Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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G |
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A |
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G |
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G |
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C |
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T |
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A |
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G |
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A |
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C |
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T |
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C |
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G |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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C |
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T |
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C |
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C |
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G |
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A |
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T |
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C |
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T |
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G |
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A |
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G |
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C |
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G |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.687 | 2.431 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.599 | 2.334 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.524 | 2.436 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.967 | 0.096 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.911 | 0.132 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.980 | 0.172 |
| Mean | Stdev |
11_H61-22_O4-11 | 1.980 | 0.180 |
| Mean | Stdev |
11_N1-22_H3-11 | 1.987 | 0.126 |
| Mean | Stdev |
12_H41-21_O6-12 | 1.989 | 0.171 |
| Mean | Stdev |
12_N3-21_H1-12 | 1.960 | 0.093 |
| Mean | Stdev |
12_O2-21_H21-12 | 1.887 | 0.118 |
| Mean | Stdev |
13_H3-20_N1-13 | 1.973 | 0.118 |
| Mean | Stdev |
13_O4-20_H61-13 | 2.005 | 0.206 |
| Mean | Stdev |
14_H41-19_O6-14 | 1.966 | 0.158 |
| Mean | Stdev |
14_N3-19_H1-14 | 1.963 | 0.091 |
| Mean | Stdev |
14_O2-19_H21-14 | 1.882 | 0.121 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.973 | 0.094 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.901 | 0.127 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.950 | 0.149 |
| Mean | Stdev |
16_H41-17_O6-16 | 2.110 | 0.998 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.092 | 0.839 |
| Mean | Stdev |
16_O2-17_H21-16 | 2.033 | 1.025 |
| Mean | Stdev |
2_H1-31_N3-2 | 2.085 | 0.985 |
| Mean | Stdev |
2_H21-31_O2-2 | 2.029 | 1.105 |
| Mean | Stdev |
2_O6-31_H41-2 | 2.082 | 1.037 |
| Mean | Stdev |
3_H1-30_N3-3 | 1.974 | 0.094 |
| Mean | Stdev |
3_H21-30_O2-3 | 1.914 | 0.132 |
| Mean | Stdev |
3_O6-30_H41-3 | 1.958 | 0.158 |
| Mean | Stdev |
4_H61-29_O4-4 | 1.996 | 0.192 |
| Mean | Stdev |
4_N1-29_H3-4 | 1.975 | 0.119 |
| Mean | Stdev |
5_H1-28_N3-5 | 1.957 | 0.093 |
| Mean | Stdev |
5_H21-28_O2-5 | 1.890 | 0.121 |
| Mean | Stdev |
5_O6-28_H41-5 | 1.982 | 0.171 |
| Mean | Stdev |
6_H1-27_N3-6 | 1.962 | 0.093 |
| Mean | Stdev |
6_H21-27_O2-6 | 1.906 | 0.126 |
| Mean | Stdev |
6_O6-27_H41-6 | 1.961 | 0.171 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.994 | 0.169 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.972 | 0.094 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.904 | 0.126 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.960 | 0.113 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.033 | 0.207 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.006 | 0.211 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.988 | 0.133 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.6874 | 2.4313 |
1 | N3-H1_1-32 | 2.5994 | 2.3341 |
1 | O2-H21_1-32 | 2.5242 | 2.4364 |
2 | O6-H41_2-31 | 2.0815 | 1.0371 |
2 | H1-N3_2-31 | 2.0851 | 0.9850 |
2 | H21-O2_2-31 | 2.0291 | 1.1048 |
3 | O6-H41_3-30 | 1.9584 | 0.1575 |
3 | H1-N3_3-30 | 1.9740 | 0.0943 |
3 | H21-O2_3-30 | 1.9142 | 0.1323 |
4 | N1-H3_4-29 | 1.9750 | 0.1194 |
4 | H61-O4_4-29 | 1.9955 | 0.1923 |
5 | O6-H41_5-28 | 1.9819 | 0.1714 |
5 | H1-N3_5-28 | 1.9568 | 0.0927 |
5 | H21-O2_5-28 | 1.8900 | 0.1209 |
6 | O6-H41_6-27 | 1.9606 | 0.1705 |
6 | H1-N3_6-27 | 1.9623 | 0.0935 |
6 | H21-O2_6-27 | 1.9058 | 0.1264 |
7 | H41-O6_7-26 | 1.9941 | 0.1694 |
7 | N3-H1_7-26 | 1.9716 | 0.0940 |
7 | O2-H21_7-26 | 1.9041 | 0.1261 |
8 | H3-N1_8-25 | 1.9600 | 0.1131 |
8 | O4-H61_8-25 | 2.0330 | 0.2075 |
9 | N1-H3_9-24 | 1.9875 | 0.1332 |
9 | H61-O4_9-24 | 2.0061 | 0.2114 |
10 | O6-H41_10-23 | 1.9800 | 0.1723 |
10 | H1-N3_10-23 | 1.9672 | 0.0962 |
10 | H21-O2_10-23 | 1.9106 | 0.1320 |
11 | N1-H3_11-22 | 1.9868 | 0.1258 |
11 | H61-O4_11-22 | 1.9800 | 0.1804 |
12 | H41-O6_12-21 | 1.9889 | 0.1708 |
12 | N3-H1_12-21 | 1.9597 | 0.0927 |
12 | O2-H21_12-21 | 1.8872 | 0.1185 |
13 | H3-N1_13-20 | 1.9728 | 0.1182 |
13 | O4-H61_13-20 | 2.0050 | 0.2060 |
14 | H41-O6_14-19 | 1.9660 | 0.1575 |
14 | N3-H1_14-19 | 1.9629 | 0.0910 |
14 | O2-H21_14-19 | 1.8819 | 0.1210 |
15 | O6-H41_15-18 | 1.9497 | 0.1493 |
15 | H1-N3_15-18 | 1.9726 | 0.0939 |
15 | H21-O2_15-18 | 1.9006 | 0.1273 |
16 | H41-O6_16-17 | 2.1101 | 0.9976 |
16 | N3-H1_16-17 | 2.0918 | 0.8388 |
16 | O2-H21_16-17 | 2.0328 | 1.0253 |