Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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A |
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A |
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A |
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A |
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A |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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C |
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G |
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C |
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T |
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T |
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T |
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T |
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T |
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T |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 4.794 | 3.268 |
| Mean | Stdev |
1_N3-24_H1-1 | 4.590 | 3.096 |
| Mean | Stdev |
1_O2-24_H21-1 | 4.540 | 3.145 |
| Mean | Stdev |
10_H61-15_O4-10 | 2.001 | 0.190 |
| Mean | Stdev |
10_N1-15_H3-10 | 1.968 | 0.120 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.976 | 0.170 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.966 | 0.098 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.888 | 0.125 |
| Mean | Stdev |
12_H1-13_N3-12 | 2.553 | 1.997 |
| Mean | Stdev |
12_H21-13_O2-12 | 2.404 | 1.711 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.754 | 2.516 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.976 | 0.097 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.905 | 0.140 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.953 | 0.158 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.952 | 0.154 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.980 | 0.096 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.908 | 0.130 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.969 | 0.094 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.884 | 0.123 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.961 | 0.161 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.984 | 0.184 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.996 | 0.130 |
| Mean | Stdev |
6_H61-19_O4-6 | 1.996 | 0.184 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.980 | 0.126 |
| Mean | Stdev |
7_H61-18_O4-7 | 2.003 | 0.190 |
| Mean | Stdev |
7_N1-18_H3-7 | 1.975 | 0.122 |
| Mean | Stdev |
8_H61-17_O4-8 | 2.076 | 0.521 |
| Mean | Stdev |
8_N1-17_H3-8 | 2.039 | 0.484 |
| Mean | Stdev |
9_H61-16_O4-9 | 1.994 | 0.181 |
| Mean | Stdev |
9_N1-16_H3-9 | 1.980 | 0.122 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 4.7938 | 3.2676 |
1 | N3-H1_1-24 | 4.5899 | 3.0964 |
1 | O2-H21_1-24 | 4.5400 | 3.1448 |
2 | O6-H41_2-23 | 1.9534 | 0.1576 |
2 | H1-N3_2-23 | 1.9756 | 0.0972 |
2 | H21-O2_2-23 | 1.9054 | 0.1399 |
3 | H41-O6_3-22 | 1.9522 | 0.1543 |
3 | N3-H1_3-22 | 1.9800 | 0.0958 |
3 | O2-H21_3-22 | 1.9084 | 0.1300 |
4 | O6-H41_4-21 | 1.9607 | 0.1609 |
4 | H1-N3_4-21 | 1.9693 | 0.0942 |
4 | H21-O2_4-21 | 1.8836 | 0.1231 |
5 | N1-H3_5-20 | 1.9963 | 0.1296 |
5 | H61-O4_5-20 | 1.9843 | 0.1839 |
6 | N1-H3_6-19 | 1.9800 | 0.1264 |
6 | H61-O4_6-19 | 1.9964 | 0.1844 |
7 | N1-H3_7-18 | 1.9748 | 0.1220 |
7 | H61-O4_7-18 | 2.0027 | 0.1896 |
8 | N1-H3_8-17 | 2.0394 | 0.4841 |
8 | H61-O4_8-17 | 2.0758 | 0.5214 |
9 | N1-H3_9-16 | 1.9795 | 0.1224 |
9 | H61-O4_9-16 | 1.9942 | 0.1806 |
10 | N1-H3_10-15 | 1.9679 | 0.1198 |
10 | H61-O4_10-15 | 2.0011 | 0.1896 |
11 | H41-O6_11-14 | 1.9758 | 0.1695 |
11 | N3-H1_11-14 | 1.9662 | 0.0976 |
11 | O2-H21_11-14 | 1.8880 | 0.1250 |
12 | O6-H41_12-13 | 2.7543 | 2.5160 |
12 | H1-N3_12-13 | 2.5525 | 1.9972 |
12 | H21-O2_12-13 | 2.4037 | 1.7112 |