Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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A |
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T |
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T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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C |
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G |
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C |
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T |
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T |
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A |
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A |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 10.389 | 10.528 |
| Mean | Stdev |
1_N3-24_H1-1 | 10.175 | 10.228 |
| Mean | Stdev |
1_O2-24_H21-1 | 9.957 | 9.978 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.972 | 0.104 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.901 | 0.132 |
| Mean | Stdev |
10_O6-15_H41-10 | 2.023 | 0.221 |
| Mean | Stdev |
11_H41-14_O6-11 | 2.000 | 0.248 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.972 | 0.120 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.901 | 0.137 |
| Mean | Stdev |
12_H1-13_N3-12 | 2.151 | 0.929 |
| Mean | Stdev |
12_H21-13_O2-12 | 2.054 | 0.735 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.257 | 1.263 |
| Mean | Stdev |
2_H1-23_N3-2 | 2.064 | 0.459 |
| Mean | Stdev |
2_H21-23_O2-2 | 2.067 | 0.863 |
| Mean | Stdev |
2_O6-23_H41-2 | 2.005 | 0.239 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.963 | 0.163 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.967 | 0.095 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.908 | 0.134 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.977 | 0.107 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.926 | 0.157 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.964 | 0.177 |
| Mean | Stdev |
5_H61-20_O4-5 | 2.811 | 1.269 |
| Mean | Stdev |
5_N1-20_H3-5 | 3.932 | 2.509 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.142 | 0.408 |
| Mean | Stdev |
6_N1-19_H3-6 | 2.080 | 0.356 |
| Mean | Stdev |
7_H3-18_N1-7 | 2.588 | 1.528 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.608 | 1.630 |
| Mean | Stdev |
8_H3-17_N1-8 | 8.088 | 3.276 |
| Mean | Stdev |
8_O4-17_H61-8 | 7.723 | 3.325 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.979 | 0.240 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.989 | 0.177 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.939 | 0.210 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 10.3888 | 10.5285 |
1 | N3-H1_1-24 | 10.1753 | 10.2279 |
1 | O2-H21_1-24 | 9.9572 | 9.9779 |
2 | O6-H41_2-23 | 2.0052 | 0.2389 |
2 | H1-N3_2-23 | 2.0641 | 0.4587 |
2 | H21-O2_2-23 | 2.0668 | 0.8625 |
3 | H41-O6_3-22 | 1.9627 | 0.1625 |
3 | N3-H1_3-22 | 1.9667 | 0.0952 |
3 | O2-H21_3-22 | 1.9081 | 0.1341 |
4 | O6-H41_4-21 | 1.9639 | 0.1768 |
4 | H1-N3_4-21 | 1.9774 | 0.1066 |
4 | H21-O2_4-21 | 1.9263 | 0.1568 |
5 | N1-H3_5-20 | 3.9320 | 2.5088 |
5 | H61-O4_5-20 | 2.8114 | 1.2691 |
6 | N1-H3_6-19 | 2.0801 | 0.3560 |
6 | H61-O4_6-19 | 2.1423 | 0.4079 |
7 | H3-N1_7-18 | 2.5881 | 1.5279 |
7 | O4-H61_7-18 | 2.6079 | 1.6298 |
8 | H3-N1_8-17 | 8.0880 | 3.2764 |
8 | O4-H61_8-17 | 7.7225 | 3.3250 |
9 | H41-O6_9-16 | 1.9791 | 0.2396 |
9 | N3-H1_9-16 | 1.9886 | 0.1772 |
9 | O2-H21_9-16 | 1.9387 | 0.2104 |
10 | O6-H41_10-15 | 2.0234 | 0.2207 |
10 | H1-N3_10-15 | 1.9716 | 0.1037 |
10 | H21-O2_10-15 | 1.9014 | 0.1318 |
11 | H41-O6_11-14 | 2.0000 | 0.2481 |
11 | N3-H1_11-14 | 1.9719 | 0.1205 |
11 | O2-H21_11-14 | 1.9011 | 0.1366 |
12 | O6-H41_12-13 | 2.2575 | 1.2628 |
12 | H1-N3_12-13 | 2.1505 | 0.9293 |
12 | H21-O2_12-13 | 2.0536 | 0.7346 |