Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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5' |
G |
- |
G |
- |
A |
- |
T |
- |
A |
- |
T |
- |
A |
- |
T |
- |
C |
- |
C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
| |
3' |
C |
- |
C |
- |
T |
- |
A |
- |
T |
- |
A |
- |
T |
- |
A |
- |
G |
- |
G |
5' |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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12 |
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11 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-20_N3-1 | 2.667 | 1.911 |
| Mean | Stdev |
1_H21-20_O2-1 | 2.515 | 2.193 |
| Mean | Stdev |
1_O6-20_H41-1 | 3.132 | 2.597 |
| Mean | Stdev |
10_H41-11_O6-10 | 2.027 | 0.324 |
| Mean | Stdev |
10_N3-11_H1-10 | 2.005 | 0.162 |
| Mean | Stdev |
10_O2-11_H21-10 | 1.902 | 0.153 |
| Mean | Stdev |
2_H1-19_N3-2 | 1.975 | 0.204 |
| Mean | Stdev |
2_H21-19_O2-2 | 1.918 | 0.247 |
| Mean | Stdev |
2_O6-19_H41-2 | 1.979 | 0.259 |
| Mean | Stdev |
3_H61-18_O4-3 | 2.026 | 0.232 |
| Mean | Stdev |
3_N1-18_H3-3 | 1.981 | 0.166 |
| Mean | Stdev |
4_H3-17_N1-4 | 1.985 | 0.128 |
| Mean | Stdev |
4_O4-17_H61-4 | 2.029 | 0.211 |
| Mean | Stdev |
5_H61-16_O4-5 | 2.087 | 0.253 |
| Mean | Stdev |
5_N1-16_H3-5 | 1.973 | 0.118 |
| Mean | Stdev |
6_H3-15_N1-6 | 1.977 | 0.123 |
| Mean | Stdev |
6_O4-15_H61-6 | 2.074 | 0.249 |
| Mean | Stdev |
7_H61-14_O4-7 | 2.049 | 0.229 |
| Mean | Stdev |
7_N1-14_H3-7 | 1.977 | 0.123 |
| Mean | Stdev |
8_H3-13_N1-8 | 1.980 | 0.120 |
| Mean | Stdev |
8_O4-13_H61-8 | 2.029 | 0.199 |
| Mean | Stdev |
9_H41-12_O6-9 | 1.969 | 0.179 |
| Mean | Stdev |
9_N3-12_H1-9 | 1.965 | 0.101 |
| Mean | Stdev |
9_O2-12_H21-9 | 1.914 | 0.137 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-20 | 3.1319 | 2.5971 |
1 | H1-N3_1-20 | 2.6668 | 1.9110 |
1 | H21-O2_1-20 | 2.5146 | 2.1932 |
2 | O6-H41_2-19 | 1.9788 | 0.2590 |
2 | H1-N3_2-19 | 1.9748 | 0.2036 |
2 | H21-O2_2-19 | 1.9179 | 0.2471 |
3 | N1-H3_3-18 | 1.9808 | 0.1657 |
3 | H61-O4_3-18 | 2.0261 | 0.2322 |
4 | H3-N1_4-17 | 1.9853 | 0.1280 |
4 | O4-H61_4-17 | 2.0287 | 0.2112 |
5 | N1-H3_5-16 | 1.9731 | 0.1181 |
5 | H61-O4_5-16 | 2.0875 | 0.2529 |
6 | H3-N1_6-15 | 1.9770 | 0.1228 |
6 | O4-H61_6-15 | 2.0739 | 0.2488 |
7 | N1-H3_7-14 | 1.9772 | 0.1231 |
7 | H61-O4_7-14 | 2.0486 | 0.2290 |
8 | H3-N1_8-13 | 1.9797 | 0.1200 |
8 | O4-H61_8-13 | 2.0288 | 0.1992 |
9 | H41-O6_9-12 | 1.9689 | 0.1789 |
9 | N3-H1_9-12 | 1.9652 | 0.1007 |
9 | O2-H21_9-12 | 1.9140 | 0.1374 |
10 | H41-O6_10-11 | 2.0266 | 0.3240 |
10 | N3-H1_10-11 | 2.0053 | 0.1623 |
10 | O2-H21_10-11 | 1.9020 | 0.1534 |