661 |
Mean | Stdev | |
shear-3-CG | -0.005 | 0.313 |
Mean | Stdev | |
stagger-3-CG | 0.041 | 0.405 |
Mean | Stdev | |
stretch-3-CG | 0.025 | 0.110 |
Mean | Stdev | |
buckle-4-CG | -9.609 | 9.103 |
Mean | Stdev | |
opening-4-CG | 1.197 | 3.253 |
Mean | Stdev | |
propel-4-CG | -2.599 | 8.513 |
Mean | Stdev | |
shear-4-CG | -0.062 | 0.310 |
Mean | Stdev | |
stagger-4-CG | 0.188 | 0.362 |
Mean | Stdev | |
stretch-4-CG | 0.041 | 0.108 |
Mean | Stdev | |
buckle-5-GC | 5.797 | 9.235 |
Mean | Stdev | |
opening-5-GC | 1.108 | 3.152 |
Mean | Stdev | |
propel-5-GC | 0.571 | 8.601 |
Mean | Stdev | |
shear-5-GC | 0.051 | 0.312 |
Mean | Stdev | |
stagger-5-GC | 0.066 | 0.398 |
Mean | Stdev | |
stretch-5-GC | 0.037 | 0.107 |
Mean | Stdev | |
buckle-6-GC | 6.305 | 9.132 |
Mean | Stdev | |
opening-6-GC | 0.659 | 3.278 |
Mean | Stdev | |
propel-6-GC | -6.866 | 8.528 |
Mean | Stdev | |
shear-6-GC | 0.008 | 0.325 |
Mean | Stdev | |
stagger-6-GC | 0.107 | 0.402 |
Mean | Stdev | |
stretch-6-GC | 0.022 | 0.114 |
Mean | Stdev | |
buckle-7-GC | -0.803 | 11.491 |
Mean | Stdev | |
opening-7-GC | 1.447 | 3.533 |
Mean | Stdev | |
propel-7-GC | -7.570 | 9.157 |
Mean | Stdev | |
shear-7-GC | -0.061 | 0.319 |
Mean | Stdev | |
stagger-7-GC | -0.203 | 0.432 |
Mean | Stdev | |
stretch-7-GC | -0.004 | 0.118 |
Mean | Stdev | |
rise-2-CCGG | 3.533 | 0.352 |
Mean | Stdev | |
roll-2-CCGG | 3.154 | 5.573 |
Mean | Stdev | |
shift-2-CCGG | 0.109 | 0.773 |
Mean | Stdev | |
slide-2-CCGG | -0.720 | 0.798 |
Mean | Stdev | |
tilt-2-CCGG | -0.116 | 4.652 |
Mean | Stdev | |
twist-2-CCGG | 34.082 | 4.727 |
Mean | Stdev | |
rise-3-CCGG | 3.403 | 0.293 |
Mean | Stdev | |
roll-3-CCGG | 1.221 | 5.866 |
Mean | Stdev | |
shift-3-CCGG | -0.109 | 1.003 |
Mean | Stdev | |
slide-3-CCGG | -0.263 | 0.718 |
Mean | Stdev | |
tilt-3-CCGG | -0.537 | 4.626 |
Mean | Stdev | |
twist-3-CCGG | 34.830 | 5.356 |
Mean | Stdev | |
rise-4-CGCG | 2.986 | 0.319 |
Mean | Stdev | |
roll-4-CGCG | 4.949 | 6.596 |
Mean | Stdev | |
shift-4-CGCG | 0.458 | 0.907 |
Mean | Stdev | |
slide-4-CGCG | 0.075 | 0.553 |
Mean | Stdev | |
tilt-4-CGCG | 1.762 | 5.364 |
Mean | Stdev | |
twist-4-CGCG | 30.812 | 7.390 |
Mean | Stdev | |
rise-5-GGCC | 3.388 | 0.312 |
Mean | Stdev | |
roll-5-GGCC | 1.058 | 6.077 |
Mean | Stdev | |
shift-5-GGCC | 0.209 | 1.005 |
Mean | Stdev | |
slide-5-GGCC | -0.707 | 0.816 |
Mean | Stdev | |
tilt-5-GGCC | -0.831 | 4.611 |
Mean | Stdev | |
twist-5-GGCC | 28.839 | 7.231 |
Mean | Stdev | |
rise-6-GGCC | 3.542 | 0.348 |
Mean | Stdev | |
roll-6-GGCC | 3.421 | 5.553 |
Mean | Stdev | |
shift-6-GGCC | 0.081 | 0.678 |
Mean | Stdev | |
slide-6-GGCC | -0.994 | 0.711 |
Mean | Stdev | |
tilt-6-GGCC | 2.621 | 4.348 |
Mean | Stdev | |
twist-6-GGCC | 34.357 | 4.797 |