Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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X |
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G |
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T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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3' |
G |
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C |
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G |
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C |
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T |
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G |
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X |
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A |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 3.509 | 2.879 |
| Mean | Stdev |
1_N3-24_H1-1 | 3.443 | 2.837 |
| Mean | Stdev |
1_O2-24_H21-1 | 3.421 | 2.931 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.974 | 0.094 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.897 | 0.122 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.961 | 0.163 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.942 | 0.147 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.968 | 0.092 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.895 | 0.126 |
| Mean | Stdev |
12_H1-13_N3-12 | 1.971 | 0.127 |
| Mean | Stdev |
12_H21-13_O2-12 | 1.940 | 0.202 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.038 | 0.244 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.966 | 0.091 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.890 | 0.124 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.945 | 0.155 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.950 | 0.152 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.974 | 0.093 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.903 | 0.128 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.962 | 0.089 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.874 | 0.116 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.964 | 0.150 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.965 | 0.177 |
| Mean | Stdev |
5_N1-20_H3-5 | 2.005 | 0.136 |
| Mean | Stdev |
8_H3-17_N1-8 | 2.016 | 0.141 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.953 | 0.163 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.953 | 0.151 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.962 | 0.090 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.879 | 0.118 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 3.5087 | 2.8786 |
1 | N3-H1_1-24 | 3.4427 | 2.8370 |
1 | O2-H21_1-24 | 3.4213 | 2.9314 |
2 | O6-H41_2-23 | 1.9452 | 0.1546 |
2 | H1-N3_2-23 | 1.9659 | 0.0915 |
2 | H21-O2_2-23 | 1.8898 | 0.1243 |
3 | H41-O6_3-22 | 1.9498 | 0.1523 |
3 | N3-H1_3-22 | 1.9735 | 0.0928 |
3 | O2-H21_3-22 | 1.9033 | 0.1280 |
4 | O6-H41_4-21 | 1.9640 | 0.1502 |
4 | H1-N3_4-21 | 1.9620 | 0.0889 |
4 | H21-O2_4-21 | 1.8739 | 0.1160 |
5 | N1-H3_5-20 | 2.0054 | 0.1360 |
5 | H61-O4_5-20 | 1.9653 | 0.1769 |
8 | H3-N1_8-17 | 2.0164 | 0.1406 |
8 | O4-H61_8-17 | 1.9531 | 0.1625 |
9 | H41-O6_9-16 | 1.9529 | 0.1507 |
9 | N3-H1_9-16 | 1.9618 | 0.0899 |
9 | O2-H21_9-16 | 1.8794 | 0.1181 |
10 | O6-H41_10-15 | 1.9612 | 0.1633 |
10 | H1-N3_10-15 | 1.9738 | 0.0937 |
10 | H21-O2_10-15 | 1.8975 | 0.1220 |
11 | H41-O6_11-14 | 1.9421 | 0.1468 |
11 | N3-H1_11-14 | 1.9680 | 0.0920 |
11 | O2-H21_11-14 | 1.8953 | 0.1264 |
12 | O6-H41_12-13 | 2.0380 | 0.2444 |
12 | H1-N3_12-13 | 1.9714 | 0.1274 |
12 | H21-O2_12-13 | 1.9403 | 0.2017 |