Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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2 |
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3 |
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8 |
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9 |
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11 |
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12 |
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13 |
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14 |
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16 |
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5' |
C |
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G |
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G |
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C |
3' |
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3' |
G |
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T |
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T |
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G |
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5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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19 |
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18 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 3.583 | 2.888 |
| Mean | Stdev |
1_N3-32_H1-1 | 3.536 | 2.873 |
| Mean | Stdev |
1_O2-32_H21-1 | 3.530 | 3.006 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.964 | 0.093 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.917 | 0.133 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.982 | 0.163 |
| Mean | Stdev |
11_H61-22_O4-11 | 2.010 | 0.185 |
| Mean | Stdev |
11_N1-22_H3-11 | 1.983 | 0.122 |
| Mean | Stdev |
12_H3-21_N1-12 | 1.978 | 0.119 |
| Mean | Stdev |
12_O4-21_H61-12 | 2.018 | 0.192 |
| Mean | Stdev |
13_H61-20_O4-13 | 2.051 | 0.216 |
| Mean | Stdev |
13_N1-20_H3-13 | 1.974 | 0.120 |
| Mean | Stdev |
14_H3-19_N1-14 | 1.974 | 0.115 |
| Mean | Stdev |
14_O4-19_H61-14 | 2.015 | 0.189 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.971 | 0.096 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.892 | 0.123 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.958 | 0.159 |
| Mean | Stdev |
16_H41-17_O6-16 | 2.648 | 2.045 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.606 | 1.821 |
| Mean | Stdev |
16_O2-17_H21-16 | 2.706 | 2.450 |
| Mean | Stdev |
2_H1-31_N3-2 | 2.002 | 0.417 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.921 | 0.425 |
| Mean | Stdev |
2_O6-31_H41-2 | 2.015 | 0.514 |
| Mean | Stdev |
3_H61-30_O4-3 | 2.003 | 0.181 |
| Mean | Stdev |
3_N1-30_H3-3 | 1.998 | 0.128 |
| Mean | Stdev |
4_H3-29_N1-4 | 1.972 | 0.114 |
| Mean | Stdev |
4_O4-29_H61-4 | 2.044 | 0.213 |
| Mean | Stdev |
5_H61-28_O4-5 | 2.023 | 0.199 |
| Mean | Stdev |
5_N1-28_H3-5 | 1.975 | 0.118 |
| Mean | Stdev |
6_H3-27_N1-6 | 1.986 | 0.125 |
| Mean | Stdev |
6_O4-27_H61-6 | 2.007 | 0.188 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.984 | 0.166 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.966 | 0.093 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.916 | 0.140 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.972 | 0.124 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.026 | 0.221 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.035 | 0.223 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.966 | 0.120 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 3.5835 | 2.8881 |
1 | N3-H1_1-32 | 3.5356 | 2.8729 |
1 | O2-H21_1-32 | 3.5295 | 3.0062 |
2 | O6-H41_2-31 | 2.0152 | 0.5137 |
2 | H1-N3_2-31 | 2.0019 | 0.4168 |
2 | H21-O2_2-31 | 1.9209 | 0.4246 |
3 | N1-H3_3-30 | 1.9982 | 0.1283 |
3 | H61-O4_3-30 | 2.0032 | 0.1808 |
4 | H3-N1_4-29 | 1.9717 | 0.1144 |
4 | O4-H61_4-29 | 2.0436 | 0.2131 |
5 | N1-H3_5-28 | 1.9754 | 0.1181 |
5 | H61-O4_5-28 | 2.0232 | 0.1994 |
6 | H3-N1_6-27 | 1.9857 | 0.1246 |
6 | O4-H61_6-27 | 2.0070 | 0.1879 |
7 | H41-O6_7-26 | 1.9838 | 0.1662 |
7 | N3-H1_7-26 | 1.9664 | 0.0926 |
7 | O2-H21_7-26 | 1.9163 | 0.1395 |
8 | H3-N1_8-25 | 1.9722 | 0.1241 |
8 | O4-H61_8-25 | 2.0257 | 0.2205 |
9 | N1-H3_9-24 | 1.9661 | 0.1203 |
9 | H61-O4_9-24 | 2.0346 | 0.2229 |
10 | O6-H41_10-23 | 1.9821 | 0.1626 |
10 | H1-N3_10-23 | 1.9644 | 0.0926 |
10 | H21-O2_10-23 | 1.9166 | 0.1334 |
11 | N1-H3_11-22 | 1.9833 | 0.1221 |
11 | H61-O4_11-22 | 2.0104 | 0.1855 |
12 | H3-N1_12-21 | 1.9782 | 0.1191 |
12 | O4-H61_12-21 | 2.0179 | 0.1922 |
13 | N1-H3_13-20 | 1.9738 | 0.1203 |
13 | H61-O4_13-20 | 2.0510 | 0.2159 |
14 | H3-N1_14-19 | 1.9740 | 0.1147 |
14 | O4-H61_14-19 | 2.0148 | 0.1890 |
15 | O6-H41_15-18 | 1.9579 | 0.1585 |
15 | H1-N3_15-18 | 1.9709 | 0.0957 |
15 | H21-O2_15-18 | 1.8921 | 0.1227 |
16 | H41-O6_16-17 | 2.6479 | 2.0453 |
16 | N3-H1_16-17 | 2.6060 | 1.8207 |
16 | O2-H21_16-17 | 2.7062 | 2.4501 |