Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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C |
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T |
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A |
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C |
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A |
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G |
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G |
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A |
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G |
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G |
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C |
3' |
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3' |
G |
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C |
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A |
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G |
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A |
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T |
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G |
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A |
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5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.360 | 1.429 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.254 | 1.199 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.171 | 1.133 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.979 | 0.104 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.903 | 0.129 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.991 | 0.174 |
| Mean | Stdev |
11_H3-22_N1-11 | 1.976 | 0.124 |
| Mean | Stdev |
11_O4-22_H61-11 | 1.970 | 0.172 |
| Mean | Stdev |
12_H1-21_N3-12 | 1.971 | 0.099 |
| Mean | Stdev |
12_H21-21_O2-12 | 1.881 | 0.117 |
| Mean | Stdev |
12_O6-21_H41-12 | 1.970 | 0.169 |
| Mean | Stdev |
13_H61-20_O4-13 | 1.966 | 0.165 |
| Mean | Stdev |
13_N1-20_H3-13 | 1.992 | 0.130 |
| Mean | Stdev |
14_H1-19_N3-14 | 1.951 | 0.087 |
| Mean | Stdev |
14_H21-19_O2-14 | 1.884 | 0.119 |
| Mean | Stdev |
14_O6-19_H41-14 | 1.971 | 0.162 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.965 | 0.093 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.898 | 0.126 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.957 | 0.157 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.998 | 0.231 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.003 | 0.132 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.917 | 0.151 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.967 | 0.095 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.886 | 0.124 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.972 | 0.157 |
| Mean | Stdev |
3_H3-30_N1-3 | 2.055 | 0.433 |
| Mean | Stdev |
3_O4-30_H61-3 | 2.016 | 0.464 |
| Mean | Stdev |
4_H41-29_O6-4 | 1.976 | 0.164 |
| Mean | Stdev |
4_N3-29_H1-4 | 1.970 | 0.093 |
| Mean | Stdev |
4_O2-29_H21-4 | 1.917 | 0.132 |
| Mean | Stdev |
5_H3-28_N1-5 | 1.974 | 0.125 |
| Mean | Stdev |
5_O4-28_H61-5 | 2.017 | 0.208 |
| Mean | Stdev |
6_H61-27_O4-6 | 2.002 | 0.198 |
| Mean | Stdev |
6_N1-27_H3-6 | 1.969 | 0.117 |
| Mean | Stdev |
7_H41-26_O6-7 | 2.003 | 0.178 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.985 | 0.102 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.907 | 0.128 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.958 | 0.119 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.041 | 0.235 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.058 | 0.258 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.955 | 0.117 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.3597 | 1.4288 |
1 | N3-H1_1-32 | 2.2540 | 1.1991 |
1 | O2-H21_1-32 | 2.1711 | 1.1327 |
2 | O6-H41_2-31 | 1.9721 | 0.1567 |
2 | H1-N3_2-31 | 1.9666 | 0.0946 |
2 | H21-O2_2-31 | 1.8863 | 0.1236 |
3 | H3-N1_3-30 | 2.0552 | 0.4334 |
3 | O4-H61_3-30 | 2.0163 | 0.4638 |
4 | H41-O6_4-29 | 1.9762 | 0.1642 |
4 | N3-H1_4-29 | 1.9696 | 0.0930 |
4 | O2-H21_4-29 | 1.9173 | 0.1323 |
5 | H3-N1_5-28 | 1.9737 | 0.1246 |
5 | O4-H61_5-28 | 2.0165 | 0.2076 |
6 | N1-H3_6-27 | 1.9689 | 0.1170 |
6 | H61-O4_6-27 | 2.0022 | 0.1975 |
7 | H41-O6_7-26 | 2.0034 | 0.1780 |
7 | N3-H1_7-26 | 1.9853 | 0.1020 |
7 | O2-H21_7-26 | 1.9070 | 0.1284 |
8 | H3-N1_8-25 | 1.9581 | 0.1186 |
8 | O4-H61_8-25 | 2.0412 | 0.2354 |
9 | N1-H3_9-24 | 1.9551 | 0.1165 |
9 | H61-O4_9-24 | 2.0578 | 0.2575 |
10 | O6-H41_10-23 | 1.9913 | 0.1736 |
10 | H1-N3_10-23 | 1.9794 | 0.1038 |
10 | H21-O2_10-23 | 1.9026 | 0.1294 |
11 | H3-N1_11-22 | 1.9761 | 0.1236 |
11 | O4-H61_11-22 | 1.9700 | 0.1719 |
12 | O6-H41_12-21 | 1.9705 | 0.1692 |
12 | H1-N3_12-21 | 1.9713 | 0.0990 |
12 | H21-O2_12-21 | 1.8813 | 0.1170 |
13 | N1-H3_13-20 | 1.9922 | 0.1297 |
13 | H61-O4_13-20 | 1.9664 | 0.1653 |
14 | O6-H41_14-19 | 1.9708 | 0.1622 |
14 | H1-N3_14-19 | 1.9507 | 0.0875 |
14 | H21-O2_14-19 | 1.8844 | 0.1189 |
15 | O6-H41_15-18 | 1.9572 | 0.1574 |
15 | H1-N3_15-18 | 1.9654 | 0.0931 |
15 | H21-O2_15-18 | 1.8983 | 0.1255 |
16 | H41-O6_16-17 | 1.9985 | 0.2308 |
16 | N3-H1_16-17 | 2.0026 | 0.1322 |
16 | O2-H21_16-17 | 1.9165 | 0.1514 |