Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
- |
G |
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C |
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G |
- |
A |
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A |
- |
T |
- |
T |
- |
C |
- |
G |
- |
C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
- |
G |
- |
C |
- |
T |
- |
T |
- |
A |
- |
A |
- |
G |
- |
C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 2.018 | 0.237 |
| Mean | Stdev |
1_N3-24_H1-1 | 1.976 | 0.136 |
| Mean | Stdev |
1_O2-24_H21-1 | 1.930 | 0.204 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.974 | 0.092 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.897 | 0.123 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.953 | 0.155 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.938 | 0.146 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.965 | 0.092 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.891 | 0.124 |
| Mean | Stdev |
12_H1-13_N3-12 | 2.509 | 1.488 |
| Mean | Stdev |
12_H21-13_O2-12 | 2.379 | 1.248 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.720 | 2.002 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.966 | 0.093 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.895 | 0.126 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.941 | 0.147 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.951 | 0.152 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.976 | 0.091 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.900 | 0.124 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.978 | 0.124 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.891 | 0.126 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.981 | 0.239 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.991 | 0.179 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.993 | 0.126 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.011 | 0.190 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.975 | 0.119 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.985 | 0.123 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.013 | 0.189 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.988 | 0.128 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.995 | 0.195 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.973 | 0.206 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.973 | 0.110 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.885 | 0.124 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 2.0180 | 0.2372 |
1 | N3-H1_1-24 | 1.9761 | 0.1355 |
1 | O2-H21_1-24 | 1.9297 | 0.2043 |
2 | O6-H41_2-23 | 1.9414 | 0.1468 |
2 | H1-N3_2-23 | 1.9663 | 0.0932 |
2 | H21-O2_2-23 | 1.8951 | 0.1258 |
3 | H41-O6_3-22 | 1.9507 | 0.1523 |
3 | N3-H1_3-22 | 1.9760 | 0.0909 |
3 | O2-H21_3-22 | 1.9000 | 0.1240 |
4 | O6-H41_4-21 | 1.9810 | 0.2392 |
4 | H1-N3_4-21 | 1.9777 | 0.1244 |
4 | H21-O2_4-21 | 1.8907 | 0.1259 |
5 | N1-H3_5-20 | 1.9928 | 0.1261 |
5 | H61-O4_5-20 | 1.9912 | 0.1792 |
6 | N1-H3_6-19 | 1.9750 | 0.1191 |
6 | H61-O4_6-19 | 2.0109 | 0.1898 |
7 | H3-N1_7-18 | 1.9847 | 0.1235 |
7 | O4-H61_7-18 | 2.0129 | 0.1889 |
8 | H3-N1_8-17 | 1.9882 | 0.1278 |
8 | O4-H61_8-17 | 1.9947 | 0.1949 |
9 | H41-O6_9-16 | 1.9731 | 0.2061 |
9 | N3-H1_9-16 | 1.9729 | 0.1103 |
9 | O2-H21_9-16 | 1.8855 | 0.1245 |
10 | O6-H41_10-15 | 1.9532 | 0.1549 |
10 | H1-N3_10-15 | 1.9735 | 0.0924 |
10 | H21-O2_10-15 | 1.8970 | 0.1234 |
11 | H41-O6_11-14 | 1.9376 | 0.1458 |
11 | N3-H1_11-14 | 1.9646 | 0.0921 |
11 | O2-H21_11-14 | 1.8912 | 0.1245 |
12 | O6-H41_12-13 | 2.7198 | 2.0015 |
12 | H1-N3_12-13 | 2.5087 | 1.4881 |
12 | H21-O2_12-13 | 2.3791 | 1.2475 |