Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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G |
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G |
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G |
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G |
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C |
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T |
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A |
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G |
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G |
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G |
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G |
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G |
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G |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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C |
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C |
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C |
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C |
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C |
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G |
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A |
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T |
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C |
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C |
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C |
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C |
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C |
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C |
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G |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 4.010 | 3.053 |
| Mean | Stdev |
1_N3-32_H1-1 | 3.919 | 2.976 |
| Mean | Stdev |
1_O2-32_H21-1 | 3.907 | 3.092 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.968 | 0.094 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.897 | 0.126 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.979 | 0.165 |
| Mean | Stdev |
11_H1-22_N3-11 | 1.964 | 0.094 |
| Mean | Stdev |
11_H21-22_O2-11 | 1.900 | 0.128 |
| Mean | Stdev |
11_O6-22_H41-11 | 1.958 | 0.166 |
| Mean | Stdev |
12_H1-21_N3-12 | 1.967 | 0.093 |
| Mean | Stdev |
12_H21-21_O2-12 | 1.894 | 0.125 |
| Mean | Stdev |
12_O6-21_H41-12 | 1.960 | 0.158 |
| Mean | Stdev |
13_H1-20_N3-13 | 1.969 | 0.093 |
| Mean | Stdev |
13_H21-20_O2-13 | 1.893 | 0.123 |
| Mean | Stdev |
13_O6-20_H41-13 | 1.958 | 0.161 |
| Mean | Stdev |
14_H1-19_N3-14 | 1.963 | 0.094 |
| Mean | Stdev |
14_H21-19_O2-14 | 1.893 | 0.124 |
| Mean | Stdev |
14_O6-19_H41-14 | 1.953 | 0.159 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.966 | 0.093 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.897 | 0.127 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.952 | 0.149 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.994 | 0.213 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.002 | 0.119 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.920 | 0.149 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.970 | 0.141 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.893 | 0.150 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.975 | 0.273 |
| Mean | Stdev |
3_H1-30_N3-3 | 1.970 | 0.098 |
| Mean | Stdev |
3_H21-30_O2-3 | 1.908 | 0.129 |
| Mean | Stdev |
3_O6-30_H41-3 | 1.960 | 0.164 |
| Mean | Stdev |
4_H1-29_N3-4 | 1.965 | 0.094 |
| Mean | Stdev |
4_H21-29_O2-4 | 1.902 | 0.129 |
| Mean | Stdev |
4_O6-29_H41-4 | 1.954 | 0.157 |
| Mean | Stdev |
5_H1-28_N3-5 | 1.963 | 0.091 |
| Mean | Stdev |
5_H21-28_O2-5 | 1.895 | 0.123 |
| Mean | Stdev |
5_O6-28_H41-5 | 1.960 | 0.161 |
| Mean | Stdev |
6_H1-27_N3-6 | 1.961 | 0.091 |
| Mean | Stdev |
6_H21-27_O2-6 | 1.901 | 0.121 |
| Mean | Stdev |
6_O6-27_H41-6 | 1.953 | 0.151 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.986 | 0.163 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.971 | 0.093 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.904 | 0.127 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.963 | 0.117 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.029 | 0.214 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.030 | 0.293 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.980 | 0.186 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 4.0102 | 3.0529 |
1 | N3-H1_1-32 | 3.9194 | 2.9756 |
1 | O2-H21_1-32 | 3.9070 | 3.0920 |
2 | O6-H41_2-31 | 1.9750 | 0.2733 |
2 | H1-N3_2-31 | 1.9699 | 0.1409 |
2 | H21-O2_2-31 | 1.8928 | 0.1505 |
3 | O6-H41_3-30 | 1.9604 | 0.1643 |
3 | H1-N3_3-30 | 1.9698 | 0.0983 |
3 | H21-O2_3-30 | 1.9078 | 0.1293 |
4 | O6-H41_4-29 | 1.9544 | 0.1574 |
4 | H1-N3_4-29 | 1.9650 | 0.0940 |
4 | H21-O2_4-29 | 1.9018 | 0.1288 |
5 | O6-H41_5-28 | 1.9595 | 0.1614 |
5 | H1-N3_5-28 | 1.9630 | 0.0915 |
5 | H21-O2_5-28 | 1.8954 | 0.1230 |
6 | O6-H41_6-27 | 1.9531 | 0.1514 |
6 | H1-N3_6-27 | 1.9608 | 0.0915 |
6 | H21-O2_6-27 | 1.9010 | 0.1212 |
7 | H41-O6_7-26 | 1.9862 | 0.1634 |
7 | N3-H1_7-26 | 1.9712 | 0.0928 |
7 | O2-H21_7-26 | 1.9040 | 0.1267 |
8 | H3-N1_8-25 | 1.9626 | 0.1165 |
8 | O4-H61_8-25 | 2.0293 | 0.2142 |
9 | N1-H3_9-24 | 1.9803 | 0.1856 |
9 | H61-O4_9-24 | 2.0305 | 0.2930 |
10 | O6-H41_10-23 | 1.9791 | 0.1648 |
10 | H1-N3_10-23 | 1.9684 | 0.0936 |
10 | H21-O2_10-23 | 1.8974 | 0.1262 |
11 | O6-H41_11-22 | 1.9577 | 0.1661 |
11 | H1-N3_11-22 | 1.9644 | 0.0938 |
11 | H21-O2_11-22 | 1.9003 | 0.1277 |
12 | O6-H41_12-21 | 1.9602 | 0.1577 |
12 | H1-N3_12-21 | 1.9669 | 0.0930 |
12 | H21-O2_12-21 | 1.8940 | 0.1247 |
13 | O6-H41_13-20 | 1.9575 | 0.1611 |
13 | H1-N3_13-20 | 1.9690 | 0.0929 |
13 | H21-O2_13-20 | 1.8926 | 0.1234 |
14 | O6-H41_14-19 | 1.9532 | 0.1593 |
14 | H1-N3_14-19 | 1.9627 | 0.0936 |
14 | H21-O2_14-19 | 1.8930 | 0.1239 |
15 | O6-H41_15-18 | 1.9521 | 0.1487 |
15 | H1-N3_15-18 | 1.9658 | 0.0932 |
15 | H21-O2_15-18 | 1.8968 | 0.1267 |
16 | H41-O6_16-17 | 1.9945 | 0.2127 |
16 | N3-H1_16-17 | 2.0018 | 0.1190 |
16 | O2-H21_16-17 | 1.9201 | 0.1488 |