Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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2 |
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3 |
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4 |
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5 |
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8 |
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9 |
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10 |
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11 |
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12 |
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14 |
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C |
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G |
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C |
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A |
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C |
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A |
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C |
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C |
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C |
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C |
3' |
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| 3' |
G |
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A |
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C |
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T |
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T |
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G |
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T |
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T |
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A |
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G |
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T |
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G |
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G |
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5' |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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21 |
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18 |
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Interactive Sequence (see Help)
| Mean | Stdev |
| 1_H41-30_O6-1 | 2.364 | 1.509 |
| Mean | Stdev |
| 1_N3-30_H1-1 | 2.297 | 1.370 |
| Mean | Stdev |
| 1_O2-30_H21-1 | 2.250 | 1.350 |
| Mean | Stdev |
| 10_H41-21_O6-10 | 1.977 | 0.163 |
| Mean | Stdev |
| 10_N3-21_H1-10 | 1.971 | 0.095 |
| Mean | Stdev |
| 10_O2-21_H21-10 | 1.884 | 0.121 |
| Mean | Stdev |
| 11_H61-20_O4-11 | 1.967 | 0.179 |
| Mean | Stdev |
| 11_N1-20_H3-11 | 1.977 | 0.121 |
| Mean | Stdev |
| 12_H41-19_O6-12 | 1.975 | 0.159 |
| Mean | Stdev |
| 12_N3-19_H1-12 | 1.974 | 0.096 |
| Mean | Stdev |
| 12_O2-19_H21-12 | 1.887 | 0.117 |
| Mean | Stdev |
| 13_H41-18_O6-13 | 1.957 | 0.167 |
| Mean | Stdev |
| 13_N3-18_H1-13 | 1.953 | 0.092 |
| Mean | Stdev |
| 13_O2-18_H21-13 | 1.896 | 0.124 |
| Mean | Stdev |
| 14_H41-17_O6-14 | 1.969 | 0.168 |
| Mean | Stdev |
| 14_N3-17_H1-14 | 1.967 | 0.097 |
| Mean | Stdev |
| 14_O2-17_H21-14 | 1.895 | 0.126 |
| Mean | Stdev |
| 15_H41-16_O6-15 | 2.041 | 0.409 |
| Mean | Stdev |
| 15_N3-16_H1-15 | 2.014 | 0.202 |
| Mean | Stdev |
| 15_O2-16_H21-15 | 1.914 | 0.169 |
| Mean | Stdev |
| 2_H3-29_N1-2 | 1.966 | 0.125 |
| Mean | Stdev |
| 2_O4-29_H61-2 | 2.002 | 0.198 |
| Mean | Stdev |
| 3_H1-28_N3-3 | 1.976 | 0.094 |
| Mean | Stdev |
| 3_H21-28_O2-3 | 1.890 | 0.124 |
| Mean | Stdev |
| 3_O6-28_H41-3 | 1.966 | 0.159 |
| Mean | Stdev |
| 4_H61-27_O4-4 | 1.976 | 0.169 |
| Mean | Stdev |
| 4_N1-27_H3-4 | 1.985 | 0.124 |
| Mean | Stdev |
| 5_H61-26_O4-5 | 1.972 | 0.169 |
| Mean | Stdev |
| 5_N1-26_H3-5 | 1.978 | 0.124 |
| Mean | Stdev |
| 6_H41-25_O6-6 | 1.998 | 0.180 |
| Mean | Stdev |
| 6_N3-25_H1-6 | 1.981 | 0.103 |
| Mean | Stdev |
| 6_O2-25_H21-6 | 1.890 | 0.122 |
| Mean | Stdev |
| 7_H61-24_O4-7 | 1.996 | 0.184 |
| Mean | Stdev |
| 7_N1-24_H3-7 | 1.960 | 0.114 |
| Mean | Stdev |
| 8_H61-23_O4-8 | 2.000 | 0.176 |
| Mean | Stdev |
| 8_N1-23_H3-8 | 1.988 | 0.121 |
| Mean | Stdev |
| 9_H3-22_N1-9 | 1.999 | 0.126 |
| Mean | Stdev |
| 9_O4-22_H61-9 | 1.984 | 0.174 |
| Nucleotide Number | Hydrogen Bond | Mean | Stdev |
| 1 | H41-O6_1-30 | 2.3636 | 1.5087 |
| 1 | N3-H1_1-30 | 2.2970 | 1.3704 |
| 1 | O2-H21_1-30 | 2.2496 | 1.3503 |
| 2 | H3-N1_2-29 | 1.9657 | 0.1247 |
| 2 | O4-H61_2-29 | 2.0024 | 0.1983 |
| 3 | O6-H41_3-28 | 1.9664 | 0.1586 |
| 3 | H1-N3_3-28 | 1.9756 | 0.0943 |
| 3 | H21-O2_3-28 | 1.8902 | 0.1240 |
| 4 | N1-H3_4-27 | 1.9854 | 0.1245 |
| 4 | H61-O4_4-27 | 1.9757 | 0.1691 |
| 5 | N1-H3_5-26 | 1.9777 | 0.1241 |
| 5 | H61-O4_5-26 | 1.9721 | 0.1688 |
| 6 | H41-O6_6-25 | 1.9985 | 0.1800 |
| 6 | N3-H1_6-25 | 1.9808 | 0.1029 |
| 6 | O2-H21_6-25 | 1.8900 | 0.1222 |
| 7 | N1-H3_7-24 | 1.9605 | 0.1142 |
| 7 | H61-O4_7-24 | 1.9957 | 0.1844 |
| 8 | N1-H3_8-23 | 1.9876 | 0.1210 |
| 8 | H61-O4_8-23 | 2.0004 | 0.1765 |
| 9 | H3-N1_9-22 | 1.9989 | 0.1261 |
| 9 | O4-H61_9-22 | 1.9841 | 0.1736 |
| 10 | H41-O6_10-21 | 1.9770 | 0.1630 |
| 10 | N3-H1_10-21 | 1.9708 | 0.0953 |
| 10 | O2-H21_10-21 | 1.8842 | 0.1210 |
| 11 | N1-H3_11-20 | 1.9768 | 0.1214 |
| 11 | H61-O4_11-20 | 1.9674 | 0.1795 |
| 12 | H41-O6_12-19 | 1.9753 | 0.1585 |
| 12 | N3-H1_12-19 | 1.9743 | 0.0962 |
| 12 | O2-H21_12-19 | 1.8875 | 0.1171 |
| 13 | H41-O6_13-18 | 1.9568 | 0.1667 |
| 13 | N3-H1_13-18 | 1.9531 | 0.0917 |
| 13 | O2-H21_13-18 | 1.8959 | 0.1241 |
| 14 | H41-O6_14-17 | 1.9687 | 0.1678 |
| 14 | N3-H1_14-17 | 1.9673 | 0.0967 |
| 14 | O2-H21_14-17 | 1.8953 | 0.1255 |
| 15 | H41-O6_15-16 | 2.0413 | 0.4094 |
| 15 | N3-H1_15-16 | 2.0145 | 0.2020 |
| 15 | O2-H21_15-16 | 1.9137 | 0.1685 |
