Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
11 |
|
12 |
|
5' |
C |
- |
G |
- |
C |
- |
G |
- |
A |
- |
C |
- |
G |
- |
T |
- |
C |
- |
G |
- |
C |
- |
G |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
G |
- |
C |
- |
G |
- |
C |
- |
T |
- |
G |
- |
C |
- |
A |
- |
G |
- |
C |
- |
G |
- |
C |
5' |
|
24 |
|
23 |
|
22 |
|
21 |
|
20 |
|
19 |
|
18 |
|
17 |
|
16 |
|
15 |
|
14 |
|
13 |
|
Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 2.471 | 1.645 |
| Mean | Stdev |
1_N3-24_H1-1 | 2.410 | 1.641 |
| Mean | Stdev |
1_O2-24_H21-1 | 2.382 | 1.710 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.972 | 0.092 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.909 | 0.128 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.956 | 0.158 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.941 | 0.143 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.965 | 0.092 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.895 | 0.125 |
| Mean | Stdev |
12_H1-13_N3-12 | 2.038 | 0.519 |
| Mean | Stdev |
12_H21-13_O2-12 | 1.984 | 0.461 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.116 | 0.726 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.964 | 0.094 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.894 | 0.126 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.939 | 0.145 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.959 | 0.162 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.975 | 0.096 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.911 | 0.131 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.962 | 0.089 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.884 | 0.120 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.954 | 0.153 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.946 | 0.159 |
| Mean | Stdev |
5_N1-20_H3-5 | 2.005 | 0.131 |
| Mean | Stdev |
6_H41-19_O6-6 | 1.975 | 0.162 |
| Mean | Stdev |
6_N3-19_H1-6 | 1.967 | 0.096 |
| Mean | Stdev |
6_O2-19_H21-6 | 1.870 | 0.118 |
| Mean | Stdev |
7_H1-18_N3-7 | 1.970 | 0.131 |
| Mean | Stdev |
7_H21-18_O2-7 | 1.873 | 0.131 |
| Mean | Stdev |
7_O6-18_H41-7 | 1.986 | 0.214 |
| Mean | Stdev |
8_H3-17_N1-8 | 2.002 | 0.129 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.947 | 0.157 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.963 | 0.163 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.965 | 0.092 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.880 | 0.119 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 2.4710 | 1.6452 |
1 | N3-H1_1-24 | 2.4104 | 1.6407 |
1 | O2-H21_1-24 | 2.3819 | 1.7095 |
2 | O6-H41_2-23 | 1.9386 | 0.1454 |
2 | H1-N3_2-23 | 1.9636 | 0.0938 |
2 | H21-O2_2-23 | 1.8941 | 0.1256 |
3 | H41-O6_3-22 | 1.9590 | 0.1617 |
3 | N3-H1_3-22 | 1.9746 | 0.0960 |
3 | O2-H21_3-22 | 1.9113 | 0.1312 |
4 | O6-H41_4-21 | 1.9537 | 0.1531 |
4 | H1-N3_4-21 | 1.9619 | 0.0890 |
4 | H21-O2_4-21 | 1.8843 | 0.1197 |
5 | N1-H3_5-20 | 2.0053 | 0.1311 |
5 | H61-O4_5-20 | 1.9459 | 0.1592 |
6 | H41-O6_6-19 | 1.9751 | 0.1622 |
6 | N3-H1_6-19 | 1.9671 | 0.0956 |
6 | O2-H21_6-19 | 1.8700 | 0.1176 |
7 | O6-H41_7-18 | 1.9857 | 0.2136 |
7 | H1-N3_7-18 | 1.9700 | 0.1309 |
7 | H21-O2_7-18 | 1.8726 | 0.1307 |
8 | H3-N1_8-17 | 2.0017 | 0.1288 |
8 | O4-H61_8-17 | 1.9473 | 0.1574 |
9 | H41-O6_9-16 | 1.9631 | 0.1631 |
9 | N3-H1_9-16 | 1.9650 | 0.0922 |
9 | O2-H21_9-16 | 1.8801 | 0.1188 |
10 | O6-H41_10-15 | 1.9557 | 0.1581 |
10 | H1-N3_10-15 | 1.9719 | 0.0925 |
10 | H21-O2_10-15 | 1.9089 | 0.1277 |
11 | H41-O6_11-14 | 1.9407 | 0.1432 |
11 | N3-H1_11-14 | 1.9648 | 0.0917 |
11 | O2-H21_11-14 | 1.8954 | 0.1252 |
12 | O6-H41_12-13 | 2.1164 | 0.7256 |
12 | H1-N3_12-13 | 2.0384 | 0.5195 |
12 | H21-O2_12-13 | 1.9835 | 0.4609 |