Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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A |
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T |
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T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
- |
C |
- |
T |
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T |
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A |
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A |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 2.414 | 1.514 |
| Mean | Stdev |
1_N3-24_H1-1 | 2.289 | 1.167 |
| Mean | Stdev |
1_O2-24_H21-1 | 2.199 | 1.032 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.972 | 0.091 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.899 | 0.126 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.949 | 0.159 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.938 | 0.143 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.967 | 0.091 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.898 | 0.127 |
| Mean | Stdev |
12_H1-13_N3-12 | 1.977 | 0.121 |
| Mean | Stdev |
12_H21-13_O2-12 | 1.927 | 0.154 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.027 | 0.249 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.964 | 0.092 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.890 | 0.126 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.938 | 0.146 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.950 | 0.161 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.973 | 0.093 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.902 | 0.125 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.969 | 0.091 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.885 | 0.120 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.970 | 0.161 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.997 | 0.206 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.991 | 0.129 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.013 | 0.190 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.981 | 0.124 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.981 | 0.123 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.007 | 0.188 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.989 | 0.125 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.988 | 0.189 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.964 | 0.159 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.969 | 0.093 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.888 | 0.123 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 2.4142 | 1.5138 |
1 | N3-H1_1-24 | 2.2886 | 1.1667 |
1 | O2-H21_1-24 | 2.1993 | 1.0317 |
2 | O6-H41_2-23 | 1.9380 | 0.1458 |
2 | H1-N3_2-23 | 1.9645 | 0.0922 |
2 | H21-O2_2-23 | 1.8901 | 0.1258 |
3 | H41-O6_3-22 | 1.9501 | 0.1612 |
3 | N3-H1_3-22 | 1.9730 | 0.0931 |
3 | O2-H21_3-22 | 1.9016 | 0.1249 |
4 | O6-H41_4-21 | 1.9697 | 0.1608 |
4 | H1-N3_4-21 | 1.9688 | 0.0914 |
4 | H21-O2_4-21 | 1.8845 | 0.1197 |
5 | N1-H3_5-20 | 1.9908 | 0.1291 |
5 | H61-O4_5-20 | 1.9972 | 0.2062 |
6 | N1-H3_6-19 | 1.9814 | 0.1244 |
6 | H61-O4_6-19 | 2.0127 | 0.1899 |
7 | H3-N1_7-18 | 1.9810 | 0.1231 |
7 | O4-H61_7-18 | 2.0074 | 0.1884 |
8 | H3-N1_8-17 | 1.9888 | 0.1250 |
8 | O4-H61_8-17 | 1.9884 | 0.1885 |
9 | H41-O6_9-16 | 1.9639 | 0.1586 |
9 | N3-H1_9-16 | 1.9691 | 0.0934 |
9 | O2-H21_9-16 | 1.8880 | 0.1231 |
10 | O6-H41_10-15 | 1.9494 | 0.1588 |
10 | H1-N3_10-15 | 1.9723 | 0.0909 |
10 | H21-O2_10-15 | 1.8985 | 0.1257 |
11 | H41-O6_11-14 | 1.9378 | 0.1435 |
11 | N3-H1_11-14 | 1.9674 | 0.0910 |
11 | O2-H21_11-14 | 1.8976 | 0.1266 |
12 | O6-H41_12-13 | 2.0268 | 0.2489 |
12 | H1-N3_12-13 | 1.9768 | 0.1211 |
12 | H21-O2_12-13 | 1.9267 | 0.1544 |