Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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A |
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T |
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T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
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C |
- |
T |
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T |
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A |
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A |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 2.949 | 1.966 |
| Mean | Stdev |
1_N3-24_H1-1 | 2.696 | 1.494 |
| Mean | Stdev |
1_O2-24_H21-1 | 2.560 | 1.317 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.990 | 0.144 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.936 | 0.228 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.954 | 0.166 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.948 | 0.154 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.964 | 0.092 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.902 | 0.135 |
| Mean | Stdev |
12_H1-13_N3-12 | 2.926 | 1.504 |
| Mean | Stdev |
12_H21-13_O2-12 | 2.843 | 1.466 |
| Mean | Stdev |
12_O6-13_H41-12 | 3.031 | 1.776 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.964 | 0.091 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.889 | 0.122 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.940 | 0.144 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.953 | 0.156 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.975 | 0.092 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.898 | 0.123 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.971 | 0.093 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.891 | 0.126 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.968 | 0.158 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.986 | 0.185 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.992 | 0.127 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.029 | 0.200 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.977 | 0.119 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.974 | 0.117 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.017 | 0.198 |
| Mean | Stdev |
8_H3-17_N1-8 | 2.001 | 0.134 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.977 | 0.190 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.980 | 0.188 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.971 | 0.101 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.883 | 0.119 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 2.9486 | 1.9655 |
1 | N3-H1_1-24 | 2.6959 | 1.4937 |
1 | O2-H21_1-24 | 2.5601 | 1.3169 |
2 | O6-H41_2-23 | 1.9397 | 0.1442 |
2 | H1-N3_2-23 | 1.9641 | 0.0912 |
2 | H21-O2_2-23 | 1.8893 | 0.1216 |
3 | H41-O6_3-22 | 1.9526 | 0.1561 |
3 | N3-H1_3-22 | 1.9752 | 0.0916 |
3 | O2-H21_3-22 | 1.8982 | 0.1231 |
4 | O6-H41_4-21 | 1.9684 | 0.1582 |
4 | H1-N3_4-21 | 1.9708 | 0.0926 |
4 | H21-O2_4-21 | 1.8906 | 0.1261 |
5 | N1-H3_5-20 | 1.9916 | 0.1265 |
5 | H61-O4_5-20 | 1.9858 | 0.1851 |
6 | N1-H3_6-19 | 1.9767 | 0.1190 |
6 | H61-O4_6-19 | 2.0288 | 0.2002 |
7 | H3-N1_7-18 | 1.9740 | 0.1173 |
7 | O4-H61_7-18 | 2.0174 | 0.1981 |
8 | H3-N1_8-17 | 2.0010 | 0.1338 |
8 | O4-H61_8-17 | 1.9769 | 0.1900 |
9 | H41-O6_9-16 | 1.9795 | 0.1878 |
9 | N3-H1_9-16 | 1.9708 | 0.1011 |
9 | O2-H21_9-16 | 1.8825 | 0.1194 |
10 | O6-H41_10-15 | 1.9543 | 0.1663 |
10 | H1-N3_10-15 | 1.9901 | 0.1437 |
10 | H21-O2_10-15 | 1.9363 | 0.2279 |
11 | H41-O6_11-14 | 1.9484 | 0.1545 |
11 | N3-H1_11-14 | 1.9641 | 0.0925 |
11 | O2-H21_11-14 | 1.9022 | 0.1352 |
12 | O6-H41_12-13 | 3.0307 | 1.7755 |
12 | H1-N3_12-13 | 2.9259 | 1.5042 |
12 | H21-O2_12-13 | 2.8430 | 1.4664 |