Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
11 |
|
12 |
|
13 |
|
14 |
|
15 |
|
16 |
|
5' |
C |
- |
G |
- |
T |
- |
C |
- |
T |
- |
G |
- |
C |
- |
T |
- |
A |
- |
G |
- |
A |
- |
G |
- |
A |
- |
G |
- |
G |
- |
C |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
G |
- |
C |
- |
A |
- |
G |
- |
A |
- |
C |
- |
G |
- |
A |
- |
T |
- |
C |
- |
T |
- |
C |
- |
T |
- |
C |
- |
C |
- |
G |
5' |
|
32 |
|
31 |
|
30 |
|
29 |
|
28 |
|
27 |
|
26 |
|
25 |
|
24 |
|
23 |
|
22 |
|
21 |
|
20 |
|
19 |
|
18 |
|
17 |
|
Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.502 | 2.042 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.336 | 1.556 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.215 | 1.267 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.970 | 0.094 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.914 | 0.135 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.968 | 0.161 |
| Mean | Stdev |
11_H61-22_O4-11 | 1.982 | 0.182 |
| Mean | Stdev |
11_N1-22_H3-11 | 1.978 | 0.129 |
| Mean | Stdev |
12_H1-21_N3-12 | 1.965 | 0.097 |
| Mean | Stdev |
12_H21-21_O2-12 | 1.909 | 0.130 |
| Mean | Stdev |
12_O6-21_H41-12 | 1.970 | 0.169 |
| Mean | Stdev |
13_H61-20_O4-13 | 1.996 | 0.196 |
| Mean | Stdev |
13_N1-20_H3-13 | 1.986 | 0.126 |
| Mean | Stdev |
14_H1-19_N3-14 | 1.952 | 0.090 |
| Mean | Stdev |
14_H21-19_O2-14 | 1.883 | 0.117 |
| Mean | Stdev |
14_O6-19_H41-14 | 1.977 | 0.167 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.964 | 0.099 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.905 | 0.130 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.959 | 0.175 |
| Mean | Stdev |
16_H41-17_O6-16 | 2.430 | 1.456 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.251 | 0.888 |
| Mean | Stdev |
16_O2-17_H21-16 | 2.234 | 1.365 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.968 | 0.099 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.883 | 0.125 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.978 | 0.165 |
| Mean | Stdev |
3_H3-30_N1-3 | 2.006 | 0.135 |
| Mean | Stdev |
3_O4-30_H61-3 | 1.954 | 0.168 |
| Mean | Stdev |
4_H41-29_O6-4 | 1.972 | 0.163 |
| Mean | Stdev |
4_N3-29_H1-4 | 1.965 | 0.093 |
| Mean | Stdev |
4_O2-29_H21-4 | 1.910 | 0.130 |
| Mean | Stdev |
5_H3-28_N1-5 | 1.967 | 0.116 |
| Mean | Stdev |
5_O4-28_H61-5 | 2.006 | 0.194 |
| Mean | Stdev |
6_H1-27_N3-6 | 1.968 | 0.094 |
| Mean | Stdev |
6_H21-27_O2-6 | 1.891 | 0.121 |
| Mean | Stdev |
6_O6-27_H41-6 | 1.960 | 0.155 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.982 | 0.165 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.976 | 0.095 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.911 | 0.129 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.957 | 0.113 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.038 | 0.217 |
| Mean | Stdev |
9_H61-24_O4-9 | 1.998 | 0.203 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.981 | 0.130 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.5025 | 2.0422 |
1 | N3-H1_1-32 | 2.3361 | 1.5559 |
1 | O2-H21_1-32 | 2.2148 | 1.2671 |
2 | O6-H41_2-31 | 1.9777 | 0.1645 |
2 | H1-N3_2-31 | 1.9678 | 0.0989 |
2 | H21-O2_2-31 | 1.8835 | 0.1248 |
3 | H3-N1_3-30 | 2.0057 | 0.1350 |
3 | O4-H61_3-30 | 1.9538 | 0.1680 |
4 | H41-O6_4-29 | 1.9719 | 0.1625 |
4 | N3-H1_4-29 | 1.9647 | 0.0926 |
4 | O2-H21_4-29 | 1.9099 | 0.1299 |
5 | H3-N1_5-28 | 1.9673 | 0.1158 |
5 | O4-H61_5-28 | 2.0063 | 0.1938 |
6 | O6-H41_6-27 | 1.9599 | 0.1551 |
6 | H1-N3_6-27 | 1.9682 | 0.0943 |
6 | H21-O2_6-27 | 1.8913 | 0.1208 |
7 | H41-O6_7-26 | 1.9815 | 0.1652 |
7 | N3-H1_7-26 | 1.9763 | 0.0946 |
7 | O2-H21_7-26 | 1.9111 | 0.1290 |
8 | H3-N1_8-25 | 1.9567 | 0.1132 |
8 | O4-H61_8-25 | 2.0378 | 0.2170 |
9 | N1-H3_9-24 | 1.9808 | 0.1299 |
9 | H61-O4_9-24 | 1.9975 | 0.2033 |
10 | O6-H41_10-23 | 1.9679 | 0.1608 |
10 | H1-N3_10-23 | 1.9701 | 0.0943 |
10 | H21-O2_10-23 | 1.9144 | 0.1351 |
11 | N1-H3_11-22 | 1.9784 | 0.1286 |
11 | H61-O4_11-22 | 1.9818 | 0.1817 |
12 | O6-H41_12-21 | 1.9705 | 0.1685 |
12 | H1-N3_12-21 | 1.9653 | 0.0965 |
12 | H21-O2_12-21 | 1.9090 | 0.1296 |
13 | N1-H3_13-20 | 1.9856 | 0.1256 |
13 | H61-O4_13-20 | 1.9964 | 0.1964 |
14 | O6-H41_14-19 | 1.9769 | 0.1666 |
14 | H1-N3_14-19 | 1.9515 | 0.0900 |
14 | H21-O2_14-19 | 1.8832 | 0.1175 |
15 | O6-H41_15-18 | 1.9587 | 0.1753 |
15 | H1-N3_15-18 | 1.9636 | 0.0991 |
15 | H21-O2_15-18 | 1.9054 | 0.1297 |
16 | H41-O6_16-17 | 2.4299 | 1.4563 |
16 | N3-H1_16-17 | 2.2506 | 0.8884 |
16 | O2-H21_16-17 | 2.2343 | 1.3653 |