Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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5' |
A |
- |
G |
- |
G |
- |
G |
- |
G |
- |
C |
- |
C |
- |
C |
- |
C |
- |
T |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
T |
- |
C |
- |
C |
- |
C |
- |
C |
- |
G |
- |
G |
- |
G |
- |
G |
- |
A |
5' |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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12 |
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11 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H61-20_O4-1 | 6.986 | 4.482 |
| Mean | Stdev |
1_N1-20_H3-1 | 6.513 | 3.774 |
| Mean | Stdev |
10_H3-11_N1-10 | 4.639 | 1.385 |
| Mean | Stdev |
10_O4-11_H61-10 | 5.624 | 1.377 |
| Mean | Stdev |
2_H1-19_N3-2 | 1.987 | 0.135 |
| Mean | Stdev |
2_H21-19_O2-2 | 1.909 | 0.141 |
| Mean | Stdev |
2_O6-19_H41-2 | 2.000 | 0.280 |
| Mean | Stdev |
3_H1-18_N3-3 | 1.975 | 0.094 |
| Mean | Stdev |
3_H21-18_O2-3 | 1.889 | 0.120 |
| Mean | Stdev |
3_O6-18_H41-3 | 1.966 | 0.159 |
| Mean | Stdev |
4_H1-17_N3-4 | 1.973 | 0.103 |
| Mean | Stdev |
4_H21-17_O2-4 | 1.880 | 0.118 |
| Mean | Stdev |
4_O6-17_H41-4 | 1.964 | 0.185 |
| Mean | Stdev |
5_H1-16_N3-5 | 1.974 | 0.098 |
| Mean | Stdev |
5_H21-16_O2-5 | 1.898 | 0.125 |
| Mean | Stdev |
5_O6-16_H41-5 | 1.965 | 0.167 |
| Mean | Stdev |
6_H41-15_O6-6 | 1.960 | 0.185 |
| Mean | Stdev |
6_N3-15_H1-6 | 1.968 | 0.102 |
| Mean | Stdev |
6_O2-15_H21-6 | 1.889 | 0.121 |
| Mean | Stdev |
7_H41-14_O6-7 | 1.959 | 0.156 |
| Mean | Stdev |
7_N3-14_H1-7 | 1.982 | 0.099 |
| Mean | Stdev |
7_O2-14_H21-7 | 1.897 | 0.128 |
| Mean | Stdev |
8_H41-13_O6-8 | 2.011 | 0.200 |
| Mean | Stdev |
8_N3-13_H1-8 | 1.988 | 0.108 |
| Mean | Stdev |
8_O2-13_H21-8 | 1.895 | 0.128 |
| Mean | Stdev |
9_H41-12_O6-9 | 2.244 | 0.557 |
| Mean | Stdev |
9_N3-12_H1-9 | 2.030 | 0.259 |
| Mean | Stdev |
9_O2-12_H21-9 | 1.908 | 0.209 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | N1-H3_1-20 | 6.5133 | 3.7737 |
1 | H61-O4_1-20 | 6.9855 | 4.4822 |
2 | O6-H41_2-19 | 1.9998 | 0.2796 |
2 | H1-N3_2-19 | 1.9869 | 0.1354 |
2 | H21-O2_2-19 | 1.9086 | 0.1412 |
3 | O6-H41_3-18 | 1.9661 | 0.1588 |
3 | H1-N3_3-18 | 1.9749 | 0.0939 |
3 | H21-O2_3-18 | 1.8892 | 0.1200 |
4 | O6-H41_4-17 | 1.9638 | 0.1855 |
4 | H1-N3_4-17 | 1.9732 | 0.1031 |
4 | H21-O2_4-17 | 1.8804 | 0.1178 |
5 | O6-H41_5-16 | 1.9651 | 0.1666 |
5 | H1-N3_5-16 | 1.9742 | 0.0981 |
5 | H21-O2_5-16 | 1.8982 | 0.1248 |
6 | H41-O6_6-15 | 1.9601 | 0.1855 |
6 | N3-H1_6-15 | 1.9678 | 0.1020 |
6 | O2-H21_6-15 | 1.8892 | 0.1207 |
7 | H41-O6_7-14 | 1.9593 | 0.1562 |
7 | N3-H1_7-14 | 1.9823 | 0.0988 |
7 | O2-H21_7-14 | 1.8975 | 0.1279 |
8 | H41-O6_8-13 | 2.0115 | 0.1996 |
8 | N3-H1_8-13 | 1.9885 | 0.1077 |
8 | O2-H21_8-13 | 1.8950 | 0.1279 |
9 | H41-O6_9-12 | 2.2439 | 0.5571 |
9 | N3-H1_9-12 | 2.0296 | 0.2591 |
9 | O2-H21_9-12 | 1.9081 | 0.2090 |
10 | H3-N1_10-11 | 4.6393 | 1.3847 |
10 | O4-H61_10-11 | 5.6240 | 1.3771 |