Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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G |
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A |
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G |
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T |
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C |
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T |
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A |
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G |
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A |
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C |
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T |
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C |
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G |
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C |
3' |
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x |
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3' |
G |
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C |
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C |
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T |
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C |
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A |
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G |
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A |
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T |
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C |
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T |
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G |
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A |
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G |
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G |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 3.227 | 2.599 |
| Mean | Stdev |
1_N3-32_H1-1 | 3.127 | 2.463 |
| Mean | Stdev |
1_O2-32_H21-1 | 3.076 | 2.527 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.972 | 0.096 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.914 | 0.134 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.990 | 0.170 |
| Mean | Stdev |
11_H61-22_O4-11 | 1.985 | 0.182 |
| Mean | Stdev |
11_N1-22_H3-11 | 1.983 | 0.126 |
| Mean | Stdev |
12_H41-21_O6-12 | 1.999 | 0.175 |
| Mean | Stdev |
12_N3-21_H1-12 | 1.963 | 0.097 |
| Mean | Stdev |
12_O2-21_H21-12 | 1.889 | 0.123 |
| Mean | Stdev |
13_H3-20_N1-13 | 1.967 | 0.118 |
| Mean | Stdev |
13_O4-20_H61-13 | 2.003 | 0.193 |
| Mean | Stdev |
14_H41-19_O6-14 | 1.962 | 0.156 |
| Mean | Stdev |
14_N3-19_H1-14 | 1.963 | 0.091 |
| Mean | Stdev |
14_O2-19_H21-14 | 1.877 | 0.118 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.968 | 0.090 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.897 | 0.124 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.944 | 0.143 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.976 | 0.190 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.001 | 0.115 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.928 | 0.149 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.967 | 0.107 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.890 | 0.125 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.960 | 0.203 |
| Mean | Stdev |
3_H1-30_N3-3 | 1.974 | 0.095 |
| Mean | Stdev |
3_H21-30_O2-3 | 1.915 | 0.136 |
| Mean | Stdev |
3_O6-30_H41-3 | 1.966 | 0.163 |
| Mean | Stdev |
4_H61-29_O4-4 | 2.022 | 0.208 |
| Mean | Stdev |
4_N1-29_H3-4 | 1.954 | 0.109 |
| Mean | Stdev |
5_H1-28_N3-5 | 1.964 | 0.096 |
| Mean | Stdev |
5_H21-28_O2-5 | 1.889 | 0.123 |
| Mean | Stdev |
5_O6-28_H41-5 | 1.992 | 0.170 |
| Mean | Stdev |
6_H3-27_N1-6 | 1.985 | 0.126 |
| Mean | Stdev |
6_O4-27_H61-6 | 1.977 | 0.183 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.978 | 0.161 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.965 | 0.094 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.912 | 0.133 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.978 | 0.127 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.017 | 0.218 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.094 | 0.512 |
| Mean | Stdev |
9_N1-24_H3-9 | 2.041 | 0.465 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 3.2267 | 2.5988 |
1 | N3-H1_1-32 | 3.1271 | 2.4626 |
1 | O2-H21_1-32 | 3.0761 | 2.5270 |
2 | O6-H41_2-31 | 1.9601 | 0.2033 |
2 | H1-N3_2-31 | 1.9670 | 0.1074 |
2 | H21-O2_2-31 | 1.8898 | 0.1252 |
3 | O6-H41_3-30 | 1.9663 | 0.1629 |
3 | H1-N3_3-30 | 1.9735 | 0.0949 |
3 | H21-O2_3-30 | 1.9155 | 0.1357 |
4 | N1-H3_4-29 | 1.9540 | 0.1090 |
4 | H61-O4_4-29 | 2.0217 | 0.2080 |
5 | O6-H41_5-28 | 1.9923 | 0.1695 |
5 | H1-N3_5-28 | 1.9636 | 0.0956 |
5 | H21-O2_5-28 | 1.8886 | 0.1228 |
6 | H3-N1_6-27 | 1.9846 | 0.1259 |
6 | O4-H61_6-27 | 1.9770 | 0.1829 |
7 | H41-O6_7-26 | 1.9782 | 0.1612 |
7 | N3-H1_7-26 | 1.9654 | 0.0937 |
7 | O2-H21_7-26 | 1.9121 | 0.1333 |
8 | H3-N1_8-25 | 1.9781 | 0.1273 |
8 | O4-H61_8-25 | 2.0172 | 0.2183 |
9 | N1-H3_9-24 | 2.0412 | 0.4651 |
9 | H61-O4_9-24 | 2.0938 | 0.5120 |
10 | O6-H41_10-23 | 1.9904 | 0.1704 |
10 | H1-N3_10-23 | 1.9724 | 0.0964 |
10 | H21-O2_10-23 | 1.9138 | 0.1343 |
11 | N1-H3_11-22 | 1.9829 | 0.1263 |
11 | H61-O4_11-22 | 1.9850 | 0.1818 |
12 | H41-O6_12-21 | 1.9992 | 0.1755 |
12 | N3-H1_12-21 | 1.9630 | 0.0974 |
12 | O2-H21_12-21 | 1.8892 | 0.1227 |
13 | H3-N1_13-20 | 1.9671 | 0.1176 |
13 | O4-H61_13-20 | 2.0027 | 0.1934 |
14 | H41-O6_14-19 | 1.9624 | 0.1560 |
14 | N3-H1_14-19 | 1.9629 | 0.0909 |
14 | O2-H21_14-19 | 1.8768 | 0.1185 |
15 | O6-H41_15-18 | 1.9440 | 0.1434 |
15 | H1-N3_15-18 | 1.9680 | 0.0900 |
15 | H21-O2_15-18 | 1.8975 | 0.1244 |
16 | H41-O6_16-17 | 1.9756 | 0.1900 |
16 | N3-H1_16-17 | 2.0012 | 0.1151 |
16 | O2-H21_16-17 | 1.9281 | 0.1492 |