Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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5' |
C |
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C |
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A |
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T |
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A |
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C |
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A |
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A |
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T |
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A |
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C |
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G |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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G |
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T |
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A |
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T |
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G |
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A |
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T |
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A |
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T |
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G |
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C |
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C |
5' |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-26_O6-1 | 2.017 | 0.346 |
| Mean | Stdev |
1_N3-26_H1-1 | 1.995 | 0.246 |
| Mean | Stdev |
1_O2-26_H21-1 | 1.968 | 0.277 |
| Mean | Stdev |
10_H61-17_O4-10 | 2.003 | 0.211 |
| Mean | Stdev |
10_N1-17_H3-10 | 1.984 | 0.129 |
| Mean | Stdev |
11_H41-16_O6-11 | 1.986 | 0.171 |
| Mean | Stdev |
11_N3-16_H1-11 | 1.982 | 0.098 |
| Mean | Stdev |
11_O2-16_H21-11 | 1.884 | 0.121 |
| Mean | Stdev |
12_H1-15_N3-12 | 1.956 | 0.092 |
| Mean | Stdev |
12_H21-15_O2-12 | 1.876 | 0.117 |
| Mean | Stdev |
12_O6-15_H41-12 | 1.969 | 0.173 |
| Mean | Stdev |
13_H1-14_N3-13 | 2.120 | 0.848 |
| Mean | Stdev |
13_H21-14_O2-13 | 2.078 | 0.754 |
| Mean | Stdev |
13_O6-14_H41-13 | 2.192 | 1.084 |
| Mean | Stdev |
2_H41-25_O6-2 | 1.984 | 0.223 |
| Mean | Stdev |
2_N3-25_H1-2 | 1.964 | 0.108 |
| Mean | Stdev |
2_O2-25_H21-2 | 1.869 | 0.117 |
| Mean | Stdev |
3_H61-24_O4-3 | 2.029 | 0.219 |
| Mean | Stdev |
3_N1-24_H3-3 | 1.980 | 0.122 |
| Mean | Stdev |
4_H3-23_N1-4 | 1.984 | 0.132 |
| Mean | Stdev |
4_O4-23_H61-4 | 2.053 | 0.238 |
| Mean | Stdev |
5_H61-22_O4-5 | 1.997 | 0.205 |
| Mean | Stdev |
5_N1-22_H3-5 | 1.976 | 0.124 |
| Mean | Stdev |
6_H41-21_O6-6 | 2.018 | 0.326 |
| Mean | Stdev |
6_N3-21_H1-6 | 1.999 | 0.209 |
| Mean | Stdev |
6_O2-21_H21-6 | 1.915 | 0.193 |
| Mean | Stdev |
8_H61-19_O4-8 | 2.068 | 0.286 |
| Mean | Stdev |
8_N1-19_H3-8 | 2.035 | 0.231 |
| Mean | Stdev |
9_H3-18_N1-9 | 1.993 | 0.172 |
| Mean | Stdev |
9_O4-18_H61-9 | 2.030 | 0.280 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-26 | 2.0172 | 0.3459 |
1 | N3-H1_1-26 | 1.9946 | 0.2457 |
1 | O2-H21_1-26 | 1.9685 | 0.2768 |
2 | H41-O6_2-25 | 1.9845 | 0.2234 |
2 | N3-H1_2-25 | 1.9635 | 0.1085 |
2 | O2-H21_2-25 | 1.8690 | 0.1166 |
3 | N1-H3_3-24 | 1.9798 | 0.1221 |
3 | H61-O4_3-24 | 2.0285 | 0.2187 |
4 | H3-N1_4-23 | 1.9844 | 0.1323 |
4 | O4-H61_4-23 | 2.0531 | 0.2381 |
5 | N1-H3_5-22 | 1.9764 | 0.1243 |
5 | H61-O4_5-22 | 1.9967 | 0.2046 |
6 | H41-O6_6-21 | 2.0180 | 0.3256 |
6 | N3-H1_6-21 | 1.9989 | 0.2089 |
6 | O2-H21_6-21 | 1.9155 | 0.1931 |
8 | N1-H3_8-19 | 2.0348 | 0.2310 |
8 | H61-O4_8-19 | 2.0683 | 0.2864 |
9 | H3-N1_9-18 | 1.9934 | 0.1723 |
9 | O4-H61_9-18 | 2.0302 | 0.2801 |
10 | N1-H3_10-17 | 1.9842 | 0.1292 |
10 | H61-O4_10-17 | 2.0033 | 0.2115 |
11 | H41-O6_11-16 | 1.9856 | 0.1709 |
11 | N3-H1_11-16 | 1.9821 | 0.0977 |
11 | O2-H21_11-16 | 1.8840 | 0.1210 |
12 | O6-H41_12-15 | 1.9686 | 0.1733 |
12 | H1-N3_12-15 | 1.9565 | 0.0922 |
12 | H21-O2_12-15 | 1.8759 | 0.1165 |
13 | O6-H41_13-14 | 2.1920 | 1.0842 |
13 | H1-N3_13-14 | 2.1196 | 0.8477 |
13 | H21-O2_13-14 | 2.0777 | 0.7539 |