Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
- |
A |
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A |
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T |
- |
T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
- |
C |
- |
T |
- |
T |
- |
A |
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A |
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G |
- |
C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 5.987 | 0.209 |
| Mean | Stdev |
1_N3-24_H1-1 | 5.420 | 0.196 |
| Mean | Stdev |
1_O2-24_H21-1 | 3.833 | 0.380 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.978 | 0.096 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.896 | 0.127 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.958 | 0.161 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.946 | 0.145 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.966 | 0.092 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.912 | 0.135 |
| Mean | Stdev |
12_H1-13_N3-12 | 5.423 | 0.219 |
| Mean | Stdev |
12_H21-13_O2-12 | 3.836 | 0.404 |
| Mean | Stdev |
12_O6-13_H41-12 | 5.987 | 0.218 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.964 | 0.093 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.915 | 0.139 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.946 | 0.147 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.959 | 0.162 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.980 | 0.095 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.899 | 0.125 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.962 | 0.096 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.896 | 0.124 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.980 | 0.179 |
| Mean | Stdev |
5_H61-20_O4-5 | 2.018 | 0.220 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.986 | 0.126 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.054 | 0.218 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.974 | 0.118 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.974 | 0.130 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.051 | 0.223 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.987 | 0.127 |
| Mean | Stdev |
8_O4-17_H61-8 | 2.009 | 0.207 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.987 | 0.231 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.966 | 0.115 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.895 | 0.124 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 5.9875 | 0.2095 |
1 | N3-H1_1-24 | 5.4197 | 0.1962 |
1 | O2-H21_1-24 | 3.8332 | 0.3797 |
2 | O6-H41_2-23 | 1.9465 | 0.1469 |
2 | H1-N3_2-23 | 1.9640 | 0.0926 |
2 | H21-O2_2-23 | 1.9152 | 0.1389 |
3 | H41-O6_3-22 | 1.9591 | 0.1616 |
3 | N3-H1_3-22 | 1.9804 | 0.0949 |
3 | O2-H21_3-22 | 1.8987 | 0.1247 |
4 | O6-H41_4-21 | 1.9799 | 0.1788 |
4 | H1-N3_4-21 | 1.9615 | 0.0964 |
4 | H21-O2_4-21 | 1.8958 | 0.1239 |
5 | N1-H3_5-20 | 1.9862 | 0.1262 |
5 | H61-O4_5-20 | 2.0178 | 0.2200 |
6 | N1-H3_6-19 | 1.9742 | 0.1178 |
6 | H61-O4_6-19 | 2.0542 | 0.2180 |
7 | H3-N1_7-18 | 1.9739 | 0.1295 |
7 | O4-H61_7-18 | 2.0508 | 0.2226 |
8 | H3-N1_8-17 | 1.9872 | 0.1266 |
8 | O4-H61_8-17 | 2.0089 | 0.2072 |
9 | H41-O6_9-16 | 1.9867 | 0.2307 |
9 | N3-H1_9-16 | 1.9663 | 0.1146 |
9 | O2-H21_9-16 | 1.8946 | 0.1245 |
10 | O6-H41_10-15 | 1.9583 | 0.1613 |
10 | H1-N3_10-15 | 1.9781 | 0.0955 |
10 | H21-O2_10-15 | 1.8957 | 0.1269 |
11 | H41-O6_11-14 | 1.9459 | 0.1455 |
11 | N3-H1_11-14 | 1.9662 | 0.0918 |
11 | O2-H21_11-14 | 1.9121 | 0.1348 |
12 | O6-H41_12-13 | 5.9868 | 0.2178 |
12 | H1-N3_12-13 | 5.4232 | 0.2188 |
12 | H21-O2_12-13 | 3.8364 | 0.4041 |