Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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T |
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C |
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T |
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C |
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C |
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T |
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A |
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G |
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C |
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G |
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A |
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G |
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G |
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C |
3' |
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x |
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3' |
G |
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C |
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A |
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G |
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A |
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G |
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G |
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A |
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T |
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C |
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G |
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C |
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T |
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C |
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C |
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5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.791 | 2.093 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.638 | 1.826 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.540 | 1.782 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.972 | 0.091 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.910 | 0.128 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.966 | 0.157 |
| Mean | Stdev |
11_H41-22_O6-11 | 1.950 | 0.149 |
| Mean | Stdev |
11_N3-22_H1-11 | 1.965 | 0.092 |
| Mean | Stdev |
11_O2-22_H21-11 | 1.903 | 0.126 |
| Mean | Stdev |
12_H1-21_N3-12 | 1.967 | 0.094 |
| Mean | Stdev |
12_H21-21_O2-12 | 1.879 | 0.114 |
| Mean | Stdev |
12_O6-21_H41-12 | 1.958 | 0.160 |
| Mean | Stdev |
13_H61-20_O4-13 | 1.967 | 0.169 |
| Mean | Stdev |
13_N1-20_H3-13 | 1.990 | 0.127 |
| Mean | Stdev |
14_H1-19_N3-14 | 1.953 | 0.089 |
| Mean | Stdev |
14_H21-19_O2-14 | 1.890 | 0.124 |
| Mean | Stdev |
14_O6-19_H41-14 | 1.972 | 0.167 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.964 | 0.092 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.898 | 0.127 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.959 | 0.157 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.996 | 0.223 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.003 | 0.130 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.920 | 0.149 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.966 | 0.095 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.886 | 0.125 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.975 | 0.159 |
| Mean | Stdev |
3_H3-30_N1-3 | 2.010 | 0.134 |
| Mean | Stdev |
3_O4-30_H61-3 | 1.953 | 0.166 |
| Mean | Stdev |
4_H41-29_O6-4 | 1.971 | 0.161 |
| Mean | Stdev |
4_N3-29_H1-4 | 1.965 | 0.096 |
| Mean | Stdev |
4_O2-29_H21-4 | 1.913 | 0.131 |
| Mean | Stdev |
5_H3-28_N1-5 | 1.984 | 0.129 |
| Mean | Stdev |
5_O4-28_H61-5 | 1.987 | 0.194 |
| Mean | Stdev |
6_H41-27_O6-6 | 1.953 | 0.152 |
| Mean | Stdev |
6_N3-27_H1-6 | 1.967 | 0.094 |
| Mean | Stdev |
6_O2-27_H21-6 | 1.907 | 0.132 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.976 | 0.167 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.973 | 0.096 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.909 | 0.135 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.963 | 0.121 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.026 | 0.217 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.022 | 0.215 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.969 | 0.120 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.7907 | 2.0933 |
1 | N3-H1_1-32 | 2.6381 | 1.8263 |
1 | O2-H21_1-32 | 2.5401 | 1.7815 |
2 | O6-H41_2-31 | 1.9748 | 0.1591 |
2 | H1-N3_2-31 | 1.9662 | 0.0952 |
2 | H21-O2_2-31 | 1.8858 | 0.1246 |
3 | H3-N1_3-30 | 2.0098 | 0.1342 |
3 | O4-H61_3-30 | 1.9530 | 0.1664 |
4 | H41-O6_4-29 | 1.9706 | 0.1608 |
4 | N3-H1_4-29 | 1.9652 | 0.0959 |
4 | O2-H21_4-29 | 1.9127 | 0.1314 |
5 | H3-N1_5-28 | 1.9835 | 0.1289 |
5 | O4-H61_5-28 | 1.9870 | 0.1935 |
6 | H41-O6_6-27 | 1.9531 | 0.1516 |
6 | N3-H1_6-27 | 1.9671 | 0.0943 |
6 | O2-H21_6-27 | 1.9072 | 0.1320 |
7 | H41-O6_7-26 | 1.9764 | 0.1670 |
7 | N3-H1_7-26 | 1.9733 | 0.0955 |
7 | O2-H21_7-26 | 1.9095 | 0.1352 |
8 | H3-N1_8-25 | 1.9631 | 0.1207 |
8 | O4-H61_8-25 | 2.0257 | 0.2172 |
9 | N1-H3_9-24 | 1.9688 | 0.1204 |
9 | H61-O4_9-24 | 2.0219 | 0.2152 |
10 | O6-H41_10-23 | 1.9661 | 0.1567 |
10 | H1-N3_10-23 | 1.9717 | 0.0911 |
10 | H21-O2_10-23 | 1.9103 | 0.1278 |
11 | H41-O6_11-22 | 1.9497 | 0.1491 |
11 | N3-H1_11-22 | 1.9649 | 0.0919 |
11 | O2-H21_11-22 | 1.9031 | 0.1263 |
12 | O6-H41_12-21 | 1.9575 | 0.1595 |
12 | H1-N3_12-21 | 1.9667 | 0.0941 |
12 | H21-O2_12-21 | 1.8786 | 0.1142 |
13 | N1-H3_13-20 | 1.9898 | 0.1272 |
13 | H61-O4_13-20 | 1.9666 | 0.1693 |
14 | O6-H41_14-19 | 1.9724 | 0.1670 |
14 | H1-N3_14-19 | 1.9528 | 0.0892 |
14 | H21-O2_14-19 | 1.8904 | 0.1238 |
15 | O6-H41_15-18 | 1.9586 | 0.1565 |
15 | H1-N3_15-18 | 1.9638 | 0.0921 |
15 | H21-O2_15-18 | 1.8978 | 0.1273 |
16 | H41-O6_16-17 | 1.9963 | 0.2227 |
16 | N3-H1_16-17 | 2.0029 | 0.1296 |
16 | O2-H21_16-17 | 1.9199 | 0.1493 |