Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
11 |
|
12 |
|
13 |
|
14 |
|
15 |
|
16 |
|
5' |
C |
- |
G |
- |
T |
- |
C |
- |
T |
- |
A |
- |
C |
- |
T |
- |
A |
- |
G |
- |
G |
- |
G |
- |
A |
- |
G |
- |
G |
- |
C |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
G |
- |
C |
- |
A |
- |
G |
- |
A |
- |
T |
- |
G |
- |
A |
- |
T |
- |
C |
- |
C |
- |
C |
- |
T |
- |
C |
- |
C |
- |
G |
5' |
|
32 |
|
31 |
|
30 |
|
29 |
|
28 |
|
27 |
|
26 |
|
25 |
|
24 |
|
23 |
|
22 |
|
21 |
|
20 |
|
19 |
|
18 |
|
17 |
|
Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.773 | 1.978 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.666 | 1.857 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.602 | 1.895 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.965 | 0.092 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.896 | 0.123 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.963 | 0.161 |
| Mean | Stdev |
11_H1-22_N3-11 | 1.963 | 0.094 |
| Mean | Stdev |
11_H21-22_O2-11 | 1.898 | 0.126 |
| Mean | Stdev |
11_O6-22_H41-11 | 1.952 | 0.154 |
| Mean | Stdev |
12_H1-21_N3-12 | 1.974 | 0.094 |
| Mean | Stdev |
12_H21-21_O2-12 | 1.905 | 0.129 |
| Mean | Stdev |
12_O6-21_H41-12 | 1.955 | 0.153 |
| Mean | Stdev |
13_H61-20_O4-13 | 1.993 | 0.189 |
| Mean | Stdev |
13_N1-20_H3-13 | 1.976 | 0.122 |
| Mean | Stdev |
14_H1-19_N3-14 | 1.955 | 0.094 |
| Mean | Stdev |
14_H21-19_O2-14 | 1.885 | 0.118 |
| Mean | Stdev |
14_O6-19_H41-14 | 1.979 | 0.180 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.965 | 0.096 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.899 | 0.131 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.960 | 0.160 |
| Mean | Stdev |
16_H41-17_O6-16 | 2.068 | 0.591 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.058 | 0.457 |
| Mean | Stdev |
16_O2-17_H21-16 | 2.005 | 0.764 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.970 | 0.105 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.887 | 0.124 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.979 | 0.182 |
| Mean | Stdev |
3_H3-30_N1-3 | 2.009 | 0.137 |
| Mean | Stdev |
3_O4-30_H61-3 | 1.961 | 0.173 |
| Mean | Stdev |
4_H41-29_O6-4 | 1.970 | 0.158 |
| Mean | Stdev |
4_N3-29_H1-4 | 1.964 | 0.092 |
| Mean | Stdev |
4_O2-29_H21-4 | 1.919 | 0.134 |
| Mean | Stdev |
5_H3-28_N1-5 | 1.984 | 0.135 |
| Mean | Stdev |
5_O4-28_H61-5 | 2.013 | 0.216 |
| Mean | Stdev |
6_H61-27_O4-6 | 2.014 | 0.201 |
| Mean | Stdev |
6_N1-27_H3-6 | 1.967 | 0.116 |
| Mean | Stdev |
7_H41-26_O6-7 | 2.008 | 0.178 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.981 | 0.101 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.901 | 0.128 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.955 | 0.117 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.064 | 0.277 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.017 | 0.201 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.975 | 0.122 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.7728 | 1.9784 |
1 | N3-H1_1-32 | 2.6655 | 1.8575 |
1 | O2-H21_1-32 | 2.6020 | 1.8952 |
2 | O6-H41_2-31 | 1.9792 | 0.1825 |
2 | H1-N3_2-31 | 1.9701 | 0.1054 |
2 | H21-O2_2-31 | 1.8872 | 0.1242 |
3 | H3-N1_3-30 | 2.0094 | 0.1373 |
3 | O4-H61_3-30 | 1.9606 | 0.1728 |
4 | H41-O6_4-29 | 1.9696 | 0.1580 |
4 | N3-H1_4-29 | 1.9643 | 0.0920 |
4 | O2-H21_4-29 | 1.9185 | 0.1342 |
5 | H3-N1_5-28 | 1.9836 | 0.1346 |
5 | O4-H61_5-28 | 2.0131 | 0.2160 |
6 | N1-H3_6-27 | 1.9667 | 0.1163 |
6 | H61-O4_6-27 | 2.0142 | 0.2010 |
7 | H41-O6_7-26 | 2.0076 | 0.1785 |
7 | N3-H1_7-26 | 1.9808 | 0.1010 |
7 | O2-H21_7-26 | 1.9015 | 0.1279 |
8 | H3-N1_8-25 | 1.9549 | 0.1170 |
8 | O4-H61_8-25 | 2.0644 | 0.2767 |
9 | N1-H3_9-24 | 1.9751 | 0.1216 |
9 | H61-O4_9-24 | 2.0170 | 0.2012 |
10 | O6-H41_10-23 | 1.9634 | 0.1610 |
10 | H1-N3_10-23 | 1.9654 | 0.0917 |
10 | H21-O2_10-23 | 1.8957 | 0.1233 |
11 | O6-H41_11-22 | 1.9518 | 0.1544 |
11 | H1-N3_11-22 | 1.9630 | 0.0938 |
11 | H21-O2_11-22 | 1.8976 | 0.1264 |
12 | O6-H41_12-21 | 1.9549 | 0.1528 |
12 | H1-N3_12-21 | 1.9742 | 0.0941 |
12 | H21-O2_12-21 | 1.9052 | 0.1294 |
13 | N1-H3_13-20 | 1.9758 | 0.1221 |
13 | H61-O4_13-20 | 1.9928 | 0.1887 |
14 | O6-H41_14-19 | 1.9792 | 0.1800 |
14 | H1-N3_14-19 | 1.9547 | 0.0944 |
14 | H21-O2_14-19 | 1.8845 | 0.1181 |
15 | O6-H41_15-18 | 1.9595 | 0.1603 |
15 | H1-N3_15-18 | 1.9646 | 0.0958 |
15 | H21-O2_15-18 | 1.8985 | 0.1314 |
16 | H41-O6_16-17 | 2.0676 | 0.5911 |
16 | N3-H1_16-17 | 2.0578 | 0.4565 |
16 | O2-H21_16-17 | 2.0046 | 0.7639 |